Disentangling the genetic basis of rhizosphere microbiome assembly in tomato
Oyserman, Ben O., Flores, Stalin Sarango, Griffioen, Thom, Pan, Xinya, van der Wijk, Elmar, Pronk, Lotte, Lokhorst, Wouter, Nurfikari, Azkia, Paulson, Joseph N., Movassagh, Mercedeh, Stopnisek, Nejc, Kupczok, Anne, Cordovez, Viviane, Carrión, Víctor J., Ligterink, Wilco, Snoek, Basten L., Medema, Marnix H., Raaijmakers, Jos M.
Published in Nature communications (16.06.2022)
Published in Nature communications (16.06.2022)
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Journal Article
Road MAPs to engineer host microbiomes
Oyserman, Ben O, Medema, Marnix H, Raaijmakers, Jos M
Published in Current opinion in microbiology (01.06.2018)
Published in Current opinion in microbiology (01.06.2018)
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Journal Article
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
Ghylin, Trevor W, Garcia, Sarahi L, Moya, Francisco, Oyserman, Ben O, Schwientek, Patrick, Forest, Katrina T, Mutschler, James, Dwulit-Smith, Jeffrey, Chan, Leong-Keat, Martinez-Garcia, Manuel, Sczyrba, Alexander, Stepanauskas, Ramunas, Grossart, Hans-Peter, Woyke, Tanja, Warnecke, Falk, Malmstrom, Rex, Bertilsson, Stefan, McMahon, Katherine D
Published in The ISME Journal (01.12.2014)
Published in The ISME Journal (01.12.2014)
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Journal Article
Enhancing phosphorus removal of photogranules by incorporating polyphosphate accumulating organisms
Trebuch, Lukas M., Sohier, Jasper, Altenburg, Sido, Oyserman, Ben O., Pronk, Mario, Janssen, Marcel, Vet, Louise E.M., Wijffels, René H., Fernandes, Tânia V.
Published in Water research (Oxford) (15.05.2023)
Published in Water research (Oxford) (15.05.2023)
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Journal Article
Extracting the GEMs: Genotype, Environment, and Microbiome Interactions Shaping Host Phenotypes
Oyserman, Ben O, Cordovez, Viviane, Flores, Stalin Sarango, Leite, Marcio F A, Nijveen, Harm, Medema, Marnix H, Raaijmakers, Jos M
Published in Frontiers in microbiology (12.01.2021)
Published in Frontiers in microbiology (12.01.2021)
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Journal Article
Community Assembly and Ecology of Activated Sludge under Photosynthetic Feast–Famine Conditions
Oyserman, Ben O, Martirano, Joseph M, Wipperfurth, Spenser, Owen, Brian R, Noguera, Daniel R, McMahon, Katherine D
Published in Environmental science & technology (21.03.2017)
Published in Environmental science & technology (21.03.2017)
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Journal Article
Restoring degraded microbiome function with self-assembled communities
Gutierrez, Carlos Fernando, Sanabria, Janeth, Raaijmakers, Jos M, Oyserman, Ben O
Published in FEMS microbiology ecology (25.11.2020)
Published in FEMS microbiology ecology (25.11.2020)
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Journal Article
Diversity, distribution, and expression of opsin genes in freshwater lakes
He, Shaomei, Linz, Alexandra M., Stevens, Sarah L. R., Tran, Patricia Q., Moya‐Flores, Francisco, Oyserman, Ben O., Dwulit‐Smith, Jeffrey R., Forest, Katrina T., McMahon, Katherine D.
Published in Molecular ecology (01.06.2023)
Published in Molecular ecology (01.06.2023)
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Journal Article
Ancestral genome reconstruction identifies the evolutionary basis for trait acquisition in polyphosphate accumulating bacteria
Oyserman, Ben O, Moya, Francisco, Lawson, Christopher E, Garcia, Antonio L, Vogt, Mark, Heffernen, Mitchell, Noguera, Daniel R, McMahon, Katherine D
Published in The ISME Journal (01.12.2016)
Published in The ISME Journal (01.12.2016)
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Journal Article
acI Actinobacteria Assemble a Functional Actinorhodopsin with Natively Synthesized Retinal
Dwulit-Smith, Jeffrey R, Hamilton, Joshua J, Stevenson, David M, He, Shaomei, Oyserman, Ben O, Moya-Flores, Francisco, Garcia, Sarahi L, Amador-Noguez, Daniel, McMahon, Katherine D, Forest, Katrina T
Published in Applied and environmental microbiology (15.12.2018)
Published in Applied and environmental microbiology (15.12.2018)
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Journal Article
Metabolic Differentiation of Co-occurring Accumulibacter Clades Revealed through Genome-Resolved Metatranscriptomics
McDaniel, Elizabeth A, Moya-Flores, Francisco, Keene Beach, Natalie, Camejo, Pamela Y, Oyserman, Ben O, Kizaric, Matthew, Khor, Eng Hoe, Noguera, Daniel R, McMahon, Katherine D
Published in mSystems (31.08.2021)
Published in mSystems (31.08.2021)
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Journal Article
Phylogenetic relationships of a major diversification of Croton (Euphorbiaceae) in the western Indian Ocean region
Haber, Elizabeth A., Kainulainen, Kent, Van Ee, Benjamin W., Oyserman, Ben O., Berry, Paul E.
Published in Botanical journal of the Linnean Society (01.04.2017)
Published in Botanical journal of the Linnean Society (01.04.2017)
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Journal Article
Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI
Hamilton, Joshua J, Garcia, Sarahi L, Brown, Brittany S, Oyserman, Ben O, Moya-Flores, Francisco, Bertilsson, Stefan, Malmstrom, Rex R, Forest, Katrina T, McMahon, Katherine D
Published in mSystems (01.07.2017)
Published in mSystems (01.07.2017)
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Journal Article
Metabolic Differentiation of Co-occurring Accumulibacter Clades Revealed through Genome-Resolved Metatranscriptomics
McDaniel, Elizabeth A., Moya-Flores, Francisco, Keene Beach, Natalie, Camejo, Pamela Y., Oyserman, Ben O., Kizaric, Matthew, Khor, Eng Hoe, Noguera, Daniel R., McMahon, Katherine D.
Published in mSystems (01.08.2021)
Published in mSystems (01.08.2021)
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Journal Article
Successive plant growth amplifies genotype-specific assembly of the tomato rhizosphere microbiome
Cordovez, Viviane, Rotoni, Cristina, Dini-Andreote, Francisco, Oyserman, Ben, Carrión, Víctor J., Raaijmakers, Jos M.
Published in The Science of the total environment (10.06.2021)
Published in The Science of the total environment (10.06.2021)
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Journal Article