Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV)
Lefkowitz, Elliot J, Dempsey, Donald M, Hendrickson, Robert Curtis, Orton, Richard J, Siddell, Stuart G, Smith, Donald B
Published in Nucleic Acids Research (04.01.2018)
Published in Nucleic Acids Research (04.01.2018)
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Fundamental properties of the mammalian innate immune system revealed by multispecies comparison of type I interferon responses
Shaw, Andrew E, Hughes, Joseph, Gu, Quan, Behdenna, Abdelkader, Singer, Joshua B, Dennis, Tristan, Orton, Richard J, Varela, Mariana, Gifford, Robert J, Wilson, Sam J, Palmarini, Massimo
Published in PLoS biology (18.12.2017)
Published in PLoS biology (18.12.2017)
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In vitro selection of Remdesivir resistance suggests evolutionary predictability of SARS-CoV-2
Szemiel, Agnieszka M, Merits, Andres, Orton, Richard J, MacLean, Oscar A, Pinto, Rute Maria, Wickenhagen, Arthur, Lieber, Gauthier, Turnbull, Matthew L, Wang, Sainan, Furnon, Wilhelm, Suarez, Nicolas M, Mair, Daniel, da Silva Filipe, Ana, Willett, Brian J, Wilson, Sam J, Patel, Arvind H, Thomson, Emma C, Palmarini, Massimo, Kohl, Alain, Stewart, Meredith E
Published in PLoS pathogens (17.09.2021)
Published in PLoS pathogens (17.09.2021)
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50 years of the International Committee on Taxonomy of Viruses: progress and prospects
Adams, Michael J., Lefkowitz, Elliot J., King, Andrew M. Q., Harrach, Balázs, Harrison, Robert L., Knowles, Nick J., Kropinski, Andrew M., Krupovic, Mart, Kuhn, Jens H., Mushegian, Arcady R., Nibert, Max L., Sabanadzovic, Sead, Sanfaçon, Hélène, Siddell, Stuart G., Simmonds, Peter, Varsani, Arvind, Zerbini, Francisco Murilo, Orton, Richard J., Smith, Donald B., Gorbalenya, Alexander E., Davison, Andrew J.
Published in Archives of virology (01.05.2017)
Published in Archives of virology (01.05.2017)
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Whole genome sequencing reveals local transmission patterns of Mycobacterium bovis in sympatric cattle and badger populations
Biek, Roman, O'Hare, Anthony, Wright, David, Mallon, Tom, McCormick, Carl, Orton, Richard J, McDowell, Stanley, Trewby, Hannah, Skuce, Robin A, Kao, Rowland R
Published in PLoS pathogens (01.11.2012)
Published in PLoS pathogens (01.11.2012)
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Characterizing and Evaluating the Zoonotic Potential of Novel Viruses Discovered in Vampire Bats
Bergner, Laura M, Mollentze, Nardus, Orton, Richard J, Tello, Carlos, Broos, Alice, Biek, Roman, Streicker, Daniel G
Published in Viruses (06.02.2021)
Published in Viruses (06.02.2021)
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Genetic diversity, infection prevalence, and possible transmission routes of Bartonella spp. in vampire bats
Becker, Daniel J, Bergner, Laura M, Bentz, Alexandra B, Orton, Richard J, Altizer, Sonia, Streicker, Daniel G
Published in PLoS neglected tropical diseases (01.09.2018)
Published in PLoS neglected tropical diseases (01.09.2018)
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Mutational signature dynamics indicate SARS-CoV-2's evolutionary capacity is driven by host antiviral molecules
Lamb, Kieran D, Luka, Martha M, Saathoff, Megan, Orton, Richard J, Phan, My V T, Cotten, Matthew, Yuan, Ke, Robertson, David L
Published in PLoS computational biology (25.01.2024)
Published in PLoS computational biology (25.01.2024)
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Evaluating the potential of whole-genome sequencing for tracing transmission routes in experimental infections and natural outbreaks of bovine respiratory syncytial virus
Johnson, Paul C D, Hägglund, Sara, Näslund, Katarina, Meyer, Gilles, Taylor, Geraldine, Orton, Richard J, Zohari, Siamak, Haydon, Daniel T, Valarcher, Jean François
Published in Veterinary research (Paris) (12.12.2022)
Published in Veterinary research (Paris) (12.12.2022)
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The antiviral state has shaped the CpG composition of the vertebrate interferome to avoid self-targeting
Shaw, Andrew E, Rihn, Suzannah J, Mollentze, Nardus, Wickenhagen, Arthur, Stewart, Douglas G, Orton, Richard J, Kuchi, Srikeerthana, Bakshi, Siddharth, Collados, Mila Rodriguez, Turnbull, Matthew L, Busby, Joseph, Gu, Quan, Smollett, Katherine, Bamford, Connor G G, Sugrue, Elena, Johnson, Paul C D, Da Silva, Ana Filipe, Castello, Alfredo, Streicker, Daniel G, Robertson, David L, Palmarini, Massimo, Wilson, Sam J
Published in PLoS biology (07.09.2021)
Published in PLoS biology (07.09.2021)
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Population genomics of louping ill virus provide new insights into the evolution of tick-borne flaviviruses
Clark, Jordan J, Gilray, Janice, Orton, Richard J, Baird, Margaret, Wilkie, Gavin, Filipe, Ana da Silva, Johnson, Nicholas, McInnes, Colin J, Kohl, Alain, Biek, Roman, Powers, Ann M, Holbrook, Michael R
Published in PLoS neglected tropical diseases (01.09.2020)
Published in PLoS neglected tropical diseases (01.09.2020)
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Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway
Orton, Richard J, Sturm, Oliver E, Vyshemirsky, Vladislav, Calder, Muffy, Gilbert, David R, Kolch, Walter
Published in Biochemical journal (01.12.2005)
Published in Biochemical journal (01.12.2005)
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Direct Nanopore Sequencing of Human Cytomegalovirus Genomes from High-Viral-Load Clinical Samples
Li, Kathy K, Lau, Betty, Suárez, Nicolás M, Camiolo, Salvatore, Gunson, Rory, Davison, Andrew J, Orton, Richard J
Published in Viruses (26.05.2023)
Published in Viruses (26.05.2023)
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Quantifying and Cataloguing Unknown Sequences within Human Microbiomes
Modha, Sejal, Robertson, David L, Hughes, Joseph, Orton, Richard J
Published in mSystems (26.04.2022)
Published in mSystems (26.04.2022)
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SARS-CoV-2 in Domestic UK Cats from Alpha to Omicron: Swab Surveillance and Case Reports
Jones, Sarah, Tyson, Grace B, Orton, Richard J, Smollett, Katherine, Manna, Federica, Kwok, Kirsty, Suárez, Nicolás M, Logan, Nicola, McDonald, Michael, Bowie, Andrea, Filipe, Ana Da Silva, Willett, Brian J, Weir, William, Hosie, Margaret J
Published in Viruses (01.08.2023)
Published in Viruses (01.08.2023)
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Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction
Fahnøe, Ulrik, Pedersen, Anders Gorm, Dräger, Carolin, Orton, Richard J, Blome, Sandra, Höper, Dirk, Beer, Martin, Rasmussen, Thomas Bruun
Published in PloS one (20.10.2015)
Published in PloS one (20.10.2015)
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Virus Adaptation and Selection Following Challenge of Animals Vaccinated against Classical Swine Fever Virus
Fahnøe, Ulrik, Pedersen, Anders Gorm, Johnston, Camille Melissa, Orton, Richard J, Höper, Dirk, Beer, Martin, Bukh, Jens, Belsham, Graham J, Rasmussen, Thomas Bruun
Published in Viruses (10.10.2019)
Published in Viruses (10.10.2019)
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Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis
Trewby, Hannah, Wright, David, Breadon, Eleanor L, Lycett, Samantha J, Mallon, Tom R, McCormick, Carl, Johnson, Paul, Orton, Richard J, Allen, Adrian R, Galbraith, Julie, Herzyk, Pawel, Skuce, Robin A, Biek, Roman, Kao, Rowland R
Published in Epidemics (01.03.2016)
Published in Epidemics (01.03.2016)
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