Subsistence strategies in traditional societies distinguish gut microbiomes
Obregon-Tito, Alexandra J, Tito, Raul Y, Metcalf, Jessica, Sankaranarayanan, Krithivasan, Clemente, Jose C, Ursell, Luke K, Zech Xu, Zhenjiang, Van Treuren, Will, Knight, Rob, Gaffney, Patrick M, Spicer, Paul, Lawson, Paul, Marin-Reyes, Luis, Trujillo-Villarroel, Omar, Foster, Morris, Guija-Poma, Emilio, Troncoso-Corzo, Luzmila, Warinner, Christina, Ozga, Andrew T, Lewis, Cecil M
Published in Nature communications (25.03.2015)
Published in Nature communications (25.03.2015)
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Journal Article
Differential preservation of endogenous human and microbial DNA in dental calculus and dentin
Mann, Allison E, Sabin, Susanna, Ziesemer, Kirsten, Vågene, Åshild J, Schroeder, Hannes, Ozga, Andrew T, Sankaranarayanan, Krithivasan, Hofman, Courtney A, Fellows Yates, James A, Salazar-García, Domingo C, Frohlich, Bruno, Aldenderfer, Mark, Hoogland, Menno, Read, Christopher, Milner, George R, Stone, Anne C, Lewis, Jr, Cecil M, Krause, Johannes, Hofman, Corinne, Bos, Kirsten I, Warinner, Christina
Published in Scientific reports (29.06.2018)
Published in Scientific reports (29.06.2018)
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Journal Article
Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification
Ziesemer, Kirsten A, Mann, Allison E, Sankaranarayanan, Krithivasan, Schroeder, Hannes, Ozga, Andrew T, Brandt, Bernd W, Zaura, Egija, Waters-Rist, Andrea, Hoogland, Menno, Salazar-García, Domingo C, Aldenderfer, Mark, Speller, Camilla, Hendy, Jessica, Weston, Darlene A, MacDonald, Sandy J, Thomas, Gavin H, Collins, Matthew J, Lewis, Cecil M, Hofman, Corinne, Warinner, Christina
Published in Scientific reports (13.11.2015)
Published in Scientific reports (13.11.2015)
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Journal Article
Successful enrichment and recovery of whole mitochondrial genomes from ancient human dental calculus
Ozga, Andrew T., Nieves-Colón, Maria A., Honap, Tanvi P., Sankaranarayanan, Krithivasan, Hofman, Courtney A., Milner, George R., Lewis Jr, Cecil M., Stone, Anne C., Warinner, Christina
Published in American journal of physical anthropology (01.06.2016)
Published in American journal of physical anthropology (01.06.2016)
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Journal Article
The gut microbiome of exudivorous marmosets in the wild and captivity
Malukiewicz, Joanna, Cartwright, Reed A, Dergam, Jorge A, Igayara, Claudia S, Kessler, Sharon E, Moreira, Silvia B, Nash, Leanne T, Nicola, Patricia A, Pereira, Luiz C M, Pissinatti, Alcides, Ruiz-Miranda, Carlos R, Ozga, Andrew T, Quirino, Adriana A, Roos, Christian, Silva, Daniel L, Stone, Anne C, Grativol, Adriana D
Published in Scientific reports (23.03.2022)
Published in Scientific reports (23.03.2022)
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Journal Article
Analysis of global human gut metagenomes shows that metabolic resilience potential for short-chain fatty acid production is strongly influenced by lifestyle
Jacobson, David K, Honap, Tanvi P, Ozga, Andrew T, Meda, Nicolas, Kagoné, Thérèse S, Carabin, Hélène, Spicer, Paul, Tito, Raul Y, Obregon-Tito, Alexandra J, Reyes, Luis Marin, Troncoso-Corzo, Luzmila, Guija-Poma, Emilio, Sankaranarayanan, Krithivasan, Lewis, Jr, Cecil M
Published in Scientific reports (18.01.2021)
Published in Scientific reports (18.01.2021)
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Journal Article
Publisher Correction: Analysis of global human gut metagenomes shows that metabolic resilience potential for short-chain fatty acid production is strongly influenced by lifestyle
Jacobson, David K, Honap, Tanvi P, Ozga, Andrew T, Meda, Nicolas, Kagoné, Thérèse S, Carabin, Hélène, Spicer, Paul, Tito, Raul Y, Obregon-Tito, Alexandra J, Reyes, Luis Marin, Troncoso-Corzo, Luzmila, Guija-Poma, Emilio, Sankaranarayanan, Krithivasan, Lewis, Jr, Cecil M
Published in Scientific reports (06.05.2021)
Published in Scientific reports (06.05.2021)
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Journal Article
"The dead shall be raised": Multidisciplinary analysis of human skeletons reveals complexity in 19th century immigrant socioeconomic history and identity in New Haven, Connecticut
Aronsen, Gary P, Fehren-Schmitz, Lars, Krigbaum, John, Kamenov, George D, Conlogue, Gerald J, Warinner, Christina, Ozga, Andrew T, Sankaranarayanan, Krithivasan, Griego, Anthony, DeLuca, Daniel W, Eckels, Howard T, Byczkiewicz, Romuald K, Grgurich, Tania, Pelletier, Natalie A, Brownlee, Sarah A, Marichal, Ana, Williamson, Kylie, Tonoike, Yukiko, Bellantoni, Nicholas F
Published in PloS one (09.09.2019)
Published in PloS one (09.09.2019)
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Journal Article
Oral microbiome diversity in chimpanzees from Gombe National Park
Ozga, Andrew T, Gilby, Ian, Nockerts, Rebecca S, Wilson, Michael L, Pusey, Anne, Stone, Anne C
Published in Scientific reports (22.11.2019)
Published in Scientific reports (22.11.2019)
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Journal Article
Gut Microbiome Diversity among Cheyenne and Arapaho Individuals from Western Oklahoma
Sankaranarayanan, Krithivasan, Ozga, Andrew T., Warinner, Christina, Tito, Raul Y., Obregon-Tito, Alexandra J., Xu, Jiawu, Gaffney, Patrick M., Jervis, Lori L., Cox, Derrell, Stephens, Lancer, Foster, Morris, Tallbull, Gloria, Spicer, Paul, Lewis, Cecil M.
Published in Current biology (21.12.2015)
Published in Current biology (21.12.2015)
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Journal Article
Metagenomic analysis of dental calculus in ancient Egyptian baboons
Ottoni, Claudio, Guellil, Meriam, Ozga, Andrew T, Stone, Anne C, Kersten, Oliver, Bramanti, Barbara, Porcier, Stéphanie, Van Neer, Wim
Published in Scientific reports (23.12.2019)
Published in Scientific reports (23.12.2019)
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Journal Article
Poor Oral Health Is Associated With Inflammation, Aortic Valve Calcification, and Brain Volume Among Forager-Farmers
Trumble, Benjamin C, Schwartz, Matthew, Ozga, Andrew T, Schwartz, Gary T, Stojanowski, Christopher M, Jenkins, Carrie L, Kraft, Thomas S, Garcia, Angela R, Cummings, Daniel K, Hooper, Paul L, Eid Rodriguez, Daniel, Buetow, Kenneth, Beheim, Bret, Irimia, Andrei, Thomas, Gregory S, Thompson, Randall C, Gatz, Margaret, Stieglitz, Jonathan, Finch, Caleb E, Gurven, Michael, Kaplan, Hillard
Published in The journals of gerontology. Series A, Biological sciences and medical sciences (01.05.2024)
Published in The journals of gerontology. Series A, Biological sciences and medical sciences (01.05.2024)
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Journal Article
The efficacy of whole human genome capture on ancient dental calculus and dentin
Ziesemer, Kirsten A., Ramos‐Madrigal, Jazmín, Mann, Allison E., Brandt, Bernd W., Sankaranarayanan, Krithivasan, Ozga, Andrew T., Hoogland, Menno, Hofman, Courtney A., Salazar‐García, Domingo C., Frohlich, Bruno, Milner, George R., Stone, Anne C., Aldenderfer, Mark, Lewis, Cecil M., Hofman, Corinne L., Warinner, Christina, Schroeder, Hannes
Published in American journal of physical anthropology (01.03.2019)
Published in American journal of physical anthropology (01.03.2019)
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Journal Article
Urine as a high‐quality source of host genomic DNA from wild populations
Ozga, Andrew T., Webster, Timothy H., Gilby, Ian C., Wilson, Melissa A., Nockerts, Rebecca S., Wilson, Michael L., Pusey, Anne E., Li, Yingying, Hahn, Beatrice H., Stone, Anne C.
Published in Molecular ecology resources (01.01.2021)
Published in Molecular ecology resources (01.01.2021)
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Journal Article
Comparison of two ancient DNA extraction protocols for skeletal remains from tropical environments
Nieves‐Colón, Maria A., Ozga, Andrew T., Pestle, William J., Cucina, Andrea, Tiesler, Vera, Stanton, Travis W., Stone, Anne C.
Published in American journal of physical anthropology (01.08.2018)
Published in American journal of physical anthropology (01.08.2018)
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Journal Article
Understanding Turkey Management in the Mimbres Valley of Southwestern New Mexico Using Ancient Mitochondrial DNA and Stable Isotopes
Dolan, Sean G., Ozga, Andrew T., Laumbach, Karl W., Krigbaum, John, Manin, Aurélie, Schwartz, Christopher W., Stone, Anne C., Knudson, Kelly J.
Published in American antiquity (01.01.2023)
Published in American antiquity (01.01.2023)
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Journal Article
Oral microbiome diversity among Cheyenne and Arapaho individuals from Oklahoma
Ozga, Andrew T., Sankaranarayanan, Krithivasan, Tito, Raúl Y., Obregon-Tito, Alexandra J., Foster, Morris W., Tallbull, Gloria, Spicer, Paul, Warinner, Christina G., Lewis Jr, Cecil M.
Published in American journal of physical anthropology (01.10.2016)
Published in American journal of physical anthropology (01.10.2016)
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Journal Article
Understanding the microbial biogeography of ancient human dentitions to guide study design and interpretation
Fagernäs, Zandra, Salazar-García, Domingo C, Haber Uriarte, María, Avilés Fernández, Azucena, Henry, Amanda G, Lomba Maurandi, Joaquín, Ozga, Andrew T, Velsko, Irina M, Warinner, Christina
Published in FEMS microbes (2022)
Published in FEMS microbes (2022)
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Journal Article
Clostridium amazonense sp. nov. an obliqately anaerobic bacterium isolated from a remote Amazonian community in Peru
O'Neal, Lindsey, Obregón-Tito, Alexandra J., Tito, Raul Y., Ozga, Andrew T., Polo, Susan I., Lewis, Cecil M., Lawson, Paul A.
Published in Anaerobe (01.10.2015)
Published in Anaerobe (01.10.2015)
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