Integrative Functional Genomic Analyses Implicate Specific Molecular Pathways and Circuits in Autism
Parikshak, Neelroop N., Luo, Rui, Zhang, Alice, Won, Hyejung, Lowe, Jennifer K., Chandran, Vijayendran, Horvath, Steve, Geschwind, Daniel H.
Published in Cell (21.11.2013)
Published in Cell (21.11.2013)
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Journal Article
Gene expression in human brain implicates sexually dimorphic pathways in autism spectrum disorders
Werling, Donna M, Parikshak, Neelroop N, Geschwind, Daniel H
Published in Nature communications (19.02.2016)
Published in Nature communications (19.02.2016)
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Journal Article
Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders
Parikshak, Neelroop N, Gandal, Michael J, Geschwind, Daniel H
Published in Nature reviews. Genetics (01.08.2015)
Published in Nature reviews. Genetics (01.08.2015)
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Journal Article
Genome-wide, integrative analysis implicates microRNA dysregulation in autism spectrum disorder
Wu, Ye E, Parikshak, Neelroop N, Belgard, T Grant, Geschwind, Daniel H
Published in Nature neuroscience (01.11.2016)
Published in Nature neuroscience (01.11.2016)
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Journal Article
Cytoplasmic Rbfox1 Regulates the Expression of Synaptic and Autism-Related Genes
Lee, Ji-Ann, Damianov, Andrey, Lin, Chia-Ho, Fontes, Mariana, Parikshak, Neelroop N., Anderson, Erik S., Geschwind, Daniel H., Black, Douglas L., Martin, Kelsey C.
Published in Neuron (Cambridge, Mass.) (06.01.2016)
Published in Neuron (Cambridge, Mass.) (06.01.2016)
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Journal Article
Chromosome conformation elucidates regulatory relationships in developing human brain
Won, Hyejung, de la Torre-Ubieta, Luis, Stein, Jason L, Parikshak, Neelroop N, Huang, Jerry, Opland, Carli K, Gandal, Michael J, Sutton, Gavin J, Hormozdiari, Farhad, Lu, Daning, Lee, Changhoon, Eskin, Eleazar, Voineagu, Irina, Ernst, Jason, Geschwind, Daniel H
Published in Nature (London) (27.10.2016)
Published in Nature (London) (27.10.2016)
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Journal Article
The road to precision psychiatry: translating genetics into disease mechanisms
Gandal, Michael J, Leppa, Virpi, Won, Hyejung, Parikshak, Neelroop N, Geschwind, Daniel H
Published in Nature neuroscience (01.11.2016)
Published in Nature neuroscience (01.11.2016)
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Journal Article
Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism
Parikshak, Neelroop N, Swarup, Vivek, Belgard, T Grant, Irimia, Manuel, Ramaswami, Gokul, Gandal, Michael J, Hartl, Christopher, Leppa, Virpi, Ubieta, Luis de la Torre, Huang, Jerry, Lowe, Jennifer K, Blencowe, Benjamin J, Horvath, Steve, Geschwind, Daniel H
Published in Nature (London) (15.12.2016)
Published in Nature (London) (15.12.2016)
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Journal Article
Histone Acetylome-wide Association Study of Autism Spectrum Disorder
Sun, Wenjie, Poschmann, Jeremie, Cruz-Herrera del Rosario, Ricardo, Parikshak, Neelroop N., Hajan, Hajira Shreen, Kumar, Vibhor, Ramasamy, Ramalakshmi, Belgard, T. Grant, Elanggovan, Bavani, Wong, Chloe Chung Yi, Mill, Jonathan, Geschwind, Daniel H., Prabhakar, Shyam
Published in Cell (17.11.2016)
Published in Cell (17.11.2016)
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Journal Article
Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD
Gandal, Michael J, Haney, Jillian R, Wamsley, Brie, Yap, Chloe X, Parhami, Sepideh, Emani, Prashant S, Chang, Nathan, Chen, George T, Hoftman, Gil D, de Alba, Diego, Ramaswami, Gokul, Hartl, Christopher L, Bhattacharya, Arjun, Luo, Chongyuan, Jin, Ting, Wang, Daifeng, Kawaguchi, Riki, Quintero, Diana, Ou, Jing, Wu, Ye Emily, Parikshak, Neelroop N, Swarup, Vivek, Belgard, T Grant, Gerstein, Mark, Pasaniuc, Bogdan, Geschwind, Daniel H
Published in Nature (London) (17.11.2022)
Published in Nature (London) (17.11.2022)
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Journal Article
Sex-chromosome dosage effects on gene expression in humans
Raznahan, Armin, Parikshak, Neelroop N., Chandran, Vijay, Blumenthal, Jonathan D., Clasen, Liv S., Alexander-Bloch, Aaron F., Zinn, Andrew R., Wangsa, Danny, Wise, Jasen, Murphy, Declan G. M., Bolton, Patrick F., Ried, Thomas, Ross, Judith, Giedd, Jay N., Geschwind, Daniel H.
Published in Proceedings of the National Academy of Sciences - PNAS (10.07.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (10.07.2018)
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Journal Article
Rare Inherited Variation in Autism: Beginning to See the Forest and a Few Trees
Stein, Jason L., Parikshak, Neelroop N., Geschwind, Daniel H.
Published in Neuron (Cambridge, Mass.) (23.01.2013)
Published in Neuron (Cambridge, Mass.) (23.01.2013)
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Journal Article
Common and rare variant associations with clonal haematopoiesis phenotypes
Kessler, Michael D, Damask, Amy, O'Keeffe, Sean, Banerjee, Nilanjana, Li, Dadong, Watanabe, Kyoko, Marketta, Anthony, Van Meter, Michael, Semrau, Stefan, Horowitz, Julie, Tang, Jing, Kosmicki, Jack A, Rajagopal, Veera M, Zou, Yuxin, Houvras, Yariv, Ghosh, Arkopravo, Gillies, Christopher, Mbatchou, Joelle, White, Ryan R, Verweij, Niek, Bovijn, Jonas, Parikshak, Neelroop N, LeBlanc, Michelle G, Jones, Marcus, Glass, David J, Lotta, Luca A, Cantor, Michael N, Atwal, Gurinder S, Locke, Adam E, Ferreira, Manuel A R, Deering, Raquel, Paulding, Charles, Shuldiner, Alan R, Thurston, Gavin, Ferrando, Adolfo A, Salerno, Will, Reid, Jeffrey G, Overton, John D, Marchini, Jonathan, Kang, Hyun M, Baras, Aris, Abecasis, Gonçalo R, Jorgenson, Eric
Published in Nature (London) (08.12.2022)
Published in Nature (London) (08.12.2022)
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Journal Article
Brain structure and obesity
Raji, Cyrus A., Ho, April J., Parikshak, Neelroop N., Becker, James T., Lopez, Oscar L., Kuller, Lewis H., Hua, Xue, Leow, Alex D., Toga, Arthur W., Thompson, Paul M.
Published in Human brain mapping (01.03.2010)
Published in Human brain mapping (01.03.2010)
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Journal Article
Genome-wide DNA methylation profiling identifies convergent molecular signatures associated with idiopathic and syndromic autism in post-mortem human brain tissue
Wong, Chloe C Y, Smith, Rebecca G, Hannon, Eilis, Ramaswami, Gokul, Parikshak, Neelroop N, Assary, Elham, Troakes, Claire, Poschmann, Jeremie, Schalkwyk, Leonard C, Sun, Wenjie, Prabhakar, Shyam, Geschwind, Daniel H, Mill, Jonathan
Published in Human molecular genetics (01.07.2019)
Published in Human molecular genetics (01.07.2019)
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Journal Article
De novo mutations revealed by whole-exome sequencing are strongly associated with autism
SANDERS, Stephan J, MURTHA, Michael T, WALKER, Michael F, OBER, Gordon T, TERAN, Nicole A, SONG, Youeun, EL-FISHAWY, Paul, MURTHA, Ryan C, CHOI, Murim, OVERTON, John D, BJORNSON, Robert D, CARRIERO, Nicholas J, GUPTA, Abha R, MEYER, Kyle A, BILGUVAR, Kaya, MANE, Shrikant M, SESTAN, Nenad, LIFTON, Richard P, GIINEL, Murat, ROEDER, Kathryn, GESCHWIND, Daniel H, DEVNN, Bernie, STATE, Matthew W, MURDOCH, John D, RAUBESON, Melanie J, WILLSEY, A. Jeremy, ERCAN-SENCICEK, A. Gulhan, DILULLO, Nicholas M, PARIKSHAK, Neelroop N, STEIN, Jason L
Published in Nature (London) (10.05.2012)
Published in Nature (London) (10.05.2012)
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Journal Article
Tropism of SARS-CoV-2 for human cortical astrocytes
Andrews, Madeline G, Mukhtar, Tanzila, Eze, Ugomma C, Simoneau, Camille R, Ross, Jayden, Parikshak, Neelroop, Wang, Shaohui, Zhou, Li, Koontz, Mark, Velmeshev, Dmitry, Siebert, Clara-Vita, Gemenes, Kaila M, Tabata, Takako, Perez, Yonatan, Wang, Li, Mostajo-Radji, Mohammed A, de Majo, Martina, Donohue, Kevin C, Shin, David, Salma, Jahan, Pollen, Alex A, Nowakowski, Tomasz J, Ullian, Erik, Kumar, G Renuka, Winkler, Ethan A, Crouch, Elizabeth E, Ott, Melanie, Kriegstein, Arnold R
Published in Proceedings of the National Academy of Sciences - PNAS (26.07.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (26.07.2022)
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Journal Article
RBFOX1 regulates both splicing and transcriptional networks in human neuronal development
FOGEL, Brent L, WEXLER, Eric, WAHNICH, Amanda, FRIEDRICH, Tara, VIJAYENDRAN, Chandran, GAO, Fuying, PARIKSHAK, Neelroop, KONOPKA, Genevieve, GESCHWIND, Daniel H
Published in Human molecular genetics (01.10.2012)
Published in Human molecular genetics (01.10.2012)
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Journal Article
Specific responses of human hippocampal neurons are associated with better memory
Suthana, Nanthia A., Parikshak, Neelroop N., Ekstrom, Arne D., Ison, Matias J., Knowlton, Barbara J., Bookheimer, Susan Y., Fried, Itzhak
Published in Proceedings of the National Academy of Sciences - PNAS (18.08.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (18.08.2015)
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Journal Article
Strong correlation of downregulated genes related to synaptic transmission and mitochondria in post-mortem autism cerebral cortex
Schwede, Matthew, Nagpal, Shailender, Gandal, Michael J, Parikshak, Neelroop N, Mirnics, Karoly, Geschwind, Daniel H, Morrow, Eric M
Published in Journal of neurodevelopmental disorders (01.06.2018)
Published in Journal of neurodevelopmental disorders (01.06.2018)
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