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On the Utility of Pooling Biological Samples in Microarray Experiments
Kendziorski, C., Irizarry, R. A., K.-S. Chen, Haag, J. D., Gould, M. N., Wahba, Grace
Published in Proceedings of the National Academy of Sciences - PNAS (22.03.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (22.03.2005)
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Gene Expression Profiles during In Vivo Human Rhinovirus Infection: Insights into the Host Response
Proud, David, Turner, Ronald B, Winther, Birgit, Wiehler, Shahina, Tiesman, Jay P, Reichling, Tim D, Juhlin, Kenton D, Fulmer, Andy W, Ho, Begonia Y, Walanski, Amy A, Poore, Cathy L, Mizoguchi, Haruko, Jump, Lynn, Moore, Marsha L, Zukowski, Claudine K, Clymer, Jeffrey W
Published in American journal of respiratory and critical care medicine (01.11.2008)
Published in American journal of respiratory and critical care medicine (01.11.2008)
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Gene expression profiling with principal component analysis depicts the biological continuum from essential thrombocythemia over polycythemia vera to myelofibrosis
Skov, Vibe, Thomassen, Mads, Riley, Caroline H., Jensen, Morten K., Bjerrum, Ole Weis, Kruse, Torben A., Hasselbalch, Hans Carl, Larsen, Thomas Stauffer
Published in Experimental hematology (01.09.2012)
Published in Experimental hematology (01.09.2012)
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Statistical implications of pooling RNA samples for microarray experiments
Peng, Xuejun, Wood, Constance L, Blalock, Eric M, Chen, Kuey Chu, Landfield, Philip W, Stromberg, Arnold J
Published in BMC bioinformatics (24.06.2003)
Published in BMC bioinformatics (24.06.2003)
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Comparative evaluation of gene-set analysis methods
Liu, Qi, Dinu, Irina, Adewale, Adeniyi J, Potter, John D, Yasui, Yutaka
Published in BMC bioinformatics (07.11.2007)
Published in BMC bioinformatics (07.11.2007)
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Single subject transcriptome analysis to identify functionally signed gene set or pathway activity
Berghout, Joanne, Li, Qike, Pouladi, Nima, Li, Jianrong, Lussier, Yves A.
Published in Biocomputing 2018 (01.01.2018)
Published in Biocomputing 2018 (01.01.2018)
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Whole blood and leukocyte RNA isolation for gene expression analyses
Feezor, Robert J, Baker, Henry V, Mindrinos, Michael, Hayden, Doug, Tannahill, Cynthia L, Brownstein, Bernard H, Fay, Adrian, MacMillan, Sandra, Laramie, Jason, Xiao, Wenzhong, Moldawer, Lyle L, Cobb, J. Perren, Laudanski, Krzysztof, Miller-Graziano, Carol L, Maier, Ronald V, Schoenfeld, David, Davis, Ronald W, Tompkins, Ronald G, Inflammation and Host Response to Injury, Large-Scale Collaborative Research Program
Published in Physiological genomics (17.11.2004)
Published in Physiological genomics (17.11.2004)
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Microarray analysis identifies an aberrant expression of apoptosis and DNA damage-regulatory genes in multiple sclerosis
Satoh, Jun-ichi, Nakanishi, Megumi, Koike, Fumiko, Miyake, Sachiko, Yamamoto, Toshiyuki, Kawai, Mitsuru, Kikuchi, Seiji, Nomura, Kyouichi, Yokoyama, Kazumasa, Ota, Kohei, Kanda, Takashi, Fukazawa, Toshiyuki, Yamamura, Takashi
Published in Neurobiology of disease (01.04.2005)
Published in Neurobiology of disease (01.04.2005)
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Characterization of Variability in Large-Scale Gene Expression Data: Implications for Study Design
Novak, Jaroslav P., Sladek, Robert, Hudson, Thomas J.
Published in Genomics (San Diego, Calif.) (01.01.2002)
Published in Genomics (San Diego, Calif.) (01.01.2002)
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Comparison of different normalization assumptions for analyses of DNA methylation data from the cancer genome
Wang, Dong, Zhang, Yuannv, Huang, Yan, Li, Pengfei, Wang, Mingyue, Wu, Ruihong, Cheng, Lixin, Zhang, Wenjing, Zhang, Yujing, Li, Bin, Wang, Chenguang, Guo, Zheng
Published in Gene (10.09.2012)
Published in Gene (10.09.2012)
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Improved analytical methods for microarray-based genome-composition analysis
Kim, Charles C, Joyce, Elizabeth A, Chan, Kaman, Falkow, Stanley
Published in Genome biology (29.10.2002)
Published in Genome biology (29.10.2002)
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Evaluating Statistical Methods Using Plasmode Data Sets in the Age of Massive Public Databases: An Illustration Using False Discovery Rates
Gadbury, Gary L., Xiang, Qinfang, Yang, Lin, Barnes, Stephen, Page, Grier P., Allison, David B.
Published in PLoS genetics (01.06.2008)
Published in PLoS genetics (01.06.2008)
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Sources of variability and effect of experimental approach on expression profiling data interpretation
Bakay, Marina, Chen, Yi-Wen, Borup, Rehannah, Zhao, Po, Nagaraju, Kanneboyina, Hoffman, Eric P
Published in BMC bioinformatics (31.01.2002)
Published in BMC bioinformatics (31.01.2002)
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