Multimodal interactions of drugs, natural compounds and pollutants with the gut microbiota
Lindell, Anna E, Zimmermann-Kogadeeva, Maria, Patil, Kiran R
Published in Nature reviews. Microbiology (01.07.2022)
Published in Nature reviews. Microbiology (01.07.2022)
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metaGEM: reconstruction of genome scale metabolic models directly from metagenomes
Zorrilla, Francisco, Buric, Filip, Patil, Kiran R, Zelezniak, Aleksej
Published in Nucleic acids research (02.12.2021)
Published in Nucleic acids research (02.12.2021)
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Journal Article
Bioaccumulation of therapeutic drugs by human gut bacteria
Klünemann, Martina, Andrejev, Sergej, Blasche, Sonja, Mateus, Andre, Phapale, Prasad, Devendran, Saravanan, Vappiani, Johanna, Simon, Bernd, Scott, Timothy A, Kafkia, Eleni, Konstantinidis, Dimitrios, Zirngibl, Katharina, Mastrorilli, Eleonora, Banzhaf, Manuel, Mackmull, Marie-Therese, Hövelmann, Felix, Nesme, Leo, Brochado, Ana Rita, Maier, Lisa, Bock, Thomas, Periwal, Vinita, Kumar, Manjeet, Kim, Yongkyu, Tramontano, Melanie, Schultz, Carsten, Beck, Martin, Hennig, Janosch, Zimmermann, Michael, Sévin, Daniel C, Cabreiro, Filipe, Savitski, Mikhail M, Bork, Peer, Typas, Athanasios, Patil, Kiran R
Published in Nature (London) (23.09.2021)
Published in Nature (London) (23.09.2021)
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Industrial systems biology of Saccharomyces cerevisiae enables novel succinic acid cell factory
Otero, José Manuel, Cimini, Donatella, Patil, Kiran R, Poulsen, Simon G, Olsson, Lisbeth, Nielsen, Jens
Published in PloS one (21.01.2013)
Published in PloS one (21.01.2013)
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Journal Article
G4-PROTAC: targeted degradation of a G-quadruplex binding protein
Patil, Kiran M, Chin, Danielle, Seah, Hui Ling, Shi, Qi, Lim, Kah Wai, Phan, Anh Tuân
Published in Chemical communications (Cambridge, England) (30.11.2021)
Published in Chemical communications (Cambridge, England) (30.11.2021)
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Improved vanillin production in baker's yeast through in silico design
Brochado, Ana Rita, Matos, Claudia, Møller, Birger L, Hansen, Jørgen, Mortensen, Uffe H, Patil, Kiran Raosaheb
Published in Microbial cell factories (08.11.2010)
Published in Microbial cell factories (08.11.2010)
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A pathogen-specific isotope tracing approach reveals metabolic activities and fluxes of intracellular Salmonella
Mitosch, Karin, Beyß, Martin, Phapale, Prasad, Drotleff, Bernhard, Nöh, Katharina, Alexandrov, Theodore, Patil, Kiran R., Typas, Athanasios
Published in PLoS biology (18.08.2023)
Published in PLoS biology (18.08.2023)
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Journal Article
Evolutionary programming as a platform for in silico metabolic engineering
Patil, Kiran Raosaheb, Rocha, Isabel, Förster, Jochen, Nielsen, Jens
Published in BMC bioinformatics (23.12.2005)
Published in BMC bioinformatics (23.12.2005)
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Synthesis of Alkyl and Aryl Boronate Esters via CeO2-Catalyzed Borylation of Alkyl and Aryl Electrophiles Including Alkyl Chlorides
Bhawar, Ramesh, Saini, Suresh, Patil, Kiran S., Nagaraju, D. H., Bose, Shubhankar Kumar
Published in Journal of organic chemistry (01.12.2023)
Published in Journal of organic chemistry (01.12.2023)
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Journal Article
Design and development of Fujicalin-based axitinib liquisolid compacts for improved dissolution and bioavailability to treat renal cell carcinoma
Yadav, Priyanka S., Hajare, Ashok A., Patil, Kiran S.
Published in European journal of pharmaceutics and biopharmaceutics (01.11.2024)
Published in European journal of pharmaceutics and biopharmaceutics (01.11.2024)
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Journal Article
Ecological modelling approaches for predicting emergent properties in microbial communities
van den Berg, Naomi Iris, Machado, Daniel, Santos, Sophia, Rocha, Isabel, Chacón, Jeremy, Harcombe, William, Mitri, Sara, Patil, Kiran R
Published in Nature ecology & evolution (01.07.2022)
Published in Nature ecology & evolution (01.07.2022)
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Journal Article
Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition
Oatley, Morgan, Bölükbası, Özge Vargel, Svensson, Valentine, Shvartsman, Maya, Ganter, Kerstin, Zirngibl, Katharina, Pavlovich, Polina V, Milchevskaya, Vladislava, Foteva, Vladimira, Natarajan, Kedar N, Baying, Bianka, Benes, Vladimir, Patil, Kiran R, Teichmann, Sarah A, Lancrin, Christophe
Published in Nature communications (29.01.2020)
Published in Nature communications (29.01.2020)
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Journal Article
MEMOTE for standardized genome-scale metabolic model testing
Lieven, Christian, Beber, Moritz E, Olivier, Brett G, Bergmann, Frank T, Ataman, Meric, Babaei, Parizad, Bartell, Jennifer A, Blank, Lars M, Chauhan, Siddharth, Correia, Kevin, Diener, Christian, Dräger, Andreas, Ebert, Birgitta E, Edirisinghe, Janaka N, Faria, José P, Feist, Adam M, Fengos, Georgios, Fleming, Ronan M T, García-Jiménez, Beatriz, Hatzimanikatis, Vassily, van Helvoirt, Wout, Henry, Christopher S, Hermjakob, Henning, Herrgård, Markus J, Kaafarani, Ali, Kim, Hyun Uk, King, Zachary, Klamt, Steffen, Klipp, Edda, Koehorst, Jasper J, König, Matthias, Lakshmanan, Meiyappan, Lee, Dong-Yup, Lee, Sang Yup, Lee, Sunjae, Lewis, Nathan E, Liu, Filipe, Ma, Hongwu, Machado, Daniel, Mahadevan, Radhakrishnan, Maia, Paulo, Mardinoglu, Adil, Medlock, Gregory L, Monk, Jonathan M, Nielsen, Jens, Nielsen, Lars Keld, Nogales, Juan, Nookaew, Intawat, Palsson, Bernhard O, Papin, Jason A, Patil, Kiran R, Poolman, Mark, Price, Nathan D, Resendis-Antonio, Osbaldo, Richelle, Anne, Rocha, Isabel, Sánchez, Benjamín J, Schaap, Peter J, Malik Sheriff, Rahuman S, Shoaie, Saeed, Sonnenschein, Nikolaus, Teusink, Bas, Vilaça, Paulo, Vik, Jon Olav, Wodke, Judith A H, Xavier, Joana C, Yuan, Qianqian, Zakhartsev, Maksim, Zhang, Cheng
Published in Nature biotechnology (01.03.2020)
Published in Nature biotechnology (01.03.2020)
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