Progressive Loss of Function in a Limb Enhancer during Snake Evolution
Kvon, Evgeny Z., Kamneva, Olga K., Melo, Uirá S., Barozzi, Iros, Osterwalder, Marco, Mannion, Brandon J., Tissières, Virginie, Pickle, Catherine S., Plajzer-Frick, Ingrid, Lee, Elizabeth A., Kato, Momoe, Garvin, Tyler H., Akiyama, Jennifer A., Afzal, Veena, Lopez-Rios, Javier, Rubin, Edward M., Dickel, Diane E., Pennacchio, Len A., Visel, Axel
Published in Cell (20.10.2016)
Published in Cell (20.10.2016)
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Ultraconserved Enhancers Are Required for Normal Development
Dickel, Diane E., Ypsilanti, Athena R., Pla, Ramón, Zhu, Yiwen, Barozzi, Iros, Mannion, Brandon J., Khin, Yupar S., Fukuda-Yuzawa, Yoko, Plajzer-Frick, Ingrid, Pickle, Catherine S., Lee, Elizabeth A., Harrington, Anne N., Pham, Quan T., Garvin, Tyler H., Kato, Momoe, Osterwalder, Marco, Akiyama, Jennifer A., Afzal, Veena, Rubenstein, John L.R., Pennacchio, Len A., Visel, Axel
Published in Cell (25.01.2018)
Published in Cell (25.01.2018)
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Targeted Genome Editing Across Species Using ZFNs and TALENs
Wood, Andrew J., Lo, Te-Wen, Zeitler, Bryan, Pickle, Catherine S., Ralston, Edward J., Lee, Andrew H., Amora, Rainier, Miller, Jeffrey C., Leung, Elo, Meng, Xiangdong, Zhang, Lei, Rebar, Edward J., Gregory, Philip D., Urnov, Fyodor D., Meyer, Barbara J.
Published in Science (American Association for the Advancement of Science) (15.07.2011)
Published in Science (American Association for the Advancement of Science) (15.07.2011)
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Precise and heritable genome editing in evolutionarily diverse nematodes using TALENs and CRISPR/Cas9 to engineer insertions and deletions
Lo, Te-Wen, Pickle, Catherine S, Lin, Steven, Ralston, Edward J, Gurling, Mark, Schartner, Caitlin M, Bian, Qian, Doudna, Jennifer A, Meyer, Barbara J
Published in Genetics (Austin) (01.10.2013)
Published in Genetics (Austin) (01.10.2013)
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Genome-wide compendium and functional assessment of in vivo heart enhancers
Dickel, Diane E, Barozzi, Iros, Zhu, Yiwen, Fukuda-Yuzawa, Yoko, Osterwalder, Marco, Mannion, Brandon J, May, Dalit, Spurrell, Cailyn H, Plajzer-Frick, Ingrid, Pickle, Catherine S, Lee, Elizabeth, Garvin, Tyler H, Kato, Momoe, Akiyama, Jennifer A, Afzal, Veena, Lee, Ah Young, Gorkin, David U, Ren, Bing, Rubin, Edward M, Visel, Axel, Pennacchio, Len A
Published in Nature communications (05.10.2016)
Published in Nature communications (05.10.2016)
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Enhancer redundancy provides phenotypic robustness in mammalian development
Osterwalder, Marco, Barozzi, Iros, Tissières, Virginie, Fukuda-Yuzawa, Yoko, Mannion, Brandon J, Afzal, Sarah Y, Lee, Elizabeth A, Zhu, Yiwen, Plajzer-Frick, Ingrid, Pickle, Catherine S, Kato, Momoe, Garvin, Tyler H, Pham, Quan T, Harrington, Anne N, Akiyama, Jennifer A, Afzal, Veena, Lopez-Rios, Javier, Dickel, Diane E, Visel, Axel, Pennacchio, Len A
Published in Nature (London) (08.02.2018)
Published in Nature (London) (08.02.2018)
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Limb-Enhancer Genie: An accessible resource of accurate enhancer predictions in the developing limb
Monti, Remo, Barozzi, Iros, Osterwalder, Marco, Lee, Elizabeth, Kato, Momoe, Garvin, Tyler H, Plajzer-Frick, Ingrid, Pickle, Catherine S, Akiyama, Jennifer A, Afzal, Veena, Beerenwinkel, Niko, Dickel, Diane E, Visel, Axel, Pennacchio, Len A
Published in PLoS computational biology (01.08.2017)
Published in PLoS computational biology (01.08.2017)
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A condensin-like dosage compensation complex acts at a distance to control expression throughout the genome
Jans, Judith, Gladden, John M, Ralston, Edward J, Pickle, Catherine S, Michel, Agnès H, Pferdehirt, Rebecca R, Eisen, Michael B, Meyer, Barbara J
Published in Genes & development (01.03.2009)
Published in Genes & development (01.03.2009)
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Journal Article
Enhancer Redundancy Allows for Phenotypic Robustness in Mammalian Development
Osterwalder, Marco, Barozzi, Iros, Tissières, Virginie, Fukuda-Yuzawa, Yoko, Mannion, Brandon J., Afzal, Sarah Y., Lee, Elizabeth A., Zhu, Yiwen, Plajzer-Frick, Ingrid, Pickle, Catherine S., Kato, Momoe, Garvin, Tyler H., Pham, Quan T., Harrington, Anne N., Akiyama, Jennifer A., Afzal, Veena, Lopez-Rios, Javier, Dickel, Diane E., Visel, Axel, Pennacchio, Len A.
Published in Nature (London) (31.01.2018)
Published in Nature (London) (31.01.2018)
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Journal Article
Ultraconserved Enhancers Are Required for Normal Development
Dickel, Diane E., Ypsilanti, Athena R., Pla, Ramón, Zhu, Yiwen, Barozzi, Iros, Mannion, Brandon J., Khin, Yupar S., Fukuda-Yuzawa, Yoko, Plajzer-Frick, Ingrid, Pickle, Catherine S., Lee, Elizabeth A., Harrington, Anne N., Pham, Quan T., Garvin, Tyler H., Kato, Momoe, Osterwalder, Marco, Akiyama, Jennifer A., Afzal, Veena, Rubenstein, John L. R., Pennacchio, Len A., Visel, Axel
Published in Cell (01.01.2018)
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Published in Cell (01.01.2018)
Journal Article
Progressive Loss of Function in a Limb Enhancer during Snake Evolution
Kvon, Evgeny Z., Kamneva, Olga K., Melo, Uirá S., Barozzi, Iros, Osterwalder, Marco, Mannion, Brandon J., Tissières, Virginie, Pickle, Catherine S., Plajzer-Frick, Ingrid, Lee, Elizabeth A., Kato, Momoe, Garvin, Tyler H., Akiyama, Jennifer A., Afzal, Veena, Lopez-Rios, Javier, Rubin, Edward M., Dickel, Diane E., Pennacchio, Len A., Visel, Axel
Published in Cell (01.10.2016)
Published in Cell (01.10.2016)
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A Dempster-Shafer approach to multi-sensor track association
Testa, Loretta A., Pickle, Catherine Durand, Blackman, Samuel S.
Published in 2016 IEEE Aerospace Conference (01.03.2016)
Published in 2016 IEEE Aerospace Conference (01.03.2016)
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Conference Proceeding
Application of MHT to through the wall radar tracking
Blackman, Samuel S., Tyler, Douglas, Pickle, Catherine Durand
Published in 2013 IEEE Aerospace Conference (01.03.2013)
Published in 2013 IEEE Aerospace Conference (01.03.2013)
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Conference Proceeding
A cross-organism framework for supervised enhancer prediction with epigenetic pattern recognition and targeted validation
Sethi, Anurag, Gu, Mengting, Gumusgoz, Emrah, Chan, Landon, Koon-Kiu Yan, Rozowsky, Joel S, Barozzi, Iros, Afzal, Veena, Akiyama, Jennifer, Plajzer-Frick, Ingrid, Yan, Chengfei, Pickle, Catherine, Kato, Momoe, Garvin, Tyler, Pham, Quan, Harrington, Anne, Mannion, Brandon, Lee, Elizabeth, Fukuda-Yuzawa, Yoko, Visel, Axel, Dickle, Diane E, Yip, Kevin, Sutton, Richard, Pennacchio, Len A, Gerstein, Mark
Published in bioRxiv (05.08.2018)
Published in bioRxiv (05.08.2018)
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Paper
Systematic mapping of chromatin state landscapes during mouse development
Gorkin, David, Barozzi, Iros, Zhang, Yanxiao, Ah Young Lee, Lee, Bin, Zhao, Yuan, Wildberg, Andre, Ding, Bo, Zhang, Bo, Wang, Mengchi, Strattan, J Seth, Davidson, Jean M, Qiu, Yunjiang, Afzal, Veena, Akiyama, Jennifer A, Plajzer-Frick, Ingrid, Pickle, Catherine S, Kato, Momoe, Garvin, Tyler H, Pham, Quan T, Harrington, Anne N, Mannion, Brandon J, Lee, Elizabeth A, Fukuda-Yuzawa, Yoko, He, Yupeng, Preissl, Sebastian, Chee, Sora, Williams, Brian A, Trout, Diane, Amrhein, Henry, Yang, Hongbo, Cherry, J Michael, Shen, Yin, Ecker, Joseph R, Wang, Wei, Dickel, Diane E, Visel, Axel, Pennacchio, Len A, Ren, Bing
Published in bioRxiv (03.08.2017)
Published in bioRxiv (03.08.2017)
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Paper