Global Trends in Marine Plankton Diversity across Kingdoms of Life
Ibarbalz, Federico M., Henry, Nicolas, Brandão, Manoela C., Martini, Séverine, Busseni, Greta, Byrne, Hannah, Coelho, Luis Pedro, Endo, Hisashi, Gasol, Josep M., Gregory, Ann C., Mahé, Frédéric, Rigonato, Janaina, Royo-Llonch, Marta, Salazar, Guillem, Sanz-Sáez, Isabel, Scalco, Eleonora, Soviadan, Dodji, Zayed, Ahmed A., Zingone, Adriana, Labadie, Karine, Ferland, Joannie, Marec, Claudie, Kandels, Stefanie, Picheral, Marc, Dimier, Céline, Poulain, Julie, Pisarev, Sergey, Carmichael, Margaux, Pesant, Stéphane, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Boss, Emmanuel, Bowler, Chris, Cochrane, Guy, de Vargas, Colomban, Follows, Mick, Gorsky, Gabriel, Grimsley, Nigel, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels, Stefanie, Karp-Boss, Lee, Karsenti, Eric, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stéphane, Poulton, Nicole, Raes, Jeroen, Sardet, Christian, Speich, Sabrina, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Babin, Marcel, Boss, Emmanuel, Iudicone, Daniele, Jaillon, Olivier, Acinas, Silvia G., Ogata, Hiroyuki, Pelletier, Eric, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Bopp, Laurent, de Vargas, Colomban, Karp-Boss, Lee, Wincker, Patrick, Lombard, Fabien, Bowler, Chris, Zinger, Lucie
Published in Cell (14.11.2019)
Published in Cell (14.11.2019)
Get full text
Journal Article
Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
Salazar, Guillem, Paoli, Lucas, Alberti, Adriana, Huerta-Cepas, Jaime, Ruscheweyh, Hans-Joachim, Cuenca, Miguelangel, Field, Christopher M., Coelho, Luis Pedro, Cruaud, Corinne, Engelen, Stefan, Gregory, Ann C., Labadie, Karine, Marec, Claudie, Pelletier, Eric, Royo-Llonch, Marta, Roux, Simon, Sánchez, Pablo, Uehara, Hideya, Zayed, Ahmed A., Zeller, Georg, Carmichael, Margaux, Dimier, Céline, Ferland, Joannie, Kandels, Stefanie, Picheral, Marc, Pisarev, Sergey, Poulain, Julie, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Boss, Emmanuel, Bowler, Chris, Cochrane, Guy, de Vargas, Colomban, Follows, Michael, Gorsky, Gabriel, Grimsley, Nigel, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels-Lewis, Stefanie, Karp-Boss, Lee, Karsenti, Eric, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stephane, Poulton, Nicole, Raes, Jeroen, Sardet, Christian, Speich, Sabrina, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Acinas, Silvia G., Babin, Marcel, Bork, Peer, Bowler, Chris, de Vargas, Colomban, Guidi, Lionel, Hingamp, Pascal, Iudicone, Daniele, Karp-Boss, Lee, Karsenti, Eric, Ogata, Hiroyuki, Pesant, Stephane, Speich, Sabrina, Sullivan, Matthew B., Wincker, Patrick, Sunagawa, Shinichi
Published in Cell (14.11.2019)
Published in Cell (14.11.2019)
Get full text
Journal Article
Environmental characteristics of Agulhas rings affect interocean plankton transport
Villar, Emilie, Farrant, Gregory K., Follows, Michael, Garczarek, Laurence, Speich, Sabrina, Audic, Stéphane, Bittner, Lucie, Blanke, Bruno, Brum, Jennifer R., Brunet, Christophe, Casotti, Raffaella, Chase, Alison, Dolan, John R., d’Ortenzio, Fabrizio, Gattuso, Jean-Pierre, Grima, Nicolas, Guidi, Lionel, Hill, Christopher N., Jahn, Oliver, Jamet, Jean-Louis, Le Goff, Hervé, Lepoivre, Cyrille, Malviya, Shruti, Pelletier, Eric, Romagnan, Jean-Baptiste, Roux, Simon, Santini, Sébastien, Scalco, Eleonora, Schwenck, Sarah M., Tanaka, Atsuko, Testor, Pierre, Vannier, Thomas, Vincent, Flora, Zingone, Adriana, Dimier, Céline, Picheral, Marc, Searson, Sarah, Kandels-Lewis, Stefanie, Acinas, Silvia G., Bork, Peer, Boss, Emmanuel, de Vargas, Colomban, Gorsky, Gabriel, Ogata, Hiroyuki, Pesant, Stéphane, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Karsenti, Eric, Bowler, Chris, Not, Fabrice, Hingamp, Pascal, Iudicone, Daniele
Published in Science (American Association for the Advancement of Science) (22.05.2015)
Published in Science (American Association for the Advancement of Science) (22.05.2015)
Get full text
Journal Article
The Ocean Gene Atlas: exploring the biogeography of plankton genes online
Villar, Emilie, Vannier, Thomas, Vernette, Caroline, Lescot, Magali, Cuenca, Miguelangel, Alexandre, Aurélien, Bachelerie, Paul, Rosnet, Thomas, Pelletier, Eric, Sunagawa, Shinichi, Hingamp, Pascal
Published in Nucleic acids research (02.07.2018)
Published in Nucleic acids research (02.07.2018)
Get full text
Journal Article
Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome
Zayed, Ahmed A, Wainaina, James M, Dominguez-Huerta, Guillermo, Pelletier, Eric, Guo, Jiarong, Mohssen, Mohamed, Tian, Funing, Pratama, Akbar Adjie, Bolduc, Benjamin, Zablocki, Olivier, Cronin, Dylan, Solden, Lindsey, Delage, Erwan, Alberti, Adriana, Aury, Jean-Marc, Carradec, Quentin, da Silva, Corinne, Labadie, Karine, Poulain, Julie, Ruscheweyh, Hans-Joachim, Salazar, Guillem, Shatoff, Elan, Bundschuh, Ralf, Fredrick, Kurt, Kubatko, Laura S, Chaffron, Samuel, Culley, Alexander I, Sunagawa, Shinichi, Kuhn, Jens H, Wincker, Patrick, Sullivan, Matthew B, Acinas, Silvia G, Babin, Marcel, Bork, Peer, Boss, Emmanuel, Bowler, Chris, Cochrane, Guy, de Vargas, Colomban, Gorsky, Gabriel, Guidi, Lionel, Grimsley, Nigel, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels, Stefanie, Karp-Boss, Lee, Karsenti, Eric, Not, Fabrice, Ogata, Hiroyuki, Poulton, Nicole, Pesant, Stéphane, Sardet, Christian, Speich, Sabrinia, Stemmann, Lars, Sullivan, Matthew B, Sungawa, Shinichi, Wincker, Patrick
Published in Science (American Association for the Advancement of Science) (08.04.2022)
Published in Science (American Association for the Advancement of Science) (08.04.2022)
Get full text
Journal Article
A global ocean atlas of eukaryotic genes
Carradec, Quentin, Pelletier, Eric, Da Silva, Corinne, Alberti, Adriana, Seeleuthner, Yoann, Blanc-Mathieu, Romain, Lima-Mendez, Gipsi, Rocha, Fabio, Tirichine, Leila, Labadie, Karine, Kirilovsky, Amos, Bertrand, Alexis, Engelen, Stefan, Madoui, Mohammed-Amin, Méheust, Raphaël, Poulain, Julie, Romac, Sarah, Richter, Daniel J., Yoshikawa, Genki, Dimier, Céline, Kandels-Lewis, Stefanie, Picheral, Marc, Searson, Sarah, Jaillon, Olivier, Aury, Jean-Marc, Karsenti, Eric, Sullivan, Matthew B., Sunagawa, Shinichi, Bork, Peer, Not, Fabrice, Hingamp, Pascal, Raes, Jeroen, Guidi, Lionel, Ogata, Hiroyuki, de Vargas, Colomban, Iudicone, Daniele, Bowler, Chris, Wincker, Patrick
Published in Nature communications (25.01.2018)
Published in Nature communications (25.01.2018)
Get full text
Journal Article
Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge
Rivière, Delphine, Desvignes, Virginie, Pelletier, Eric, Chaussonnerie, Sébastien, Guermazi, Sonda, Weissenbach, Jean, Li, Tianlun, Camacho, Patricia, Sghir, Abdelghani
Published in The ISME Journal (01.06.2009)
Published in The ISME Journal (01.06.2009)
Get full text
Journal Article
Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
Pierella Karlusich, Juan José, Pelletier, Eric, Lombard, Fabien, Carsique, Madeline, Dvorak, Etienne, Colin, Sébastien, Picheral, Marc, Cornejo-Castillo, Francisco M., Acinas, Silvia G., Pepperkok, Rainer, Karsenti, Eric, de Vargas, Colomban, Wincker, Patrick, Bowler, Chris, Foster, Rachel A.
Published in Nature communications (06.07.2021)
Published in Nature communications (06.07.2021)
Get full text
Journal Article
Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
Lücker, Sebastian, Wagner, Michael, Maixner, Frank, Pelletier, Eric, Koch, Hanna, Vacherie, Benoit, Rattei, Thomas, Damsté, Jaap S. Sinninghe, Spieck, Eva, Le Paslier, Denis, Daims, Holger
Published in Proceedings of the National Academy of Sciences - PNAS (27.07.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (27.07.2010)
Get full text
Journal Article
Linking extreme seasonality and gene expression in Arctic marine protists
Wutkowska, Magdalena, Vader, Anna, Logares, Ramiro, Pelletier, Eric, Gabrielsen, Tove M.
Published in Scientific reports (05.09.2023)
Published in Scientific reports (05.09.2023)
Get full text
Journal Article
Towards the human intestinal microbiota phylogenetic core
Tap, Julien, Mondot, Stanislas, Levenez, Florence, Pelletier, Eric, Caron, Christophe, Furet, Jean-Pierre, Ugarte, Edgardo, Muñoz-Tamayo, Rafael, Paslier, Denis L.E, Nalin, Renaud, Dore, Joel, Leclerc, Marion
Published in Environmental microbiology (01.10.2009)
Published in Environmental microbiology (01.10.2009)
Get full text
Journal Article
Diversity and ecological footprint of Global Ocean RNA viruses
Dominguez-Huerta, Guillermo, Zayed, Ahmed A, Wainaina, James M, Guo, Jiarong, Tian, Funing, Pratama, Akbar Adjie, Bolduc, Benjamin, Mohssen, Mohamed, Zablocki, Olivier, Pelletier, Eric, Delage, Erwan, Alberti, Adriana, Aury, Jean-Marc, Carradec, Quentin, da Silva, Corinne, Labadie, Karine, Poulain, Julie, Bowler, Chris, Eveillard, Damien, Guidi, Lionel, Karsenti, Eric, Kuhn, Jens H, Ogata, Hiroyuki, Wincker, Patrick, Culley, Alexander, Chaffron, Samuel, Sullivan, Matthew B
Published in Science (American Association for the Advancement of Science) (10.06.2022)
Published in Science (American Association for the Advancement of Science) (10.06.2022)
Get full text
Journal Article
A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Pierella Karlusich, Juan José, Pelletier, Eric, Zinger, Lucie, Lombard, Fabien, Zingone, Adriana, Colin, Sébastien, Gasol, Josep M., Dorrell, Richard G., Henry, Nicolas, Scalco, Eleonora, Acinas, Silvia G., Wincker, Patrick, Vargas, Colomban, Bowler, Chris
Published in Molecular ecology resources (01.01.2023)
Published in Molecular ecology resources (01.01.2023)
Get full text
Journal Article
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Seeleuthner, Yoann, Mondy, Samuel, Lombard, Vincent, Carradec, Quentin, Pelletier, Eric, Wessner, Marc, Leconte, Jade, Mangot, Jean-François, Poulain, Julie, Labadie, Karine, Logares, Ramiro, Sunagawa, Shinichi, de Berardinis, Véronique, Salanoubat, Marcel, Dimier, Céline, Kandels-Lewis, Stefanie, Picheral, Marc, Searson, Sarah, Pesant, Stephane, Poulton, Nicole, Stepanauskas, Ramunas, Bork, Peer, Bowler, Chris, Hingamp, Pascal, Sullivan, Matthew B., Iudicone, Daniele, Massana, Ramon, Aury, Jean-Marc, Henrissat, Bernard, Karsenti, Eric, Jaillon, Olivier, Sieracki, Mike, de Vargas, Colomban, Wincker, Patrick
Published in Nature communications (22.01.2018)
Published in Nature communications (22.01.2018)
Get full text
Journal Article
Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation
Koch, Hanna, Galushko, Alexander, Albertsen, Mads, Schintlmeister, Arno, Gruber-Dorninger, Christiane, Lücker, Sebastian, Pelletier, Eric, Le Paslier, Denis, Spieck, Eva, Richter, Andreas, Nielsen, Per H., Wagner, Michael, Daims, Holger
Published in Science (American Association for the Advancement of Science) (29.08.2014)
Published in Science (American Association for the Advancement of Science) (29.08.2014)
Get full text
Journal Article
A refined picture of the native amine dehydrogenase family revealed by extensive biodiversity screening
Elisée, Eddy, Ducrot, Laurine, Méheust, Raphaël, Bastard, Karine, Fossey-Jouenne, Aurélie, Grogan, Gideon, Pelletier, Eric, Petit, Jean-Louis, Stam, Mark, de Berardinis, Véronique, Zaparucha, Anne, Vallenet, David, Vergne-Vaxelaire, Carine
Published in Nature communications (10.06.2024)
Published in Nature communications (10.06.2024)
Get full text
Journal Article
Explainable artificial intelligence models for predicting risk of suicide using health administrative data in Quebec
Gholi Zadeh Kharrat, Fatemeh, Gagne, Christian, Lesage, Alain, Gariépy, Geneviève, Pelletier, Jean-François, Brousseau-Paradis, Camille, Rochette, Louis, Pelletier, Eric, Lévesque, Pascale, Mohammed, Mada, Wang, JianLi
Published in PloS one (03.04.2024)
Published in PloS one (03.04.2024)
Get full text
Journal Article
Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence
Fonknechten, Nuria, Chaussonnerie, Sébastien, Tricot, Sabine, Lajus, Aurélie, Andreesen, Jan R, Perchat, Nadia, Pelletier, Eric, Gouyvenoux, Michel, Barbe, Valérie, Salanoubat, Marcel, Le Paslier, Denis, Weissenbach, Jean, Cohen, Georges N, Kreimeyer, Annett
Published in BMC genomics (11.10.2010)
Published in BMC genomics (11.10.2010)
Get full text
Journal Article