A hierarchical attention network integrating multi-scale relationship for drug response prediction
Wang, Xiaoqi, Wen, Yuqi, Zhang, Yixin, Dai, Chong, Yang, Yaning, Bo, Xiaochen, He, Song, Peng, Shaoliang
Published in Information fusion (01.10.2024)
Published in Information fusion (01.10.2024)
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Journal Article
paraGSEA: a scalable approach for large-scale gene expression profiling
Peng, Shaoliang, Yang, Shunyun, Bo, Xiaochen, Li, Fei
Published in Nucleic acids research (29.09.2017)
Published in Nucleic acids research (29.09.2017)
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Journal Article
SELECTOR: Heterogeneous graph network with convolutional masked autoencoder for multimodal robust prediction of cancer survival
Pan, Liangrui, Peng, Yijun, Li, Yan, Wang, Xiang, Liu, Wenjuan, Xu, Liwen, Liang, Qingchun, Peng, Shaoliang
Published in Computers in biology and medicine (01.04.2024)
Published in Computers in biology and medicine (01.04.2024)
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Journal Article
Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework
Su, Wenhe, Liao, Xiangke, Lu, Yutong, Zou, Quan, Peng, Shaoliang
Published in Journal of computational biology (01.12.2017)
Published in Journal of computational biology (01.12.2017)
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Journal Article
GADRP: graph convolutional networks and autoencoders for cancer drug response prediction
Wang, Hong, Dai, Chong, Wen, Yuqi, Wang, Xiaoqi, Liu, Wenjuan, He, Song, Bo, Xiaochen, Peng, Shaoliang
Published in Briefings in bioinformatics (19.01.2023)
Published in Briefings in bioinformatics (19.01.2023)
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Journal Article
DHUnet: Dual-branch hierarchical global–local fusion network for whole slide image segmentation
Wang, Lian, Pan, Liangrui, Wang, Hetian, Liu, Mingting, Feng, Zhichao, Rong, Pengfei, Chen, Zuo, Peng, Shaoliang
Published in Biomedical signal processing and control (01.08.2023)
Published in Biomedical signal processing and control (01.08.2023)
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Journal Article
Cellular fibronectin-targeted fluorescent aptamer probes for early detection and staging of liver fibrosis
Ge, Mengjun, Zou, Haitao, Chen, Jiahao, Zhang, Qinyao, Li, Chang, Yang, Jiaxing, Wu, Jiumei, Xie, Xing, Liu, Jun, Lei, Lei, Peng, Shaoliang, Nie, Hemin
Published in Acta biomaterialia (19.10.2024)
Published in Acta biomaterialia (19.10.2024)
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Journal Article
Special issue on Computational Resources and Methods in Biological Sciences
Lin, Hao, Peng, Shaoliang, Huang, Jian
Published in International journal of biological sciences (2018)
Published in International journal of biological sciences (2018)
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Journal Article
3DSGIMD: An accurate and interpretable molecular property prediction method using 3D spatial graph focusing network and structure-based feature fusion
Tian, Yanan, Wang, Chenbin, Lu, Ruiqiang, Tong, Henry H.Y., Gong, Xiaoqing, Qiu, Jiayue, Peng, Shaoliang, Yao, Xiaojun, Liu, Huanxiang
Published in Future generation computer systems (01.12.2024)
Published in Future generation computer systems (01.12.2024)
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Journal Article
D3AI-CoV: a deep learning platform for predicting drug targets and for virtual screening against COVID-19
Yang, Yanqing, Zhou, Deshan, Zhang, Xinben, Shi, Yulong, Han, Jiaxin, Zhou, Liping, Wu, Leyun, Ma, Minfei, Li, Jintian, Peng, Shaoliang, Xu, Zhijian, Zhu, Weiliang
Published in Briefings in bioinformatics (13.05.2022)
Published in Briefings in bioinformatics (13.05.2022)
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Journal Article
A Latency-Aware Multiple Data Replicas Placement Strategy for Fog Computing
Huang, Tiansheng, Lin, Weiwei, Li, Yin, He, LiGang, Peng, ShaoLiang
Published in Journal of signal processing systems (01.10.2019)
Published in Journal of signal processing systems (01.10.2019)
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Journal Article
SVPath: an accurate pipeline for predicting the pathogenicity of human exon structural variants
Yang, Yaning, Wang, Xiaoqi, Zhou, Deshan, Wei, Dong-Qing, Peng, Shaoliang
Published in Briefings in bioinformatics (10.03.2022)
Published in Briefings in bioinformatics (10.03.2022)
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Journal Article
Distinct Subtypes of Gastric Cancer Defined by Molecular Characterization Include Novel Mutational Signatures with Prognostic Capability
Li, Xiangchun, Wu, William K K, Xing, Rui, Wong, Sunny H, Liu, Yuexin, Fang, Xiaodong, Zhang, Yanlin, Wang, Mengyao, Wang, Jiaqian, Li, Lin, Zhou, Yong, Tang, Senwei, Peng, Shaoliang, Qiu, Kunlong, Chen, Longyun, Chen, Kexin, Yang, Huanming, Zhang, Wei, Chan, Matthew T V, Lu, Youyong, Sung, Joseph J Y, Yu, Jun
Published in Cancer research (Chicago, Ill.) (01.04.2016)
Published in Cancer research (Chicago, Ill.) (01.04.2016)
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Journal Article
Guide Positioning Sequencing identifies aberrant DNA methylation patterns that alter cell identity and tumor-immune surveillance networks
Li, Jin, Li, Yan, Li, Wei, Luo, Huaibing, Xi, Yanping, Dong, Shihua, Gao, Ming, Xu, Peng, Zhang, Baolong, Liang, Ying, Zou, Qingping, Hu, Xin, Peng, Lina, Zou, Dan, Wang, Ting, Yang, Hongbo, Jiang, Cizhong, Peng, Shaoliang, Wu, Feizhen, Yu, Wenqiang
Published in Genome research (01.02.2019)
Published in Genome research (01.02.2019)
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Journal Article
Whole-Genome Sequencing Reveals Diverse Models of Structural Variations in Esophageal Squamous Cell Carcinoma
Cheng, Caixia, Zhou, Yong, Li, Hongyi, Xiong, Teng, Li, Shuaicheng, Bi, Yanghui, Kong, Pengzhou, Wang, Fang, Cui, Heyang, Li, Yaoping, Fang, Xiaodong, Yan, Ting, Li, Yike, Wang, Juan, Yang, Bin, Zhang, Ling, Jia, Zhiwu, Song, Bin, Hu, Xiaoling, Yang, Jie, Qiu, Haile, Zhang, Gehong, Liu, Jing, Xu, Enwei, Shi, Ruyi, Zhang, Yanyan, Liu, Haiyan, He, Chanting, Zhao, Zhenxiang, Qian, Yu, Rong, Ruizhou, Han, Zhiwei, Zhang, Yanlin, Luo, Wen, Wang, Jiaqian, Peng, Shaoliang, Yang, Xukui, Li, Xiangchun, Li, Lin, Fang, Hu, Liu, Xingmin, Ma, Li, Chen, Yunqing, Guo, Shiping, Chen, Xing, Xi, Yanfeng, Li, Guodong, Liang, Jianfang, Yang, Xiaofeng, Guo, Jiansheng, Jia, JunMei, Li, Qingshan, Cheng, Xiaolong, Zhan, Qimin, Cui, Yongping
Published in American journal of human genetics (04.02.2016)
Published in American journal of human genetics (04.02.2016)
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Journal Article
mSNP: A Massively Parallel Algorithm for Large-Scale SNP Detection
Cui, Yingbo, Peng, Shaoliang, Lu, Yutong, Zhu, Xiaoqian, Wang, Bingqiang, Wu, Chengkun, Liao, Xiangke
Published in IEEE transactions on parallel and distributed systems (01.11.2018)
Published in IEEE transactions on parallel and distributed systems (01.11.2018)
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Journal Article
One Adapter for All Programming Languages? Adapter Tuning for Code Search and Summarization
Wang, Deze, Chen, Boxing, Li, Shanshan, Luo, Wei, Peng, Shaoliang, Dong, Wei, Liao, Xiangke
Published in 2023 IEEE/ACM 45th International Conference on Software Engineering (ICSE) (01.05.2023)
Published in 2023 IEEE/ACM 45th International Conference on Software Engineering (ICSE) (01.05.2023)
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