Variable-order reference-free variant discovery with the Burrows-Wheeler Transform
Prezza, Nicola, Pisanti, Nadia, Sciortino, Marinella, Rosone, Giovanna
Published in BMC bioinformatics (16.09.2020)
Published in BMC bioinformatics (16.09.2020)
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Journal Article
SNPs detection by eBWT positional clustering
Prezza, Nicola, Pisanti, Nadia, Sciortino, Marinella, Rosone, Giovanna
Published in Algorithms for molecular biology (06.02.2019)
Published in Algorithms for molecular biology (06.02.2019)
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Journal Article
Pattern Masking for Dictionary Matching: Theory and Practice
Charalampopoulos, Panagiotis, Chen, Huiping, Christen, Peter, Loukides, Grigorios, Pisanti, Nadia, Pissis, Solon P., Radoszewski, Jakub
Published in Algorithmica (01.06.2024)
Published in Algorithmica (01.06.2024)
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Journal Article
Editorial: Special Issue on International Workshop on Combinatorial Algorithms (IWOCA 2019)
Pisanti, Nadia, Colbourn, Charles, Grossi, Roberto
Published in Theory of computing systems (01.10.2020)
Published in Theory of computing systems (01.10.2020)
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Journal Article
Defining TCRγδ lymphoproliferative disorders by combined immunophenotypic and molecular evaluation
Teramo, Antonella, Binatti, Andrea, Ciabatti, Elena, Schiavoni, Gianluca, Tarrini, Giulia, Barilà, Gregorio, Calabretto, Giulia, Vicenzetto, Cristina, Gasparini, Vanessa Rebecca, Facco, Monica, Petrini, Iacopo, Grossi, Roberto, Pisanti, Nadia, Bortoluzzi, Stefania, Falini, Brunangelo, Tiacci, Enrico, Galimberti, Sara, Semenzato, Gianpietro, Zambello, Renato
Published in Nature communications (08.06.2022)
Published in Nature communications (08.06.2022)
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Journal Article
Motif trie: An efficient text index for pattern discovery with don't cares
Grossi, Roberto, Menconi, Giulia, Pisanti, Nadia, Trani, Roberto, Vind, Søren
Published in Theoretical computer science (01.02.2018)
Published in Theoretical computer science (01.02.2018)
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Journal Article
Pangenome comparison via ED strings
Gabory, Esteban, Mwaniki, Moses Njagi, Pisanti, Nadia, Pissis, Solon P., Radoszewski, Jakub, Sweering, Michelle, Zuba, Wiktor
Published in Frontiers in bioinformatics (26.09.2024)
Published in Frontiers in bioinformatics (26.09.2024)
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Journal Article
Circular Sequence Comparison with q-grams
Grossi, Roberto, Iliopoulos, Costas S., Mercaş, Robert, Pisanti, Nadia, Pissis, Solon P., Retha, Ahmad, Vayani, Fatima
Published in Algorithms in Bioinformatics (2015)
Published in Algorithms in Bioinformatics (2015)
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Book Chapter
Approximate pattern matching on elastic-degenerate text
Bernardini, Giulia, Pisanti, Nadia, Pissis, Solon P., Rosone, Giovanna
Published in Theoretical computer science (06.04.2020)
Published in Theoretical computer science (06.04.2020)
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Journal Article
HapCol: accurate and memory-efficient haplotype assembly from long reads
Pirola, Yuri, Zaccaria, Simone, Dondi, Riccardo, Klau, Gunnar W, Pisanti, Nadia, Bonizzoni, Paola
Published in Bioinformatics (01.06.2016)
Published in Bioinformatics (01.06.2016)
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Journal Article
Preface
Mercaş, Robert, Pisanti, Nadia
Published in Journal of discrete algorithms (Amsterdam, Netherlands) (01.01.2017)
Published in Journal of discrete algorithms (Amsterdam, Netherlands) (01.01.2017)
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Journal Article
Hide and Mine in Strings: Hardness, Algorithms, and Experiments
Bernardini, Giulia, Conte, Alessio, Gourdel, Garance, Grossi, Roberto, Loukides, Grigorios, Pisanti, Nadia, Pissis, Solon P., Punzi, Giulia, Stougie, Leen, Sweering, Michelle
Published in IEEE transactions on knowledge and data engineering (01.06.2023)
Published in IEEE transactions on knowledge and data engineering (01.06.2023)
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Journal Article
PWHATSHAP: efficient haplotyping for future generation sequencing
Bracciali, Andrea, Aldinucci, Marco, Patterson, Murray, Marschall, Tobias, Pisanti, Nadia, Merelli, Ivan, Torquati, Massimo
Published in BMC bioinformatics (22.09.2016)
Published in BMC bioinformatics (22.09.2016)
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Journal Article