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Kaposi's sarcoma-associated herpesviral IL-6 and human IL-6 open reading frames contain miRNA binding sites and are subject to cellular miRNA regulation
Kang, Jeong-Gu, Majerciak, Vladimir, Uldrick, Thomas S, Wang, Xiaohong, Kruhlak, Michael, Yarchoan, Robert, Zheng, Zhi-Ming
Published in The Journal of pathology (01.11.2011)
Published in The Journal of pathology (01.11.2011)
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Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions
Erady, Chaitanya, Boxall, Adam, Puntambekar, Shraddha, Suhas Jagannathan, N., Chauhan, Ruchi, Chong, David, Meena, Narendra, Kulkarni, Apurv, Kasabe, Bhagyashri, Prathivadi Bhayankaram, Kethaki, Umrania, Yagnesh, Andreani, Adam, Nel, Jean, Wayland, Matthew T., Pina, Cristina, Lilley, Kathryn S., Prabakaran, Sudhakaran
Published in Npj genomic medicine (25.01.2021)
Published in Npj genomic medicine (25.01.2021)
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Translational repression of the McKusick–Kaufman syndrome transcript by unique upstream open reading frames encoding mitochondrial proteins with alternative polyadenylation sites
Akimoto, Chizuru, Sakashita, Eiji, Kasashima, Katsumi, Kuroiwa, Kenji, Tominaga, Kaoru, Hamamoto, Toshiro, Endo, Hitoshi
Published in Biochimica et biophysica acta (01.03.2013)
Published in Biochimica et biophysica acta (01.03.2013)
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Computational Analysis and Mapping of Novel Open Reading Frames in Influenza A Viruses
Gong, Yu-Nong, Chen, Guang-Wu, Chen, Chi-Jene, Kuo, Rei-Lin, Shih, Shin-Ru
Published in PloS one (15.12.2014)
Published in PloS one (15.12.2014)
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A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection
Hanada, Kousuke, Zhang, Xu, Borevitz, Justin O., Li, Wen-Hsiung, Shiu, Shin-Han
Published in Genome Research (01.05.2007)
Published in Genome Research (01.05.2007)
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Detecting Individual Sites Subject to Episodic Diversifying Selection
Murrell, Ben, Wertheim, Joel O., Moola, Sasha, Weighill, Thomas, Scheffler, Konrad, Kosakovsky Pond, Sergei L.
Published in PLoS genetics (01.07.2012)
Published in PLoS genetics (01.07.2012)
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Long non-coding RNAs as a source of new peptides
Ruiz-Orera, Jorge, Messeguer, Xavier, Subirana, Juan Antonio, Alba, M Mar
Published in eLife (16.09.2014)
Published in eLife (16.09.2014)
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The hidden bacterial microproteome
Fesenko, Igor, Sahakyan, Harutyun, Dhyani, Rajat, Shabalina, Svetlana A., Storz, Gisela, Koonin, Eugene V.
Published in Molecular cell (06.03.2025)
Published in Molecular cell (06.03.2025)
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Translational Landscape of a C4 Plant, Sorghum bicolor, Under Normal and Sulfur-Deficient Conditions
Sotta, Naoyuki, Chiba, Yukako, Aoyama, Haruka, Takamatsu, Seidai, Suzuki, Takamasa, Miwa, Kyoko, Yamashita, Yui, Naito, Satoshi, Fujiwara, Toru
Published in Plant and cell physiology (16.05.2022)
Published in Plant and cell physiology (16.05.2022)
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Broadly targeted human cytomegalovirus-specific CD4 + and CD8 + T cells dominate the memory compartments of exposed subjects
Sylwester, Andrew W., Mitchell, Bridget L., Edgar, John B., Taormina, Cara, Pelte, Christian, Ruchti, Franziska, Sleath, Paul R., Grabstein, Kenneth H., Hosken, Nancy A., Kern, Florian, Nelson, Jay A., Picker, Louis J.
Published in The Journal of experimental medicine (05.09.2005)
Published in The Journal of experimental medicine (05.09.2005)
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Selection pressure on the hepatitis B virus pre-S/S and P open reading frames in Tongan subjects with a chronic hepatitis B virus infection
Abbott, William G.H., Tsai, Peter, Ross, Howard A., ‘Ofanoa, Malakai, Trevarton, Alexander J., Hornell, John, Munn, Stephen R., Gane, Edward J.
Published in Antiviral research (01.11.2012)
Published in Antiviral research (01.11.2012)
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Evidence for natural antisense transcript-mediated inhibition of microRNA function
Faghihi, Mohammad Ali, Zhang, Ming, Huang, Jia, Modarresi, Farzaneh, Van der Brug, Marcel P, Nalls, Michael A, Cookson, Mark R, St-Laurent, Georges, Wahlestedt, Claes
Published in Genome biology (27.05.2010)
Published in Genome biology (27.05.2010)
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Genome-wide antisense transcription drives mRNA processing in bacteria
Lasa, Iñigo, Toledo-Arana, Alejandro, Dobin, Alexander, Villanueva, Maite, de los Mozos, Igor Ruiz, Vergara-Irigaray, Marta, Segura, Víctor, Fagegaltier, Delphine, Penadés, José R, Valle, Jaione, Solano, Cristina, Gingeras, Thomas R
Published in Proceedings of the National Academy of Sciences - PNAS (13.12.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (13.12.2011)
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A vast pool of lineage-specific microproteins encoded by long non-coding RNAs in plants
Fesenko, Igor, Shabalina, Svetlana A, Mamaeva, Anna, Knyazev, Andrey, Glushkevich, Anna, Lyapina, Irina, Ziganshin, Rustam, Kovalchuk, Sergey, Kharlampieva, Daria, Lazarev, Vassili, Taliansky, Michael, Koonin, Eugene V
Published in Nucleic acids research (11.10.2021)
Published in Nucleic acids research (11.10.2021)
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