Specific capture and whole-genome sequencing of viruses from clinical samples
Depledge, Daniel P, Palser, Anne L, Watson, Simon J, Lai, Imogen Yi-Chun, Gray, Eleanor R, Grant, Paul, Kanda, Ravinder K, Leproust, Emily, Kellam, Paul, Breuer, Judith
Published in PloS one (18.11.2011)
Published in PloS one (18.11.2011)
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Elicitation of Potent Neutralizing Antibody Responses by Designed Protein Nanoparticle Vaccines for SARS-CoV-2
Walls, Alexandra C., Fiala, Brooke, Schäfer, Alexandra, Wrenn, Samuel, Pham, Minh N., Murphy, Michael, Tse, Longping V., Shehata, Laila, O’Connor, Megan A., Chen, Chengbo, Navarro, Mary Jane, Miranda, Marcos C., Pettie, Deleah, Ravichandran, Rashmi, Kraft, John C., Ogohara, Cassandra, Palser, Anne, Chalk, Sara, Lee, E-Chiang, Guerriero, Kathryn, Kepl, Elizabeth, Chow, Cameron M., Sydeman, Claire, Hodge, Edgar A., Brown, Brieann, Fuller, Jim T., Dinnon, Kenneth H., Gralinski, Lisa E., Leist, Sarah R., Gully, Kendra L., Lewis, Thomas B., Guttman, Miklos, Chu, Helen Y., Lee, Kelly K., Fuller, Deborah H., Baric, Ralph S., Kellam, Paul, Carter, Lauren, Pepper, Marion, Sheahan, Timothy P., Veesler, David, King, Neil P.
Published in Cell (25.11.2020)
Published in Cell (25.11.2020)
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Genome diversity of Epstein-Barr virus from multiple tumor types and normal infection
Palser, Anne L, Grayson, Nicholas E, White, Robert E, Corton, Craig, Correia, Samantha, Ba Abdullah, Mohammed M, Watson, Simon J, Cotten, Matthew, Arrand, John R, Murray, Paul G, Allday, Martin J, Rickinson, Alan B, Young, Lawrence S, Farrell, Paul J, Kellam, Paul
Published in Journal of virology (01.05.2015)
Published in Journal of virology (01.05.2015)
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Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study
Cotten, Matthew, PhD, Watson, Simon J, PhD, Kellam, Paul, Prof, Al-Rabeeah, Abdullah A, FRCS, Makhdoom, Hatem Q, PhD, Assiri, Abdullah, MD, Al-Tawfiq, Jaffar A, MD, Alhakeem, Rafat F, MD, Madani, Hossam, PhD, AlRabiah, Fahad A, MD, Hajjar, Sami Al, MD, Al-nassir, Wafa N, MD, Albarrak, Ali, MD, Flemban, Hesham, MD, Balkhy, Hanan H, MD, Alsubaie, Sarah, MD, Palser, Anne L, PhD, Gall, Astrid, Dr Med Vet, Bashford-Rogers, Rachael, MChem, Rambaut, Andrew, Prof, Zumla, Alimuddin I, Prof, Memish, Ziad A, Prof
Published in The Lancet (British edition) (14.12.2013)
Published in The Lancet (British edition) (14.12.2013)
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Journal Article
Sequence Variation of Epstein-Barr Virus: Viral Types, Geography, Codon Usage, and Diseases
Correia, Samantha, Bridges, Ray, Wegner, Fanny, Venturini, Cristina, Palser, Anne, Middeldorp, Jaap M, Cohen, Jeffrey I, Lorenzetti, Mario A, Bassano, Irene, White, Robert E, Kellam, Paul, Breuer, Judith, Farrell, Paul J
Published in Journal of virology (15.11.2018)
Published in Journal of virology (15.11.2018)
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Journal Article
Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus
Cotten, Matthew, Lam, Tommy T, Watson, Simon J, Palser, Anne L, Petrova, Velislava, Grant, Paul, Pybus, Oliver G, Rambaut, Andrew, Guan, Yi, Pillay, Deenan, Kellam, Paul, Nastouli, Eleni
Published in Emerging infectious diseases (01.05.2013)
Published in Emerging infectious diseases (01.05.2013)
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Network properties derived from deep sequencing of human B-cell receptor repertoires delineate B-cell populations
Bashford-Rogers, Rachael J M, Palser, Anne L, Huntly, Brian J, Rance, Richard, Vassiliou, George S, Follows, George A, Kellam, Paul
Published in Genome research (01.11.2013)
Published in Genome research (01.11.2013)
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Spread, circulation, and evolution of the Middle East respiratory syndrome coronavirus
Cotten, Matthew, Watson, Simon J, Zumla, Alimuddin I, Makhdoom, Hatem Q, Palser, Anne L, Ong, Swee Hoe, Al Rabeeah, Abdullah A, Alhakeem, Rafat F, Assiri, Abdullah, Al-Tawfiq, Jaffar A, Albarrak, Ali, Barry, Mazin, Shibl, Atef, Alrabiah, Fahad A, Hajjar, Sami, Balkhy, Hanan H, Flemban, Hesham, Rambaut, Andrew, Kellam, Paul, Memish, Ziad A
Published in mBio (18.02.2014)
Published in mBio (18.02.2014)
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Natural Variation of Epstein-Barr Virus Genes, Proteins, and Primary MicroRNA
Correia, Samantha, Palser, Anne, Elgueta Karstegl, Claudio, Middeldorp, Jaap M, Ramayanti, Octavia, Cohen, Jeffrey I, Hildesheim, Allan, Fellner, Maria Dolores, Wiels, Joelle, White, Robert E, Kellam, Paul, Farrell, Paul J
Published in Journal of virology (01.08.2017)
Published in Journal of virology (01.08.2017)
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Journal Article
Genome-Wide Sequence Analysis of Kaposi Sarcoma-Associated Herpesvirus Shows Diversification Driven by Recombination
Sallah, Neneh, Palser, Anne L, Watson, Simon J, Labo, Nazzarena, Asiki, Gershim, Marshall, Vickie, Newton, Robert, Whitby, Denise, Kellam, Paul, Barroso, Inês
Published in The Journal of infectious diseases (20.10.2018)
Published in The Journal of infectious diseases (20.10.2018)
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Journal Article
Heterogeneity of the Epstein-Barr Virus (EBV) Major Internal Repeat Reveals Evolutionary Mechanisms of EBV and a Functional Defect in the Prototype EBV Strain B95-8
Ba Abdullah, Mohammed M, Palermo, Richard D, Palser, Anne L, Grayson, Nicholas E, Kellam, Paul, Correia, Samantha, Szymula, Agnieszka, White, Robert E
Published in Journal of virology (01.12.2017)
Published in Journal of virology (01.12.2017)
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Essential role of inverted repeat in Epstein-Barr virus IR-1 in B cell transformation; geographical variation of the viral genome
Bridges, Ray, Correia, Samantha, Wegner, Fanny, Venturini, Cristina, Palser, Anne, White, Robert E, Kellam, Paul, Breuer, Judith, Farrell, Paul J
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (27.05.2019)
Published in Philosophical transactions of the Royal Society of London. Series B. Biological sciences (27.05.2019)
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Evolutionary Dynamics of Local Pandemic H1N1/2009 Influenza Virus Lineages Revealed by Whole-Genome Analysis
BAILLIE, Gregory J, GALIANO, Monica, PLATT, Steven, MCLEAN, Estelle, PEBODY, Richard G, RAMBAUT, Andrew, GREEN, Jonathan, DANIELS, Rod, PYBUS, Oliver G, KELLAM, Paul, ZAMBON, Maria, AGAPOW, Paul-Michael, MYERS, Richard, CHIAM, Rachael, GALL, Astrid, PALSER, Anne L, WATSON, Simon J, HEDGE, Jessica, UNDERWOOD, Anthony
Published in Journal of Virology (01.01.2012)
Published in Journal of Virology (01.01.2012)
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A computational method for immune repertoire mining that identifies novel binders from different clonotypes, demonstrated by identifying anti-pertussis toxoid antibodies
Richardson, Eve, Galson, Jacob D, Kellam, Paul, Kelly, Dominic F, Smith, Sarah E, Palser, Anne, Watson, Simon, Deane, Charlotte M
Published in mAbs (01.01.2021)
Published in mAbs (01.01.2021)
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Systematic analysis of Kaposi's sarcoma (KS)‐associated herpesvirus genomes from a KS case‐control study in Cameroon: Evidence of dual infections but no association between viral sequence variation and KS risk
Marshall, Vickie A., Fisher, Nicholas C., Goodman, Charles A., Cornejo Castro, Elena M., Liu, Isabella, Khanal, Sirish, Holdridge, Benjamin M., Thorpe, Abigail L., Labo, Nazzarena, Stolka, Kristen B., Hemingway‐Foday, Jennifer J., Abassora, Mahamat, N'Dom, Paul, Smith, Jennifer S., Sallah, Neneh, Palser, Anne L., Kellam, Paul, Keele, Brandon F., Whitby, Denise
Published in International journal of cancer (01.10.2022)
Published in International journal of cancer (01.10.2022)
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Journal Article
Capturing needles in haystacks: a comparison of B-cell receptor sequencing methods
Bashford-Rogers, Rachael J M, Palser, Anne L, Idris, Saad F, Carter, Lisa, Epstein, Michael, Callard, Robin E, Douek, Daniel C, Vassiliou, George S, Follows, George A, Hubank, Mike, Kellam, Paul
Published in BMC immunology (05.08.2014)
Published in BMC immunology (05.08.2014)
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A viral discovery methodology for clinical biopsy samples utilising massively parallel next generation sequencing
Daly, Gordon M, Bexfield, Nick, Heaney, Judith, Stubbs, Sam, Mayer, Antonia P, Palser, Anne, Kellam, Paul, Drou, Nizar, Caccamo, Mario, Tiley, Laurence, Alexander, Graeme J M, Bernal, William, Heeney, Jonathan L
Published in PloS one (21.12.2011)
Published in PloS one (21.12.2011)
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Discovery of a polyomavirus in European badgers (Meles meles) and the evolution of host range in the family Polyomaviridae
Hill, Sarah C, Murphy, Aisling A, Cotten, Matthew, Palser, Anne L, Benson, Phillip, Lesellier, Sandrine, Gormley, Eamonn, Richomme, Céline, Grierson, Sylvia, Bhuachalla, Deirdre Ni, Chambers, Mark, Kellam, Paul, Boschiroli, María-Laura, Ehlers, Bernhard, Jarvis, Michael A, Pybus, Oliver G
Published in Journal of general virology (01.06.2015)
Published in Journal of general virology (01.06.2015)
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Dynamic variation of CD5 surface expression levels within individual chronic lymphocytic leukemia clones
Bashford-Rogers, Rachael J.M, Palser, Anne L, Hodkinson, Clare, Baxter, Joanna, Follows, George A, Vassiliou, George S, Kellam, Paul
Published in Experimental hematology (01.02.2017)
Published in Experimental hematology (01.02.2017)
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