InterTransViewer: a comparative description of differential gene expression profiles from different experiments
Tyapkin, А V, Lavrekha, V V, Ubogoeva, E V, Oshchepkov, D Yu, Omelyanchuk, N A, Zemlyanskaya, E V
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2023)
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2023)
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RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research
Chadaeva, I V, Filonov, S V, Zolotareva, K A, Khandaev, B M, Ershov, N I, Podkolodnyy, N L, Kozhemyakina, R V, Rasskazov, D A, Bogomolov, A G, Kondratyuk, E Yu, Klimova, N V, Shikhevich, S G, Ryazanova, M A, Fedoseeva, L A, Redina, О Е, Kozhevnikova, O S, Stefanova, N A, Kolosova, N G, Markel, A L, Ponomarenko, M P, Oshchepkov, D Yu
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2023)
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2023)
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A bioinformatic search for correspondence between differentially expressed genes of domestic versus wild animals and orthologous human genes altering reproductive potential
Ponomarenko, M P, Chadaeva, I V, Ponomarenko, P M, Bogomolov, A G, Oshchepkov, D Yu, Sharypova, E B, Suslov, V V, Osadchuk, A V, Osadchuk, L V, Matushkin, Yu G
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.02.2022)
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.02.2022)
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Journal Article
Migration of primordial germline cells is negatively regulated by surrounding somatic cells during early embryogenesis in Drosophila melanogaster
Dorogova, N V, Khruscheva, A S, Galimova, Iu A, Oshchepkov, D Yu, Maslov, D E, Shvedkina, E D, Akhmetova, K A, Fedorova, S A
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.08.2020)
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.08.2020)
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Detection of conserved physico-chemical characteristics of proteins by analyzing clusters of positions with co-ordinated substitutions
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Conference Proceeding
Analysis and recognition of the GAGA transcription factor binding sites in Drosophila genes
Omelina, E.S., Baricheva, E.M., Oshchepkov, D.Yu, Merkulova, T.I.
Published in Computational biology and chemistry (14.12.2011)
Published in Computational biology and chemistry (14.12.2011)
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The impact of terahertz radiation on an extremophilic archaean Halorubrum saccharovorum proteome
Goryachkovskaya, T. N., Konstantinova, S. H., Meshcheriakova, I. A., Bannikova, S. V., Demidov, E. A., Bryanskaya, A. V., Scheglov, M. A., Semenov, A. I., Oshchepkov, D. Yu, Popik, V. M., Peltek, S. E.
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.02.2017)
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.02.2017)
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Journal Article
Bioinformatical and experimental approaches to investigation of transcription factor binding sites in vertebrate genes
Merkulova, T I, Oshchepkov, D Yu, Ignatieva, E V, Ananko, E A, Levitsky, V G, Vasiliev, G V, Klimova, N V, Merkulov, V M, Kolchanov, N A
Published in Biochemistry (Moscow) (01.11.2007)
Published in Biochemistry (Moscow) (01.11.2007)
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Journal Article
Detection of target genes of FOXA transcription factors involved in proliferation control
Bryzgalov, L O, Ershov, N I, Oshchepkov, D Yu, Kaledin, V I, Merkulova, T I
Published in Biochemistry (Moscow) (01.01.2008)
Published in Biochemistry (Moscow) (01.01.2008)
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Development of computational methods to search for FoxA transcription factor binding sites, their experimental verification and application to the analysis of ChIP-seq data
Levitsky, V. G., Oshchepkov, D. Yu, Ershov, N. I., Bryzgalov, L. O., Antontseva, E. V., Vasiliev, G. V., Merkulova, T. I., Kolchanov, N. A.
Published in Doklady. Biochemistry and biophysics (01.02.2011)
Published in Doklady. Biochemistry and biophysics (01.02.2011)
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Search for new binding sites for the transcriptional factor SF-1 by the SITECON method: experimental verification and analysis of regulatory regions of orthologous genes
Ignat'eva, E V, Klimova, N V, Oshchepkov, D Y, Vasil'ev, G V, Merkulova, T I, Kolchanov, N A
Published in Doklady. Biochemistry and biophysics (01.08.2007)
Published in Doklady. Biochemistry and biophysics (01.08.2007)
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Journal Article
Effect of flanking sequences on the accuracy of the recognition of transcription factor binding sites
Khlebodarova, T. M., Oshchepkov, D. Yu, Levitsky, V. G., Podkolodnaya, O. A., Ignatieva, E. V., Ananko, E. A., Stepanenko, I. L., Kolchanov, N. A.
Published in Russian journal of genetics. Applied research (17.07.2015)
Published in Russian journal of genetics. Applied research (17.07.2015)
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Journal Article
RECONSTRUCTION OF MECHANISMS REGULATING THE EXPRESSION OF THE ESCHERICHIA COLI YFIA GENE UNDER STRESS CONDITIONS
T. M. Khlebodarova, D. Yu. Oshchepkov, N. V. Tikunova, I. V. Babkin, A. D. Gruzdev, V. A. Likhoshvai
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2014)
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Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.12.2014)
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Reconstruction of the mechanisms that regulate the expression of the Escherihia coli yfiA gene under stress conditions
Khlebodarova, T. M., Oshchepkov, D. Yu, Tikunova, N. V., Babkin, I. V., Gruzdev, A. D., Likhoshvai, V. A.
Published in Russian journal of genetics. Applied research (01.07.2013)
Published in Russian journal of genetics. Applied research (01.07.2013)
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Journal Article
EFFECT OF FLANKING SEQUENCES ON THE ACCURACY OF THE RECOGNITION OF TRANSCRIPTION FACTOR BINDING SITES
T. M. Khlebodarova, D. Yu. Oshchepkov, V. G. Levitsky, O. A. Podkolodnaya, E. V. Ignatieva, E. A. Ananko, I. L. Stepanenko, N. A. Kolchanov
Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.01.2015)
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Published in Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii (01.01.2015)
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