Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology
Plassais, Jocelyn, Kim, Jaemin, Davis, Brian W., Karyadi, Danielle M., Hogan, Andrew N., Harris, Alex C., Decker, Brennan, Parker, Heidi G., Ostrander, Elaine A.
Published in Nature communications (02.04.2019)
Published in Nature communications (02.04.2019)
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Demographic history, selection and functional diversity of the canine genome
Ostrander, Elaine A., Wayne, Robert K., Freedman, Adam H., Davis, Brian W.
Published in Nature reviews. Genetics (01.12.2017)
Published in Nature reviews. Genetics (01.12.2017)
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Genomic Analyses Reveal the Influence of Geographic Origin, Migration, and Hybridization on Modern Dog Breed Development
Parker, Heidi G., Dreger, Dayna L., Rimbault, Maud, Davis, Brian W., Mullen, Alexandra B., Carpintero-Ramirez, Gretchen, Ostrander, Elaine A.
Published in Cell reports (Cambridge) (25.04.2017)
Published in Cell reports (Cambridge) (25.04.2017)
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Genome sequencing highlights the dynamic early history of dogs
Freedman, Adam H, Gronau, Ilan, Schweizer, Rena M, Ortega-Del Vecchyo, Diego, Han, Eunjung, Silva, Pedro M, Galaverni, Marco, Fan, Zhenxin, Marx, Peter, Lorente-Galdos, Belen, Beale, Holly, Ramirez, Oscar, Hormozdiari, Farhad, Alkan, Can, Vilà, Carles, Squire, Kevin, Geffen, Eli, Kusak, Josip, Boyko, Adam R, Parker, Heidi G, Lee, Clarence, Tadigotla, Vasisht, Wilton, Alan, Siepel, Adam, Bustamante, Carlos D, Harkins, Timothy T, Nelson, Stanley F, Ostrander, Elaine A, Marques-Bonet, Tomas, Wayne, Robert K, Novembre, John
Published in PLoS genetics (01.01.2014)
Published in PLoS genetics (01.01.2014)
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Patagonian sheepdog: Genomic analyses trace the footprints of extinct UK herding dogs to South America
Barrios, Natasha, González-Lagos, César, Dreger, Dayna L, Parker, Heidi G, Nourdin-Galindo, Guillermo, Hogan, Andrew N, Gómez, Marcelo A, Ostrander, Elaine A
Published in PLoS genetics (28.04.2022)
Published in PLoS genetics (28.04.2022)
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Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture
Meadows, Jennifer R S, Kidd, Jeffrey M, Wang, Guo-Dong, Parker, Heidi G, Schall, Peter Z, Bianchi, Matteo, Christmas, Matthew J, Bougiouri, Katia, Buckley, Reuben M, Hitte, Christophe, Nguyen, Anthony K, Wang, Chao, Jagannathan, Vidhya, Niskanen, Julia E, Frantz, Laurent A F, Arumilli, Meharji, Hundi, Sruthi, Lindblad-Toh, Kerstin, Ginja, Catarina, Agustina, Kadek Karang, André, Catherine, Boyko, Adam R, Davis, Brian W, Drögemüller, Michaela, Feng, Xin-Yao, Gkagkavouzis, Konstantinos, Iliopoulos, Giorgos, Harris, Alexander C, Hytönen, Marjo K, Kalthoff, Daniela C, Liu, Yan-Hu, Lymberakis, Petros, Poulakakis, Nikolaos, Pires, Ana Elisabete, Racimo, Fernando, Ramos-Almodovar, Fabian, Savolainen, Peter, Venetsani, Semina, Tammen, Imke, Triantafyllidis, Alexandros, vonHoldt, Bridgett, Wayne, Robert K, Larson, Greger, Nicholas, Frank W, Lohi, Hannes, Leeb, Tosso, Zhang, Ya-Ping, Ostrander, Elaine A
Published in Genome Biology (15.08.2023)
Published in Genome Biology (15.08.2023)
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A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids
vonHoldt, Bridgett M, Pollinger, John P, Earl, Dent A, Knowles, James C, Boyko, Adam R, Parker, Heidi, Geffen, Eli, Pilot, Malgorzata, Jedrzejewski, Wlodzimierz, Jedrzejewska, Bogumila, Sidorovich, Vadim, Greco, Claudia, Randi, Ettore, Musiani, Marco, Kays, Roland, Bustamante, Carlos D, Ostrander, Elaine A, Novembre, John, Wayne, Robert K
Published in Genome research (01.08.2011)
Published in Genome research (01.08.2011)
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A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs
Mosher, Dana S, Quignon, Pascale, Bustamante, Carlos D, Sutter, Nathan B, Mellersh, Cathryn S, Parker, Heidi G, Ostrander, Elaine A
Published in PLoS genetics (01.05.2007)
Published in PLoS genetics (01.05.2007)
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DNA methylation and cis-regulation of gene expression by prostate cancer risk SNPs
Dai, James Y, Wang, Xiaoyu, Wang, Bo, Sun, Wei, Jordahl, Kristina M, Kolb, Suzanne, Nyame, Yaw A, Wright, Jonathan L, Ostrander, Elaine A, Feng, Ziding, Stanford, Janet L
Published in PLoS genetics (30.03.2020)
Published in PLoS genetics (30.03.2020)
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A simple genetic architecture underlies morphological variation in dogs
Boyko, Adam R, Quignon, Pascale, Li, Lin, Schoenebeck, Jeffrey J, Degenhardt, Jeremiah D, Lohmueller, Kirk E, Zhao, Keyan, Brisbin, Abra, Parker, Heidi G, vonHoldt, Bridgett M, Cargill, Michele, Auton, Adam, Reynolds, Andy, Elkahloun, Abdel G, Castelhano, Marta, Mosher, Dana S, Sutter, Nathan B, Johnson, Gary S, Novembre, John, Hubisz, Melissa J, Siepel, Adam, Wayne, Robert K, Bustamante, Carlos D, Ostrander, Elaine A
Published in PLoS biology (01.08.2010)
Published in PLoS biology (01.08.2010)
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Homologous Mutation to Human BRAF V600E Is Common in Naturally Occurring Canine Bladder Cancer--Evidence for a Relevant Model System and Urine-Based Diagnostic Test
Decker, Brennan, Parker, Heidi G, Dhawan, Deepika, Kwon, Erika M, Karlins, Eric, Davis, Brian W, Ramos-Vara, José A, Bonney, Patty L, McNiel, Elizabeth A, Knapp, Deborah W, Ostrander, Elaine A
Published in Molecular cancer research (01.06.2015)
Published in Molecular cancer research (01.06.2015)
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Canine Cancer Genomics: Lessons for Canine and Human Health
Ostrander, Elaine A, Dreger, Dayna L, Evans, Jacquelyn M
Published in Annual review of animal biosciences (15.02.2019)
Published in Annual review of animal biosciences (15.02.2019)
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Variation of BMP3 contributes to dog breed skull diversity
Schoenebeck, Jeffrey J, Hutchinson, Sarah A, Byers, Alexandra, Beale, Holly C, Carrington, Blake, Faden, Daniel L, Rimbault, Maud, Decker, Brennan, Kidd, Jeffrey M, Sood, Raman, Boyko, Adam R, Fondon, 3rd, John W, Wayne, Robert K, Bustamante, Carlos D, Ciruna, Brian, Ostrander, Elaine A
Published in PLoS genetics (01.08.2012)
Published in PLoS genetics (01.08.2012)
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Biallelic BRCA2 Mutations Shape the Somatic Mutational Landscape of Aggressive Prostate Tumors
Decker, Brennan, Karyadi, Danielle M., Davis, Brian W., Karlins, Eric, Tillmans, Lori S., Stanford, Janet L., Thibodeau, Stephen N., Ostrander, Elaine A.
Published in American journal of human genetics (05.05.2016)
Published in American journal of human genetics (05.05.2016)
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Molecular and Evolutionary History of Melanism in North American Gray Wolves
Anderson, Tovi M, vonHoldt, Bridgett M, Candille, Sophie I, Musiani, Marco, Greco, Claudia, Stahler, Daniel R, Smith, Douglas W, Padhukasahasram, Badri, Randi, Ettore, Leonard, Jennifer A, Bustamante, Carlos D, Ostrander, Elaine A, Tang, Hua, Wayne, Robert K, Barsh, Gregory S
Published in Science (American Association for the Advancement of Science) (06.03.2009)
Published in Science (American Association for the Advancement of Science) (06.03.2009)
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Analysis of large versus small dogs reveals three genes on the canine X chromosome associated with body weight, muscling and back fat thickness
Plassais, Jocelyn, Rimbault, Maud, Williams, Falina J, Davis, Brian W, Schoenebeck, Jeffrey J, Ostrander, Elaine A
Published in PLoS genetics (03.03.2017)
Published in PLoS genetics (03.03.2017)
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Multi-omics approach identifies germline regulatory variants associated with hematopoietic malignancies in retriever dog breeds
Evans, Jacquelyn M, Parker, Heidi G, Rutteman, Gerard R, Plassais, Jocelyn, Grinwis, Guy C M, Harris, Alexander C, Lana, Susan E, Ostrander, Elaine A
Published in PLoS genetics (13.05.2021)
Published in PLoS genetics (13.05.2021)
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RNAseq expression patterns of canine invasive urothelial carcinoma reveal two distinct tumor clusters and shared regions of dysregulation with human bladder tumors
Parker, Heidi G, Dhawan, Deepika, Harris, Alex C, Ramos-Vara, Jose A, Davis, Brian W, Knapp, Deborah W, Ostrander, Elaine A
Published in BMC cancer (24.03.2020)
Published in BMC cancer (24.03.2020)
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