by Kissler, Stephen M, Fauver, Joseph R, Mack, Christina, Olesen, Scott W, Tai, Caroline, Shiue, Kristin Y, Kalinich, Chaney C, Jednak, Sarah, Ott, Isabel M, Vogels, Chantal B F, Wohlgemuth, Jay, Weisberger, James, DiFiori, John, Anderson, Deverick J, Mancell, Jimmie, Ho, David D, Grubaugh, Nathan D, Grad, Yonatan H
Published in PLoS biology (12.07.2021)

by Fauver, Joseph R., Petrone, Mary E., Hodcroft, Emma B., Shioda, Kayoko, Ehrlich, Hanna Y., Watts, Alexander G., Vogels, Chantal B.F., Brito, Anderson F., Alpert, Tara, Muyombwe, Anthony, Razeq, Jafar, Downing, Randy, Cheemarla, Nagarjuna R., Wyllie, Anne L., Kalinich, Chaney C., Ott, Isabel M., Quick, Joshua, Loman, Nicholas J., Neugebauer, Karla M., Greninger, Alexander L., Jerome, Keith R., Roychoudhury, Pavitra, Xie, Hong, Shrestha, Lasata, Huang, Meei-Li, Pitzer, Virginia E., Iwasaki, Akiko, Omer, Saad B., Khan, Kamran, Bogoch, Isaac I., Martinello, Richard A., Foxman, Ellen F., Landry, Marie L., Neher, Richard A., Ko, Albert I., Grubaugh, Nathan D.
Published in Cell (28.05.2020)

by Ott, Isabel M, Strine, Madison S, Watkins, Anne E, Boot, Maikel, Kalinich, Chaney C, Harden, Christina A, Vogels, Chantal B F, Casanovas-Massana, Arnau, Moore, Adam J, Muenker, M Catherine, Nakahata, Maura, Tokuyama, Maria, Nelson, Allison, Fournier, John, Bermejo, Santos, Campbell, Melissa, Datta, Rupak, Dela Cruz, Charles S, Farhadian, Shelli F, Ko, Albert I, Iwasaki, Akiko, Grubaugh, Nathan D, Wilen, Craig B, Wyllie, Anne L
Published in Emerging infectious diseases (01.04.2021)

by Kudo, Eriko, Israelow, Benjamin, Vogels, Chantal B F, Lu, Peiwen, Wyllie, Anne L, Tokuyama, Maria, Venkataraman, Arvind, Brackney, Doug E, Ott, Isabel M, Petrone, Mary E, Earnest, Rebecca, Lapidus, Sarah, Muenker, M Catherine, Moore, Adam J, Casanovas-Massana, Arnau, Omer, Saad B, Dela Cruz, Charles S, Farhadian, Shelli F, Ko, Albert I, Grubaugh, Nathan D, Iwasaki, Akiko
Published in PLoS biology (07.10.2020)

by Walker, Joseph W, Han, Barbara A, Ott, Isabel M, Drake, John M
Published in PloS one (07.11.2018)

by Baaijens, Jasmijn A, Zulli, Alessandro, Ott, Isabel M, Nika, Ioanna, van der Lugt, Mart J, Petrone, Mary E, Alpert, Tara, Fauver, Joseph R, Kalinich, Chaney C, Vogels, Chantal B F, Breban, Mallery I, Duvallet, Claire, McElroy, Kyle A, Ghaeli, Newsha, Imakaev, Maxim, Mckenzie-Bennett, Malaika F, Robison, Keith, Plocik, Alex, Schilling, Rebecca, Pierson, Martha, Littlefield, Rebecca, Spencer, Michelle L, Simen, Birgitte B, Hanage, William P, Grubaugh, Nathan D, Peccia, Jordan, Baym, Michael
Published in Genome Biology (08.11.2022)

by Vogels, Chantal B F, Hill, Verity, Breban, Mallery I, Chaguza, Chrispin, Paul, Lauren M, Sodeinde, Afeez, Taylor-Salmon, Emma, Ott, Isabel M, Petrone, Mary E, Dijk, Dennis, Jonges, Marcel, Welkers, Matthijs R A, Locksmith, Timothy, Dong, Yibo, Tarigopula, Namratha, Tekin, Omer, Schmedes, Sarah, Bunch, Sylvia, Cano, Natalia, Jaber, Rayah, Panzera, Charles, Stryker, Ian, Vergara, Julieta, Zimler, Rebecca, Kopp, Edgar, Heberlein, Lea, Herzog, Kaylee S, Fauver, Joseph R, Morrison, Andrea M, Michael, Scott F, Grubaugh, Nathan D
Published in BMC genomics (01.05.2024)

by Kalinich, Chaney C, Jensen, Cole G, Neugebauer, Peter, Petrone, Mary E, Peña-Hernández, Mario, Ott, Isabel M, Wyllie, Anne L, Alpert, Tara, Vogels, Chantal B F, Fauver, Joseph R, Grubaugh, Nathan D, Brito, Anderson F
Published in PLoS biology (21.08.2020)

by Lucas, Carolina, Wong, Patrick, Klein, Jon, Castro, Tiago B R, Silva, Julio, Sundaram, Maria, Ellingson, Mallory K, Mao, Tianyang, Oh, Ji Eun, Israelow, Benjamin, Takahashi, Takehiro, Tokuyama, Maria, Lu, Peiwen, Venkataraman, Arvind, Park, Annsea, Mohanty, Subhasis, Wang, Haowei, Wyllie, Anne L, Vogels, Chantal B F, Earnest, Rebecca, Lapidus, Sarah, Ott, Isabel M, Moore, Adam J, Muenker, M Catherine, Fournier, John B, Campbell, Melissa, Odio, Camila D, Casanovas-Massana, Arnau, Herbst, Roy, Shaw, Albert C, Medzhitov, Ruslan, Schulz, Wade L, Grubaugh, Nathan D, Dela Cruz, Charles, Farhadian, Shelli, Ko, Albert I, Omer, Saad B, Iwasaki, Akiko
Published in Nature (London) (20.08.2020)

by Takahashi, Takehiro, Ellingson, Mallory K, Wong, Patrick, Israelow, Benjamin, Lucas, Carolina, Klein, Jon, Silva, Julio, Mao, Tianyang, Oh, Ji Eun, Tokuyama, Maria, Lu, Peiwen, Venkataraman, Arvind, Park, Annsea, Liu, Feimei, Meir, Amit, Sun, Jonathan, Wang, Eric Y, Casanovas-Massana, Arnau, Wyllie, Anne L, Vogels, Chantal B F, Earnest, Rebecca, Lapidus, Sarah, Ott, Isabel M, Moore, Adam J, Shaw, Albert, Fournier, John B, Odio, Camila D, Farhadian, Shelli, Dela Cruz, Charles, Grubaugh, Nathan D, Schulz, Wade L, Ring, Aaron M, Ko, Albert I, Omer, Saad B, Iwasaki, Akiko
Published in Nature (London) (10.12.2020)

by Wang, Eric Y, Mao, Tianyang, Klein, Jon, Dai, Yile, Huck, John D, Jaycox, Jillian R, Liu, Feimei, Zhou, Ting, Israelow, Benjamin, Wong, Patrick, Coppi, Andreas, Lucas, Carolina, Silva, Julio, Oh, Ji Eun, Song, Eric, Perotti, Emily S, Zheng, Neil S, Fischer, Suzanne, Campbell, Melissa, Fournier, John B, Wyllie, Anne L, Vogels, Chantal B F, Ott, Isabel M, Kalinich, Chaney C, Petrone, Mary E, Watkins, Anne E, Dela Cruz, Charles, Farhadian, Shelli F, Schulz, Wade L, Ma, Shuangge, Grubaugh, Nathan D, Ko, Albert I, Iwasaki, Akiko, Ring, Aaron M
Published in Nature (London) (08.07.2021)

by Wyllie, Anne L, Fournier, John, Casanovas-Massana, Arnau, Campbell, Melissa, Tokuyama, Maria, Vijayakumar, Pavithra, Warren, Joshua L, Geng, Bertie, Muenker, M. Catherine, Moore, Adam J, Vogels, Chantal B.F, Petrone, Mary E, Ott, Isabel M, Lu, Peiwen, Venkataraman, Arvind, Lu-Culligan, Alice, Klein, Jonathan, Earnest, Rebecca, Simonov, Michael, Datta, Rupak, Handoko, Ryan, Naushad, Nida, Sewanan, Lorenzo R, Valdez, Jordan, White, Elizabeth B, Lapidus, Sarah, Kalinich, Chaney C, Jiang, Xiaodong, Kim, Daniel J, Kudo, Eriko, Linehan, Melissa, Mao, Tianyang, Moriyama, Miyu, Oh, Ji E, Park, Annsea, Silva, Julio, Song, Eric, Takahashi, Takehiro, Taura, Manabu, Weizman, Orr-El, Wong, Patrick, Yang, Yexin, Bermejo, Santos, Odio, Camila D, Omer, Saad B, Dela Cruz, Charles S, Farhadian, Shelli, Martinello, Richard A, Iwasaki, Akiko, Grubaugh, Nathan D, Ko, Albert I
Published in New England Journal of Medicine (24.09.2020)

by Klein, Jon, Wood, Jamie, Jaycox, Jillian R, Dhodapkar, Rahul M, Lu, Peiwen, Gehlhausen, Jeff R, Tabachnikova, Alexandra, Greene, Kerrie, Tabacof, Laura, Malik, Amyn A, Silva Monteiro, Valter, Silva, Julio, Kamath, Kathy, Zhang, Minlu, Dhal, Abhilash, Ott, Isabel M, Valle, Gabrielee, Peña-Hernández, Mario, Mao, Tianyang, Bhattacharjee, Bornali, Takahashi, Takehiro, Lucas, Carolina, Song, Eric, McCarthy, Dayna, Breyman, Erica, Tosto-Mancuso, Jenna, Dai, Yile, Perotti, Emily, Akduman, Koray, Tzeng, Tiffany J, Xu, Lan, Geraghty, Anna C, Monje, Michelle, Yildirim, Inci, Shon, John, Medzhitov, Ruslan, Lutchmansingh, Denyse, Possick, Jennifer D, Kaminski, Naftali, Omer, Saad B, Krumholz, Harlan M, Guan, Leying, Dela Cruz, Charles S, van Dijk, David, Ring, Aaron M, Putrino, David, Iwasaki, Akiko
Published in Nature (London) (02.11.2023)

by Vogels, Chantal B F, Brito, Anderson F, Wyllie, Anne L, Fauver, Joseph R, Ott, Isabel M, Kalinich, Chaney C, Petrone, Mary E, Casanovas-Massana, Arnau, Catherine Muenker, M, Moore, Adam J, Klein, Jonathan, Lu, Peiwen, Lu-Culligan, Alice, Jiang, Xiaodong, Kim, Daniel J, Kudo, Eriko, Mao, Tianyang, Moriyama, Miyu, Oh, Ji Eun, Park, Annsea, Silva, Julio, Song, Eric, Takahashi, Takehiro, Taura, Manabu, Tokuyama, Maria, Venkataraman, Arvind, Weizman, Orr-El, Wong, Patrick, Yang, Yexin, Cheemarla, Nagarjuna R, White, Elizabeth B, Lapidus, Sarah, Earnest, Rebecca, Geng, Bertie, Vijayakumar, Pavithra, Odio, Camila, Fournier, John, Bermejo, Santos, Farhadian, Shelli, Dela Cruz, Charles S, Iwasaki, Akiko, Ko, Albert I, Landry, Marie L, Foxman, Ellen F, Grubaugh, Nathan D
Published in Nature microbiology (01.10.2020)

by Allicock, Orchid M., Yolda-Carr, Devyn, Earnest, Rebecca, Breban, Mallery I., Vega, Noel, Ott, Isabel M., Kalinich, Chaney, Alpert, Tara, Petrone, Mary E, Wyllie, Anne L.
Published in Progress in biophysics and molecular biology (01.09.2023)

by Mao, Tianyang, Kim, Jooyoung, Peña-Hernández, Mario A, Valle, Gabrielee, Moriyama, Miyu, Luyten, Sophia, Ott, Isabel M, Gomez-Calvo, Maria Luisa, Gehlhausen, Jeff R, Baker, Emily, Israelow, Benjamin, Slade, Martin, Sharma, Lokesh, Liu, Wei, Ryu, Changwan, Korde, Asawari, Lee, Chris J, Silva Monteiro, Valter, Lucas, Carolina, Dong, Huiping, Yang, Yi, Gopinath, Smita, Wilen, Craig B, Palm, Noah, Dela Cruz, Charles S, Iwasaki, Akiko
Published in Proceedings of the National Academy of Sciences - PNAS (30.04.2024)

by Takahashi, Takehiro, Ellingson, Mallory K, Wong, Patrick, Israelow, Benjamin, Lucas, Carolina, Klein, Jon, Silva, Julio, Mao, Tianyang, Oh, Ji Eun, Tokuyama, Maria, Lu, Peiwen, Venkataraman, Arvind, Park, Annsea, Liu, Feimei, Meir, Amit, Sun, Jonathan, Wang, Eric Y, Casanovas-Massana, Arnau, Wyllie, Anne L, Vogels, Chantal B F, Earnest, Rebecca, Lapidus, Sarah, Ott, Isabel M, Moore, Adam J, Shaw, Albert, Fournier, John B, Odio, Camila D, Farhadian, Shelli, Dela Cruz, Charles, Grubaugh, Nathan D, Schulz, Wade L, Ring, Aaron M, Ko, Albert I, Omer, Saad B, Iwasaki, Akiko
Published in Nature (London) (23.09.2021)

by Roberts, Scott C., Foppiano Palacios, Carlo, Grubaugh, Nathan D., Alpert, Tara, Ott, Isabel M., Breban, Mallery I., Martinello, Richard A., Smith, Cindy, Davis, Matthew W., Mcmanus, Dayna, Tirmizi, Samad, Topal, Jeffrey E., Azar, Marwan M., Malinis, Maricar
Published in Transplant infectious disease (01.04.2022)

by Stahlfeld, Anne, Glick, Laura R, Ott, Isabel M, Craft, Samuel B, Yolda-Carr, Devyn, Harden, Christina A, Nakahata, Maura, Farhadian, Shelli F, Grant, Lindsay R, Alexander-Parrish, Ronika, Arguedas, Adriano, Gessner, Bradford D, Weinberger, Daniel M, Wyllie, Anne L
Published in FEMS microbes (2022)

by Petrone, Mary E, Rothman, Jessica E, Breban, Mallery I, Ott, Isabel M, Russell, Alexis, Lasek-Nesselquist, Erica, Badr, Hamada, Kelly, Kevin, Omerza, Greg, Renzette, Nicholas, Watkins, Anne E, Kalinich, Chaney C, Alpert, Tara, Brito, Anderson F, Earnest, Rebecca, Tikhonova, Irina R, Castaldi, Christopher, Kelly, John P, Shudt, Matthew, Plitnick, Jonathan, Schneider, Erasmus, Murphy, Steven, Neal, Caleb, Laszlo, Eva, Altajar, Ahmad, Pearson, Claire, Muyombwe, Anthony, Downing, Randy, Razeq, Jafar, Niccolai, Linda, Wilson, Madeline S, Anderson, Margaret L, Wang, Jianhui, Liu, Chen, Hui, Pei, Mane, Shrikant, Taylor, Bradford P, Hanage, William P, Landry, Marie L, Peaper, David R, Bilguvar, Kaya, Fauver, Joseph R, Vogels, Chantal B F, Gardner, Lauren M, Pitzer, Virginia E, St George, Kirsten, Adams, Mark D, Grubaugh, Nathan D
Published in Communications biology (11.05.2022)