Machine Learning-Enhanced T Cell Neoepitope Discovery for Immunotherapy Design
Martins, Joana, Magalhães, Carlos, Rocha, Miguel, Osório, Nuno S
Published in Cancer Informatics (2019)
Published in Cancer Informatics (2019)
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Book Review
Journal Article
Correction: A Prediction Rule to Stratify Mortality Risk of Patients with Pulmonary Tuberculosis
Bastos, Helder Novais, Osório, Nuno S, Castro, António Gil, Ramos, Angélica, Carvalho, Teresa, Meira, Leonor, Araújo, David, Almeida, Leonor, Boaventura, Rita, Fragata, Patrícia, Chaves, Catarina, Costa, Patrício, Portela, Miguel, Ferreira, Ivo, Magalhães, Sara Pinto, Rodrigues, Fernando, Castro, Rui Sarmento, Duarte, Raquel, Guimarães, João Tiago, Saraiva, Margarida
Published in PloS one (11.11.2020)
Published in PloS one (11.11.2020)
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Journal Article
Evolutionary Genetics of Mycobacterium tuberculosis and HIV-1: "The Tortoise and the Hare"
Santos-Pereira, Ana, Magalhães, Carlos, Araújo, Pedro M M, S Osório, Nuno
Published in Microorganisms (Basel) (11.01.2021)
Published in Microorganisms (Basel) (11.01.2021)
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Journal Article
Mycobacterium tuberculosis Complex Exhibits Lineage-Specific Variations Affecting Protein Ductility and Epitope Recognition
Yruela, Inmaculada, Contreras-Moreira, Bruno, Magalhães, Carlos, Osório, Nuno S, Gonzalo-Asensio, Jesús
Published in Genome biology and evolution (01.12.2016)
Published in Genome biology and evolution (01.12.2016)
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Journal Article
Drawings as snapshots of student cellular anatomy understanding
Osório, Nuno S, Rodrigues, Fernando, Garcia, Eduardo A, Costa, Manuel J
Published in Medical education (01.11.2013)
Published in Medical education (01.11.2013)
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Journal Article
Mycobacterium tuberculosis associated with severe tuberculosis evades cytosolic surveillance systems and modulates IL-1β production
Sousa, Jeremy, Cá, Baltazar, Maceiras, Ana Raquel, Simões-Costa, Luisa, Fonseca, Kaori L, Fernandes, Ana Isabel, Ramos, Angélica, Carvalho, Teresa, Barros, Leandro, Magalhães, Carlos, Chiner-Oms, Álvaro, Machado, Henrique, Veiga, Maria Isabel, Singh, Albel, Pereira, Rui, Amorim, António, Vieira, Jorge, Vieira, Cristina P, Bhatt, Apoorva, Rodrigues, Fernando, Rodrigues, Pedro N S, Gagneux, Sebastien, Castro, António Gil, Guimarães, João Tiago, Bastos, Helder Novais, Osório, Nuno S, Comas, Iñaki, Saraiva, Margarida
Published in Nature communications (23.04.2020)
Published in Nature communications (23.04.2020)
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Journal Article
Tuberculosis caused by Mycobacterium africanum: Knowns and unknowns
Silva, Marta L, Cá, Baltazar, Osório, Nuno S, Rodrigues, Pedro N S, Maceiras, Ana Raquel, Saraiva, Margarida
Published in PLoS pathogens (01.05.2022)
Published in PLoS pathogens (01.05.2022)
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Journal Article
The impact of single-cell genomics on the field of mycobacterial infection
Geraldes, Inês, Fernandes, Mónica, Fraga, Alexandra G., Osório, Nuno S.
Published in Frontiers in microbiology (30.09.2022)
Published in Frontiers in microbiology (30.09.2022)
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Journal Article
Increased circulation time of Plasmodium falciparum underlies persistent asymptomatic infection in the dry season
Andrade, Carolina M, Fleckenstein, Hannah, Thomson-Luque, Richard, Doumbo, Safiatou, Lima, Nathalia F, Anderson, Carrie, Hibbert, Julia, Hopp, Christine S, Tran, Tuan M, Li, Shanping, Niangaly, Moussa, Cisse, Hamidou, Doumtabe, Didier, Skinner, Jeff, Sturdevant, Dan, Ricklefs, Stacy, Virtaneva, Kimmo, Asghar, Muhammad, Homann, Manijeh Vafa, Turner, Louise, Martins, Joana, Allman, Erik L, N'Dri, Marie-Esther, Winkler, Volker, Llinás, Manuel, Lavazec, Catherine, Martens, Craig, Färnert, Anna, Kayentao, Kassoum, Ongoiba, Aissata, Lavstsen, Thomas, Osório, Nuno S, Otto, Thomas D, Recker, Mario, Traore, Boubacar, Crompton, Peter D, Portugal, Silvia
Published in Nature Medicine (01.12.2020)
Published in Nature Medicine (01.12.2020)
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Journal Article
Magazine Article
Phagosomal removal of fungal melanin reprograms macrophage metabolism to promote antifungal immunity
Gonçalves, Samuel M, Duarte-Oliveira, Cláudio, Campos, Cláudia F, Aimanianda, Vishukumar, Ter Horst, Rob, Leite, Luis, Mercier, Toine, Pereira, Paulo, Fernández-García, Miguel, Antunes, Daniela, Rodrigues, Cláudia S, Barbosa-Matos, Catarina, Gaifem, Joana, Mesquita, Inês, Marques, António, Osório, Nuno S, Torrado, Egídio, Rodrigues, Fernando, Costa, Sandra, Joosten, Leo Ab, Lagrou, Katrien, Maertens, Johan, Lacerda, João F, Campos, Jr, António, Brown, Gordon D, Brakhage, Axel A, Barbas, Coral, Silvestre, Ricardo, van de Veerdonk, Frank L, Chamilos, Georgios, Netea, Mihai G, Latgé, Jean-Paul, Cunha, Cristina, Carvalho, Agostinho
Published in Nature communications (08.05.2020)
Published in Nature communications (08.05.2020)
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Journal Article
Evolutionary dynamics of HIV-1 subtype C in Brazil
Souto, Bernardino, Triunfante, Vera, Santos-Pereira, Ana, Martins, Joana, Araújo, Pedro M M, Osório, Nuno S
Published in Scientific reports (29.11.2021)
Published in Scientific reports (29.11.2021)
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Journal Article
Plasmodium falciparum transcription in different clinical presentations of malaria associates with circulation time of infected erythrocytes
Thomson-Luque, Richard, Votborg-Novél, Lasse, Ndovie, Wanangwa, Andrade, Carolina M, Niangaly, Moussa, Attipa, Charalampos, Lima, Nathalia F, Coulibaly, Drissa, Doumtabe, Didier, Guindo, Bouréima, Tangara, Bourama, Maiga, Fayçal, Kone, Abdoulaye Kassoum, Traore, Karim, Kayentao, Kassoum, Ongoiba, Aissata, Doumbo, Safiatou, Thera, Mahamadou A, Traoré, Boubacar, Seydel, Karl, Osório, Nuno S, Portugal, Silvia
Published in Nature communications (30.07.2021)
Published in Nature communications (30.07.2021)
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Journal Article
A Prediction Rule to Stratify Mortality Risk of Patients with Pulmonary Tuberculosis
Bastos, Helder Novais, Osório, Nuno S, Castro, António Gil, Ramos, Angélica, Carvalho, Teresa, Meira, Leonor, Araújo, David, Almeida, Leonor, Boaventura, Rita, Fragata, Patrícia, Chaves, Catarina, Costa, Patrício, Portela, Miguel, Ferreira, Ivo, Magalhães, Sara Pinto, Rodrigues, Fernando, Sarmento-Castro, Rui, Duarte, Raquel, Guimarães, João Tiago, Saraiva, Margarida
Published in PloS one (16.09.2016)
Published in PloS one (16.09.2016)
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Journal Article
Deregulated immune cell recruitment orchestrated by c-MET impairs pulmonary inflammation and fibrosis
Barbosa-Matos, Catarina, Borges-Pereira, Caroline, Libório-Ramos, Sofia, Fernandes, Raquel, Oliveira, Marcela, Mendes-Frias, Ana, Silvestre, Ricardo, Osório, Nuno S, Bastos, Hélder N, Santos, Rita F, Guimarães, Susana, Morais, António, Mazzone, Massimiliano, Carvalho, Agostinho, Cunha, Cristina, Costa, Sandra
Published in Respiratory research (22.06.2024)
Published in Respiratory research (22.06.2024)
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Journal Article
Nationwide Study of Drug Resistance Mutations in HIV-1 Infected Individuals under Antiretroviral Therapy in Brazil
Santos-Pereira, Ana, Triunfante, Vera, Araújo, Pedro M. M., Martins, Joana, Soares, Helena, Poveda, Eva, Souto, Bernardino, Osório, Nuno S.
Published in International journal of molecular sciences (18.05.2021)
Published in International journal of molecular sciences (18.05.2021)
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Journal Article
Heterogeneous Streptomycin Resistance Level Among Mycobacterium tuberculosis Strains From the Same Transmission Cluster
Rocha, Deisy M. G. C., Magalhães, Carlos, Cá, Baltazar, Ramos, Angelica, Carvalho, Teresa, Comas, Iñaki, Guimarães, João Tiago, Bastos, Helder Novais, Saraiva, Margarida, Osório, Nuno S.
Published in Frontiers in microbiology (11.06.2021)
Published in Frontiers in microbiology (11.06.2021)
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Journal Article