Distribution and storage of inflammatory memory in barrier tissues
Ordovas-Montanes, Jose, Beyaz, Semir, Rakoff-Nahoum, Seth, Shalek, Alex K.
Published in Nature reviews. Immunology (01.05.2020)
Published in Nature reviews. Immunology (01.05.2020)
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Desmosterol suppresses macrophage inflammasome activation and protects against vascular inflammation and atherosclerosis
Zhang, Xinbo, McDonald, Jeffrey G., Aryal, Binod, Canfrán-Duque, Alberto, Goldberg, Emily L., Araldi, Elisa, Ding, Wen, Fan, Yuhua, Thompson, Bonne M., Singh, Abhishek K., Li, Qian, Tellides, George, Ordovás-Montanes, Jose, Milian, Rolando García, Dixit, Vishwa Deep, Ikonen, Elina, Suárez, Yajaira, Fernández-Hernando, Carlos
Published in Proceedings of the National Academy of Sciences - PNAS (23.11.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (23.11.2021)
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Robust differentiation of human enteroendocrine cells from intestinal stem cells
Zeve, Daniel, Stas, Eric, de Sousa Casal, Joshua, Mannam, Prabhath, Qi, Wanshu, Yin, Xiaolei, Dubois, Sarah, Shah, Manasvi S., Syverson, Erin P., Hafner, Sophie, Karp, Jeffrey M., Carlone, Diana L., Ordovas-Montanes, Jose, Breault, David T.
Published in Nature communications (11.01.2022)
Published in Nature communications (11.01.2022)
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Journal Article
Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis
Smillie, Christopher S., Biton, Moshe, Ordovas-Montanes, Jose, Sullivan, Keri M., Burgin, Grace, Graham, Daniel B., Herbst, Rebecca H., Rogel, Noga, Slyper, Michal, Waldman, Julia, Sud, Malika, Andrews, Elizabeth, Velonias, Gabriella, Haber, Adam L., Jagadeesh, Karthik, Vickovic, Sanja, Yao, Junmei, Stevens, Christine, Dionne, Danielle, Nguyen, Lan T., Villani, Alexandra-Chloé, Hofree, Matan, Creasey, Elizabeth A., Huang, Hailiang, Rozenblatt-Rosen, Orit, Garber, John J., Khalili, Hamed, Desch, A. Nicole, Daly, Mark J., Ananthakrishnan, Ashwin N., Shalek, Alex K., Xavier, Ramnik J., Regev, Aviv
Published in Cell (25.07.2019)
Published in Cell (25.07.2019)
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Induced pluripotent stem cells: A novel frontier in the study of human primary immunodeficiencies
Pessach, Itai M., MD, PhD, Ordovas-Montanes, Jose, BA, Zhang, Shen-Ying, MD, Casanova, Jean-Laurent, MD, PhD, Giliani, Silvia, PhD, Gennery, Andrew R., MD, Al-Herz, Waleed, MD, Manos, Philip D., PhD, Schlaeger, Thorsten M., PhD, Park, In-Hyun, PhD, Rucci, Francesca, PhD, Agarwal, Suneet, MD, PhD, Mostoslavsky, Gustavo, MD, PhD, Daley, George Q., MD, Notarangelo, Luigi D., MD
Published in Journal of allergy and clinical immunology (01.06.2011)
Published in Journal of allergy and clinical immunology (01.06.2011)
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Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19
Bernardes, Joana P., Tran, Florian, Best, Lena, Bordoni, Dora, Josephs-Spaulding, Jonathan, Köhler, Philipp, Künstner, Axel, Rosati, Elisa, Bacher, Petra, Bruse, Niklas, Franzenburg, Sören, Frey, Norbert, Fuß, Janina, Glück, Andreas, Hamm, Jacob, Imm, Simon, Kaiser, Sina, Lange, Christoph, Laue, Georg, Marinos, Georgios, Pickkers, Peter, Rabe, Klaus F., Renz, Alina, Röcken, Christoph, Rupp, Jan, Schaffarzyk, Annika, Scheffold, Alexander, Schulte-Schrepping, Jonas, Skowasch, Dirk, Ulas, Thomas, Wandinger, Klaus-Peter, Wittig, Michael, Zimmermann, Johannes, Busch, Hauke, Hoyer, Bimba F., Kaleta, Christoph, Heyckendorf, Jan, Rybniker, Jan, Schultze, Joachim L., Rosenstiel, Philip, Banovich, Nicholas E., Desai, Tushar, Eickelberg, Oliver, Haniffa, Muzlifa, Horvath, Peter, Kropski, Jonathan A., Lafyatis, Robert, Meyer, Kerstin, Nawijn, Martijn C., Nikolic, Marko, Ordovas Montanes, Jose, Pe’er, Dana, Tata, Purushothama Rao, Rawlins, Emma, Regev, Aviv, Reyfman, Paul, Samakovlis, Christos, Schultze, Joachim, Shalek, Alex, Shepherd, Douglas, Spence, Jason, Theis, Fabian, van den Berge, Maarten, von Papen, Michael, Whitsett, Jeffrey, Angelov, Angel, Bals, Robert, Bonifacio, Ezio, Colme-Tatche, Maria, Diefenbach, Andreas, Dilthey, Alexander, Fischer, Nicole, Gagneur, Julien, Goesmann, Alexander, Kallies, René, Kehr, Birte, Keller, Andreas, Kim-Hellmuth, Sarah, Korbel, Jan O., Kurth, Ingo, Landthaler, Markus, Li, Yang, Ludwig, Kerstin, Makarewicz, Oliwia, Nöthen, Markus, Nürnberg, Peter, Ohler, Uwe, Overmann, Jörg, Peter, Silke, Pfeffer, Klaus, Poetsch, Anna R., Rajewsky, Niklaus, Ralser, Markus, Saliba, Antoine-Emmanuel, Schulte, Eva-Christina, Sczyrba, Alexander, Stegle, Oliver, Stoye, Jens, von Kleist, Max, Walker, Andreas
Published in Immunity (15.12.2020)
Published in Immunity (15.12.2020)
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Allergic inflammatory memory in human respiratory epithelial progenitor cells
Ordovas-Montanes, Jose, Dwyer, Daniel F., Nyquist, Sarah K., Buchheit, Kathleen M., Vukovic, Marko, Deb, Chaarushena, Wadsworth, Marc H., Hughes, Travis K., Kazer, Samuel W., Yoshimoto, Eri, Cahill, Katherine N., Bhattacharyya, Neil, Katz, Howard R., Berger, Bonnie, Laidlaw, Tanya M., Boyce, Joshua A., Barrett, Nora A., Shalek, Alex K.
Published in Nature (London) (01.08.2018)
Published in Nature (London) (01.08.2018)
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Single-Cell Analysis of the Liver Epithelium Reveals Dynamic Heterogeneity and an Essential Role for YAP in Homeostasis and Regeneration
Pepe-Mooney, Brian J., Dill, Michael T., Alemany, Anna, Ordovas-Montanes, Jose, Matsushita, Yuki, Rao, Anuradha, Sen, Anushna, Miyazaki, Makoto, Anakk, Sayeepriyadarshini, Dawson, Paul A., Ono, Noriaki, Shalek, Alex K., van Oudenaarden, Alexander, Camargo, Fernando D.
Published in Cell stem cell (03.07.2019)
Published in Cell stem cell (03.07.2019)
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Impaired local intrinsic immunity to SARS-CoV-2 infection in severe COVID-19
Ziegler, Carly G.K., Miao, Vincent N., Owings, Anna H., Navia, Andrew W., Tang, Ying, Bromley, Joshua D., Lotfy, Peter, Sloan, Meredith, Laird, Hannah, Williams, Haley B., George, Micayla, Drake, Riley S., Christian, Taylor, Parker, Adam, Sindel, Campbell B., Burger, Molly W., Pride, Yilianys, Hasan, Mohammad, Abraham, George E., Senitko, Michal, Robinson, Tanya O., Shalek, Alex K., Glover, Sarah C., Horwitz, Bruce H., Ordovas-Montanes, Jose
Published in Cell (02.09.2021)
Published in Cell (02.09.2021)
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Second-Strand Synthesis-Based Massively Parallel scRNA-Seq Reveals Cellular States and Molecular Features of Human Inflammatory Skin Pathologies
Hughes, Travis K., Wadsworth, Marc H., Gierahn, Todd M., Do, Tran, Weiss, David, Andrade, Priscila R., Ma, Feiyang, de Andrade Silva, Bruno J., Shao, Shuai, Tsoi, Lam C., Ordovas-Montanes, Jose, Gudjonsson, Johann E., Modlin, Robert L., Love, J. Christopher, Shalek, Alex K.
Published in Immunity (Cambridge, Mass.) (13.10.2020)
Published in Immunity (Cambridge, Mass.) (13.10.2020)
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Journal Article
Integrated single-cell analysis of multicellular immune dynamics during hyperacute HIV-1 infection
Kazer, Samuel W., Aicher, Toby P., Muema, Daniel M., Carroll, Shaina L., Ordovas-Montanes, Jose, Miao, Vincent N., Tu, Ang A., Ziegler, Carly G. K., Nyquist, Sarah K., Wong, Emily B., Ismail, Nasreen, Dong, Mary, Moodley, Amber, Berger, Bonnie, Love, J. Christopher, Dong, Krista L., Leslie, Alasdair, Ndhlovu, Zaza M., Ndung’u, Thumbi, Walker, Bruce D., Shalek, Alex K.
Published in Nature medicine (01.04.2020)
Published in Nature medicine (01.04.2020)
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Journal Article
Cyclin D3 drives inertial cell cycling in dark zone germinal center B cells
Pae, Juhee, Ersching, Jonatan, Castro, Tiago B R, Schips, Marta, Mesin, Luka, Allon, Samuel J, Ordovas-Montanes, Jose, Mlynarczyk, Coraline, Melnick, Ari, Efeyan, Alejo, Shalek, Alex K, Meyer-Hermann, Michael, Victora, Gabriel D
Published in The Journal of experimental medicine (05.04.2021)
Published in The Journal of experimental medicine (05.04.2021)
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Impaired intrinsic immunity to HSV-1 in human iPSC-derived TLR3-deficient CNS cells
Lafaille, Fabien G., Pessach, Itai M., Zhang, Shen-Ying, Ciancanelli, Michael J., Herman, Melina, Abhyankar, Avinash, Ying, Shui-Wang, Keros, Sotirios, Goldstein, Peter A., Mostoslavsky, Gustavo, Ordovas-Montanes, Jose, Jouanguy, Emmanuelle, Plancoulaine, Sabine, Tu, Edmund, Elkabetz, Yechiel, Al-Muhsen, Saleh, Tardieu, Marc, Schlaeger, Thorsten M., Daley, George Q., Abel, Laurent, Casanova, Jean-Laurent, Studer, Lorenz, Notarangelo, Luigi D.
Published in Nature (London) (29.11.2012)
Published in Nature (London) (29.11.2012)
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Navigating COVID-19: Starting a lab during the pandemic
Ordovás-Montañés, José, Gerlach, Carmen, Moraes-Vieira, Pedro, Vento-Tormo, Roser, Zhang, Conggang, Jurado, Kellie Ann
Published in Immunity (Cambridge, Mass.) (12.10.2021)
Published in Immunity (Cambridge, Mass.) (12.10.2021)
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Journal Article
Human airway mast cells proliferate and acquire distinct inflammation-driven phenotypes during type 2 inflammation
Dwyer, Daniel F, Ordovas-Montanes, Jose, Allon, Samuel J, Buchheit, Kathleen M, Vukovic, Marko, Derakhshan, Tahereh, Feng, Chunli, Lai, Juying, Hughes, Travis K, Nyquist, Sarah K, Giannetti, Matthew P, Berger, Bonnie, Bhattacharyya, Neil, Roditi, Rachel E, Katz, Howard R, Nawijn, Martijn C, Berg, Marijn, van den Berge, Maarten, Laidlaw, Tanya M, Shalek, Alex K, Barrett, Nora A, Boyce, Joshua A
Published in Science immunology (26.02.2021)
Published in Science immunology (26.02.2021)
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A Reproducibility-Based Computational Framework Identifies an Inducible, Enhanced Antiviral State in Dendritic Cells from HIV-1 Elite Controllers
Martin-Gayo, Enrique, Cole, Michael B, Kolb, Kellie E, Ouyang, Zhengyu, Cronin, Jacqueline, Kazer, Samuel W, Ordovas-Montanes, Jose, Lichterfeld, Mathias, Walker, Bruce D, Yosef, Nir, Shalek, Alex K, Yu, Xu G
Published in Genome Biology (29.01.2018)
Published in Genome Biology (29.01.2018)
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Journal Article
Role of Respiratory Epithelial Cells in Allergic Diseases
Jakwerth, Constanze A, Ordovas-Montanes, Jose, Blank, Simon, Schmidt-Weber, Carsten B, Zissler, Ulrich M
Published in Cells (Basel, Switzerland) (20.04.2022)
Published in Cells (Basel, Switzerland) (20.04.2022)
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Screening for modulators of the cellular composition of gut epithelia via organoid models of intestinal stem cell differentiation
Mead, Benjamin E., Hattori, Kazuki, Levy, Lauren, Imada, Shinya, Goto, Norihiro, Vukovic, Marko, Sze, Daphne, Kummerlowe, Conner, Matute, Juan D., Duan, Jinzhi, Langer, Robert, Blumberg, Richard S., Ordovas-Montanes, Jose, Yilmaz, Ömer H., Karp, Jeffrey M., Shalek, Alex K.
Published in Nature biomedical engineering (01.04.2022)
Published in Nature biomedical engineering (01.04.2022)
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Harnessing single-cell genomics to improve the physiological fidelity of organoid-derived cell types
Mead, Benjamin E, Ordovas-Montanes, Jose, Braun, Alexandra P, Levy, Lauren E, Bhargava, Prerna, Szucs, Matthew J, Ammendolia, Dustin A, MacMullan, Melanie A, Yin, Xiaolei, Hughes, Travis K, Wadsworth, 2nd, Marc H, Ahmad, Rushdy, Rakoff-Nahoum, Seth, Carr, Steven A, Langer, Robert, Collins, James J, Shalek, Alex K, Karp, Jeffrey M
Published in BMC biology (05.06.2018)
Published in BMC biology (05.06.2018)
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