MutMap accelerates breeding of a salt-tolerant rice cultivar
Takagi, Hiroki, Tamiru, Muluneh, Abe, Akira, Yoshida, Kentaro, Uemura, Aiko, Yaegashi, Hiroki, Obara, Tsutomu, Oikawa, Kaori, Utsushi, Hiroe, Kanzaki, Eiko, Mitsuoka, Chikako, Natsume, Satoshi, Kosugi, Shunichi, Kanzaki, Hiroyuki, Matsumura, Hideo, Urasaki, Naoya, Kamoun, Sophien, Terauchi, Ryohei
Published in Nature biotechnology (01.05.2015)
Published in Nature biotechnology (01.05.2015)
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Journal Article
Impact of rice GENERAL REGULATORY FACTOR14h (GF14h) on low-temperature seed germination and its application to breeding
Sugimura, Yusaku, Oikawa, Kaori, Sugihara, Yu, Utsushi, Hiroe, Kanzaki, Eiko, Ito, Kazue, Ogasawara, Yumiko, Fujioka, Tomoaki, Takagi, Hiroki, Shimizu, Motoki, Shimono, Hiroyuki, Terauchi, Ryohei, Abe, Akira
Published in PLoS genetics (07.08.2024)
Published in PLoS genetics (07.08.2024)
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Journal Article
A genetically linked pair of NLR immune receptors shows contrasting patterns of evolution
Shimizu, Motoki, Hirabuchi, Akiko, Sugihara, Yu, Abe, Akira, Takeda, Takumi, Kobayashi, Michie, Hiraka, Yukie, Kanzaki, Eiko, Oikawa, Kaori, Saitoh, Hiromasa, Langner, Thorsten, Banfield, Mark J., Kamoun, Sophien, Terauchi, Ryohei
Published in Proceedings of the National Academy of Sciences - PNAS (05.07.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (05.07.2022)
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Journal Article
Latitudinal adaptation and dispersal pathway of foxtail millet suggested by geographical distribution of transposable elements inserted in the SiPRR37 gene
Fukunaga, Kenji, Abe, Akira, Ito, Kazue, Oikawa, Kaori, Tsuji, Masaya, Kawase, Makoto
Published in Genes & Genetic Systems (01.01.2024)
Published in Genes & Genetic Systems (01.01.2024)
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Journal Article
Latitudinal adaptation and dispersal pathway suggested by geographical distribution of transposable elements inserted in the SiPRR37 gene in foxtail millet
Fukunaga, Kenji, Abe, Akira, Ito, Kazue, Oikawa, Kaori, Tsuji, Masaya, Kawase, Makoto
Published in Genes & Genetic Systems (2024)
Published in Genes & Genetic Systems (2024)
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Journal Article
V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data
Natsume, Satoshi, Oikawa, Kaori, Nomura, Chihiro, Ito, Kazue, Utsushi, Hiroe, Shimizu, Motoki, Terauchi, Ryohei, Abe, Akira
Published in Breeding Science (01.01.2023)
Published in Breeding Science (01.01.2023)
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Journal Article
Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
Tamiru, Muluneh, Natsume, Satoshi, Takagi, Hiroki, White, Benjamen, Yaegashi, Hiroki, Shimizu, Motoki, Yoshida, Kentaro, Uemura, Aiko, Oikawa, Kaori, Abe, Akira, Urasaki, Naoya, Matsumura, Hideo, Babil, Pachakkil, Yamanaka, Shinsuke, Matsumoto, Ryo, Muranaka, Satoru, Girma, Gezahegn, Lopez-Montes, Antonio, Gedil, Melaku, Bhattacharjee, Ranjana, Abberton, Michael, Kumar, P Lava, Rabbi, Ismail, Tsujimura, Mai, Terachi, Toru, Haerty, Wilfried, Corpas, Manuel, Kamoun, Sophien, Kahl, Günter, Takagi, Hiroko, Asiedu, Robert, Terauchi, Ryohei
Published in BMC biology (19.09.2017)
Published in BMC biology (19.09.2017)
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Journal Article
A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice
Tamiru, Muluneh, Takagi, Hiroki, Abe, Akira, Yokota, Takao, Kanzaki, Hiroyuki, Okamoto, Haruko, Saitoh, Hiromasa, Takahashi, Hideyuki, Fujisaki, Koki, Oikawa, Kaori, Uemura, Aiko, Natsume, Satoshi, Jikumaru, Yusuke, Matsuura, Hideyuki, Umemura, Kenji, Terry, Matthew J., Terauchi, Ryohei
Published in The New phytologist (01.06.2016)
Published in The New phytologist (01.06.2016)
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Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits
Segawa, Tenta, Nishiyama, Chisato, Tamiru-Oli, Muluneh, Sugihara, Yu, Abe, Akira, Sone, Hinako, Itoh, Noriaki, Asukai, Mayu, Uemura, Aiko, Oikawa, Kaori, Utsushi, Hiroe, Ikegami-Katayama, Ayako, Imamura, Tomohiro, Mori, Masashi, Terauchi, Ryohei, Takagi, Hiroki
Published in Breeding Science (01.01.2021)
Published in Breeding Science (01.01.2021)
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Journal Article
Body balance function of cochlear implant patients with and without sound conditions
Oikawa, Kaori, Kobayashi, Yumiko, Hiraumi, Harukazu, Yonemoto, Kiyoshi, Sato, Hiroaki
Published in Clinical neurophysiology (01.10.2018)
Published in Clinical neurophysiology (01.10.2018)
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Journal Article
A genetically linked pair of NLR immune receptors show contrasting patterns of evolution
Shimizu, Motoki, Hirabuchi, Akiko, Sugihara, Yu, Abe, Akira, Takeda, Takumi, Kobayashi, Michie, Hiraka, Yukie, Kanzaki, Eiko, Oikawa, Kaori, Saitoh, Hiromasa, Langner, Thorsten, Banfield, Mark J, Kamoun, Sophien, Terauchi, Ryohei
Published in bioRxiv (18.02.2022)
Published in bioRxiv (18.02.2022)
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Paper
Impact of rice GENERAL REGULATORY FACTOR14h
Sugimura, Yusaku, Oikawa, Kaori, Sugihara, Yu, Utsushi, Hiroe, Kanzaki, Eiko, Ito, Kazue, Ogasawara, Yumiko, Fujioka, Tomoaki, Takagi, Hiroki, Shimizu, Motoki, Shimono, Hiroyuki, Terauchi, Ryohei, Abe, Akira
Published in PLoS genetics (07.08.2024)
Published in PLoS genetics (07.08.2024)
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Journal Article
Next-generation sequencing-based bulked segregant analysis for QTL mapping in the heterozygous species Brassica rapa
Itoh, Noriaki, Segawa, Tenta, Tamiru, Muluneh, Abe, Akira, Sakamoto, Shota, Uemura, Aiko, Oikawa, Kaori, Kutsuzawa, Hiroto, Koga, Hironori, Imamura, Tomohiro, Terauchi, Ryohei, Takagi, Hiroki
Published in Theoretical and applied genetics (01.10.2019)
Published in Theoretical and applied genetics (01.10.2019)
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Journal Article
V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data
Natsume, Satoshi, Oikawa, Kaori, Nomura, Chihiro, Ito, Kazue, Utsushi, Hiroe, Shimizu, Motoki, Terauchi, Ryohei, Abe, Akira
Published in Breeding Science (2023)
Published in Breeding Science (2023)
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Journal Article
Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)
Sugihara, Yu, Darkwa, Kwabena, Yaegashi, Hiroki, Natsume, Satoshi, Shimizu, Motoki, Abe, Akira, Hirabuchi, Akiko, Ito, Kazue, Oikawa, Kaori, Tamiru-Oli, Muluneh, Ohta, Atsushi, Matsumoto, Ryo, Agre, Paterne, De Koeyer, David, Pachakkil, Babil, Yamanaka, Shinsuke, Muranaka, Satoru, Takagi, Hiroko, White, Ben, Asiedu, Robert, Innan, Hideki, Asfaw, Asrat, Adebola, Patrick, Terauchi, Ryohei
Published in Proceedings of the National Academy of Sciences - PNAS (15.12.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (15.12.2020)
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Journal Article
Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector
Yu Sugihara, Yoshiko Abe, Hiroki Takagi, Akira Abe, Motoki Shimizu, Kazue Ito, Eiko Kanzaki, Kaori Oikawa, Jiorgos Kourelis, Thorsten Langner, Joe Win, Aleksandra Białas, Daniel Lüdke, Mauricio P Contreras, Izumi Chuma, Hiromasa Saitoh, Michie Kobayashi, Shuan Zheng, Yukio Tosa, Mark J Banfield, Sophien Kamoun, Ryohei Terauchi, Koki Fujisaki
Published in PLoS biology (01.01.2023)
Published in PLoS biology (01.01.2023)
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Journal Article
Genome Analysis Revives a Forgotten Hybrid Crop Edo-dokoro in the Genus Dioscorea
Natsume, Satoshi, Sugihara, Yu, Kudoh, Aoi, Oikawa, Kaori, Shimizu, Motoki, Ishikawa, Yuko, Nishihara, Masahiro, Abe, Akira, Innan, Hideki, Terauchi, Ryohei
Published in Plant and cell physiology (01.11.2022)
Published in Plant and cell physiology (01.11.2022)
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Journal Article
Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector
Sugihara, Yu, Abe, Yoshiko, Takagi, Hiroki, Abe, Akira, Shimizu, Motoki, Ito, Kazue, Kanzaki, Eiko, Oikawa, Kaori, Kourelis, Jiorgos, Langner, Thorsten, Win, Joe, Białas, Aleksandra, Lüdke, Daniel, Contreras, Mauricio P, Chuma, Izumi, Saitoh, Hiromasa, Kobayashi, Michie, Zheng, Shuan, Tosa, Yukio, Banfield, Mark J, Kamoun, Sophien, Terauchi, Ryohei, Fujisaki, Koki
Published in PLoS biology (01.01.2023)
Published in PLoS biology (01.01.2023)
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Journal Article
Rice blast resistance gene Pii is controlled by a pair of NBS-LRR genes Pii-1 and Pii-2
Takagi, Hiroki, Abe, Akira, Uemura, Aiko, Oikawa, Kaori, Utsushi, Hiroe, Yaegashi, Hiroki, Kikuchi, Hideko, Shimizu, Motoki, Abe, Yoshiko, Kanzaki, Hiroyuki, Saitoh, Hiromasa, Terauchi, Ryohei, Fujisaki, Koki
Published in bioRxiv (30.11.2017)
Published in bioRxiv (30.11.2017)
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Paper
Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits
Segawa, Tenta, Nishiyama, Chisato, Tamiru-Oli, Muluneh, Sugihara, Yu, Abe, Akira, Sone, Hinako, Itoh, Noriaki, Asukai, Mayu, Uemura, Aiko, Oikawa, Kaori, Utsushi, Hiroe, Ikegami-Katayama, Ayako, Imamura, Tomohiro, Mori, Masashi, Terauchi, Ryohei, Takagi, Hiroki
Published in Breeding Science (2021)
Published in Breeding Science (2021)
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Journal Article