Antimicrobial-Resistant Bacterial Diarrhea in Rural Western Kenya
Shapiro, Roger L., Kumar, Lata, Phillips-Howard, Penny, Wells, Joy G., Adcock, Penny, Brooks, John, Ackers, Marta-Louise, Ochieng, John Benjamin, Mintz, Eric, Wahlquist, Susanne, Waiyaki, Peter, Slutsker, Laurence
Published in The Journal of infectious diseases (01.06.2001)
Published in The Journal of infectious diseases (01.06.2001)
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Multi-drug resistant non-typhoidal Salmonella associated with invasive disease in western Kenya
Akullian, Adam, Montgomery, Joel M, John-Stewart, Grace, Miller, Samuel I, Hayden, Hillary S, Radey, Matthew C, Hager, Kyle R, Verani, Jennifer R, Ochieng, John Benjamin, Juma, Jane, Katieno, Jim, Fields, Barry, Bigogo, Godfrey, Audi, Allan, Walson, Judd
Published in PLoS neglected tropical diseases (01.01.2018)
Published in PLoS neglected tropical diseases (01.01.2018)
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Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies
Donnenberg, Michael S, Hazen, Tracy H, Farag, Tamer H, Panchalingam, Sandra, Antonio, Martin, Hossain, Anowar, Mandomando, Inacio, Ochieng, John Benjamin, Ramamurthy, Thandavarayan, Tamboura, Boubou, Zaidi, Anita, Levine, Myron M, Kotloff, Karen, Rasko, David A, Nataro, James P
Published in PLoS neglected tropical diseases (01.05.2015)
Published in PLoS neglected tropical diseases (01.05.2015)
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Surveillance for Bacterial Diarrhea and Antimicrobial Resistance in Rural Western Kenya, 1997–2003
Brooks, John T., Ochieng, John Benjamin, Kumar, Lata, Okoth, George, Shapiro, Roger L., Wells, Joy G., Bird, Michele, Bopp, Cheryl, Chege, Wairimu, Beatty, Mark E., Chiller, Tom, Vulule, John M., Mintz, Eric, Slutsker, Laurence
Published in Clinical infectious diseases (15.08.2006)
Published in Clinical infectious diseases (15.08.2006)
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Evaluation of Molecular Serotyping Assays for Shigella flexneri Directly on Stool Samples
Liu, Jie, Pholwat, Suporn, Zhang, Jixian, Taniuchi, Mami, Haque, Rashidul, Alam, Masud, Ochieng, John Benjamin, Jones, Jennifer A, Platts-Mills, James A, Tennant, Sharon M, Houpt, Eric
Published in Journal of clinical microbiology (21.01.2021)
Published in Journal of clinical microbiology (21.01.2021)
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Clinical severity of enteric viruses detected using a quantitative molecular assay compared to conventional assays in the Global Enteric Multicenter Study
Cates, Jordan, Powell, Helen, Platts-Mills, James, Nasrin, Dilruba, Panchalingam, Sandra, Sow, Samba O, Traore, Awa, Sur, Dipika, Ramamurthy, Thandavarayan, Zaidi, Anita K M, Kabir, Furqan, Faruque, Abu S G, Ahmed, Dilruba, Breiman, Robert F, Omore, Richard, Ochieng, John Benjamin, Hossain, M Jahangir, Antonio, Martin, Mandomando, Inácio, Vubil, Delfino, Nataro, James P, Levine, Myron M, Parashar, Umesh D, Kotloff, Karen L, Tate, Jacqueline E
Published in The Journal of infectious diseases (18.04.2024)
Published in The Journal of infectious diseases (18.04.2024)
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Shigella in Africa: New Insights From the Vaccine Impact on Diarrhea in Africa (VIDA) Study
Kasumba, Irene N, Badji, Henry, Powell, Helen, Hossain, M Jahangir, Omore, Richard, Sow, Samba O, Verani, Jennifer R, Platts-Mills, James A, Widdowson, Marc-Alain, Zaman, Syed M A, Jones, Jennifer, Sen, Sunil, Permala-Booth, Jasnehta, Nasrin, Shamima, Roose, Anna, Nasrin, Dilruba, Ochieng, John Benjamin, Juma, Jane, Doh, Sanogo, Jones, Joquina Chiquita M, Antonio, Martin, Awuor, Alex O, Sugerman, Ciara E, Watson, Nora, Focht, Christopher, Liu, Jie, Houpt, Eric, Kotloff, Karen L, Tennant, Sharon M
Published in Clinical infectious diseases (19.04.2023)
Published in Clinical infectious diseases (19.04.2023)
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Defining the phylogenomics of Shigella species: a pathway to diagnostics
Sahl, Jason W, Morris, Carolyn R, Emberger, Jennifer, Fraser, Claire M, Ochieng, John Benjamin, Juma, Jane, Fields, Barry, Breiman, Robert F, Gilmour, Matthew, Nataro, James P, Rasko, David A
Published in Journal of clinical microbiology (01.03.2015)
Published in Journal of clinical microbiology (01.03.2015)
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Prevalence of Salmonella in Stool During the Vaccine Impact on Diarrhea in Africa (VIDA) Study, 2015–2018
Kasumba, Irene N, Powell, Helen, Omore, Richard, Hossain, M Jahangir, Sow, Samba O, Ochieng, John Benjamin, Badji, Henry, Verani, Jennifer R, Widdowson, Marc-Alain, Sen, Sunil, Nasrin, Shamima, Permala-Booth, Jasnehta, Jones, Jennifer A, Roose, Anna, Nasrin, Dilruba, Sugerman, Ciara E, Juma, Jane, Awuor, Alex, Jones, Joquina Chiquita M, Doh, Sanogo, Okoi, Catherine, Zaman, Syed M A, Antonio, Martin, Hunsperger, Elizabeth, Onyango, Clayton, Platts-Mills, James, Liu, Jie, Houpt, Eric, Neuzil, Kathleen M, Kotloff, Karen L, Tennant, Sharon M
Published in Clinical infectious diseases (19.04.2023)
Published in Clinical infectious diseases (19.04.2023)
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Diarrhea Case Surveillance in the Enterics for Global Health Shigella Surveillance Study: Epidemiologic Methods
Atlas, Hannah E, Conteh, Bakary, Islam, Md Taufiqul, Jere, Khuzwayo C, Omore, Richard, Sanogo, Doh, Schiaffino, Francesca, Yousafzai, Mohammad Tahir, Ahmed, Naveed, Awuor, Alex O, Badji, Henry, Cornick, Jennifer, Feutz, Erika, Galagan, Sean R, Haidara, Fadima C, Horne, Bri’Anna, Hossen, Md Ismail, Hotwani, Aneeta, Houpt, Eric R, Jallow, Abdoulie F, Karim, Mehrab, Keita, Adama Mamby, Keita, Youssouf, Khanam, Farhana, Liu, Jie, Malemia, Thandizo, Manneh, Alhagie, McGrath, Christine J, Nasrin, Dilruba, Ndalama, Maureen, Ochieng, John Benjamin, Ogwel, Billy, Paredes Olortegui, Maribel, Zegarra Paredes, Loyda Fiorella, Pinedo Vasquez, Tackeshy, Platts-Mills, James A, Qudrat-E-Khuda, Syed, Qureshi, Sonia, Hasan Rajib, Md Nazmul, Rogawski McQuade, Elizabeth T, Sultana, Shazia, Tennant, Sharon M, Tickell, Kirkby D, Witte, Desiree, Peñataro Yori, Pablo, Cunliffe, Nigel A, Hossain, M Jahangir, Kosek, Margaret N, Kotloff, Karen L, Qadri, Firdausi, Qamar, Farah Naz, Tapia, Milagritos D, Pavlinac, Patricia B
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Microbiological Methods Used in the Enterics for Global Health Shigella Surveillance Study
Horne, Bri’Anna, Badji, Henry, Bhuiyan, Md Taufiqur Rahman, Romaina Cachique, Lucero, Cornick, Jennifer, Hotwani, Aneeta, Juma, Jane, Ochieng, John Benjamin, Abdou, Mahamadou, Apondi, Evans, Atlas, Hannah E, Awuor, Alex O, Baker, Kate S, Ceesay, Bubacarr E, Charles, Mary, Cunliffe, Nigel A, Feutz, Erika, Galagan, Sean R, Guindo, Ibrehima, Hossain, M Jahangir, Iqbal, Junaid, Jallow, Fatima, Keita, Noumou Yakhouba, Khanam, Farhana, Kotloff, Karen L, Maiden, Victor, Manzanares Villanueva, Katia, Mito, Oscar, Mosharraf, Md Parvej, Nkeze, Joseph, Ikumapayi, Usman N, Paredes Olortegui, Maribel, Pavlinac, Patricia B, Pinedo Vasquez, Tackeshy, Qadri, Firdausi, Qamar, Farah Naz, Qureshi, Sonia, Rahman, Nazia, Sangare, Aminata, Sen, Sunil, Peñataro Yori, Pablo, Yousafzai, Mohammad Tahir, Ahmed, Dilruba, Jere, Khuzwayo C, Kosek, Margaret N, Omore, Richard, Permala-Booth, Jasnehta, Secka, Ousman, Tennant, Sharon M
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Shigella Detection and Molecular Serotyping With a Customized TaqMan Array Card in the Enterics for Global Health (EFGH): Shigella Surveillance Study
Liu, Jie, Garcia Bardales, Paul F, Islam, Kamrul, Jarju, Sheikh, Juma, Jane, Mhango, Chimwemwe, Naumanga, Queen, Qureshi, Sonia, Sonye, Catherine, Ahmed, Naveed, Aziz, Fatima, Bhuiyan, Md Taufiqur Rahman, Charles, Mary, Cunliffe, Nigel A, Abdou, Mahamadou, Galagan, Sean R, Gitteh, Ensa, Guindo, Ibrehima, Jahangir Hossain, M, Jabang, Abdoulie M J, Jere, Khuzwayo C, Kawonga, Flywell, Keita, Mariama, Keita, Noumou Yakhouba, Kotloff, Karen L, Shapiama Lopez, Wagner V, Munga, Stephen, Paredes Olortegui, Maribel, Omore, Richard, Pavlinac, Patricia B, Qadri, Firdausi, Qamar, Farah Naz, Azadul Alam Raz, S M, Riziki, Laura, Schiaffino, Francesca, Stroup, Suzanne, Traore, Sarata Nassoun, Pinedo Vasquez, Tackeshy, Yousafzai, Mohammad Tahir, Antonio, Martin, Cornick, Jennifer E, Kabir, Furqan, Khanam, Farhana, Kosek, Margaret N, Ochieng, John Benjamin, Platts-Mills, James A, Tennant, Sharon M, Houpt, Eric R
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Evaluation of Fecal Inflammatory Biomarkers to Identify Bacterial Diarrhea Episodes: Systematic Review and Protocol for the Enterics for Global Health Shigella Surveillance Study
Babb, Courtney, Badji, Henry, Bhuiyan, Md Taufiqur Rahman, Cornick, Jennifer, Qureshi, Sonia, Sonye, Catherine, Shapiama Lopez, Wagner V, Adnan, Mehreen, Atlas, Hannah E, Begum, Kehkashan, Brennhofer, Stephanie A, Ceesay, Bubacarr E, Ceesay, Abdoulie K, Cunliffe, Nigel A, Garcia Bardales, Paul F, Haque, Shahinur, Horne, Bri’Anna, Hossain, M Jahangir, Iqbal, Junaid, Islam, Md Taufiqul, Islam, Sadia, Khanam, Farhana, Kotloff, Karen L, Malemia, Thandizo, Manzanares Villanueva, Katia, Million, Gertrude Malola, Munthali, Vitumbiko, Ochieng, John Benjamin, Ogwel, Billy, Paredes Olortegui, Maribel, Omore, Richard, Pavlinac, Patricia B, Platts-Mills, James A, Sears, Khandra T, Secka, Ousman, Tennant, Sharon M, Peñataro Yori, Pablo, Yousafzai, Mohammad Tahir, Jere, Khuzwayo C, Kosek, Margaret N, Munga, Stephen, Ikumapayi, Usman N, Qadri, Firdausi, Qamar, Farah Naz, Rogawski McQuade, Elizabeth T
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Quantifying the Cost of Shigella Diarrhea in the Enterics for Global Health (EFGH) Shigella Surveillance Study
Morozoff, Chloe, Ahmed, Naveed, Chinkhumba, Jobiba, Islam, Md Taufiqul, Jallow, Abdoulie F, Ogwel, Billy, Zegarra Paredes, Loyda Fiorella, Sanogo, Doh, Atlas, Hannah E, Badji, Henry, Bar-Zeev, Naor, Conteh, Bakary, Güimack Fajardo, Mario, Feutz, Erika, Haidara, Fadima C, Karim, Mehrab, Mamby Keita, Adama, Keita, Youssouf, Khanam, Farhana, Kosek, Margaret N, Kotloff, Karen L, Maguire, Rebecca, Mbutuka, Ishmail S, Ndalama, Maureen, Ochieng, John Benjamin, Okello, Collins, Omore, Richard, Perez Garcia, Karin F, Qamar, Farah Naz, Qudrat-E-Khuda, Syed, Qureshi, Sonia, Rajib, Md Nazmul Hasan, Shapiama Lopez, Wagner Valentino, Sultana, Shazia, Witte, Desiree, Yousafzai, Mohammad Tahir, Awuor, Alex O, Cunliffe, Nigel A, Jahangir Hossain, M, Paredes Olortegui, Maribel, Tapia, Milagritos D, Zaman, K, Means, Arianna Rubin
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Data Management in Multicountry Consortium Studies: The Enterics For Global Health (EFGH) Shigella Surveillance Study Example
Feutz, Erika, Biswas, Prasanta K, Ndeketa, Latif, Ogwel, Billy, Onwuchekwa, Uma, Sarwar, Golam, Sultana, Shazia, Peñataro Yori, Pablo, Acebedo, Alyssa, Ahmed, Naveed, Ahmed, Imran, Atlas, Hannah E, Awuor, Alex O, Bhuiyan, Md Amirul Islam, Conteh, Bakary, Diawara, Oualy, Elwood, Sarah, Fane, Moussa, Hossen, Md Ismail, Ireen, Mahzabeen, Jallow, Abdoulie F, Karim, Mehrab, Kosek, Margaret N, Kotloff, Karen L, Lefu, Clement, Liu, Jie, Maguire, Rebecca, Qamar, Farah Naz, Ndalama, Maureen, Ochieng, John Benjamin, Okonji, Caleb, Paredes, Loyda Fiorella Zegarra, Pavlinac, Patricia B, Perez, Karin, Qureshi, Sonia, Schiaffino, Francesca, Traore, Moussa, Tickell, Kirkby D, Wachepa, Richard, Witte, Desiree, Cornick, Jennifer, Jahangir Hossain, M, Khanam, Farhana, Olortegui, Maribel Paredes, Omore, Richard, Sow, Samba O, Yousafzai, Mohammad Tahir, Galagan, Sean R
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Exploring Natural Immune Responses to Shigella Exposure Using Multiplex Bead Assays on Dried Blood Spots in High-Burden Countries: Protocol From a Multisite Diarrhea Surveillance Study
Benedicto-Matambo, Prisca, Avolio, Lindsay N, Badji, Henry, Batool, Rabab, Khanam, Farhana, Munga, Stephen, Tapia, Milagritos D, Peñataro Yori, Pablo, Awuor, Alex O, Ceesay, Bubacarr E, Cornick, Jennifer, Cunliffe, Nigel A, Garcia Bardales, Paul F, Heaney, Christopher D, Hotwani, Aneeta, Ireen, Mahzabeen, Taufiqul Islam, Md, Jallow, Ousman, Kaminski, Robert W, Shapiama Lopez, Wagner V, Maiden, Victor, Ikumapayi, Usman Nurudeen, Nyirenda, Ruth, Ochieng, John Benjamin, Omore, Richard, Paredes Olortegui, Maribel, Pavlinac, Patricia B, Pisanic, Nora, Qadri, Firdausi, Qureshi, Sonia, Rahman, Nazia, Rogawski McQuade, Elizabeth T, Schiaffino, Francesca, Secka, Ousman, Sonye, Catherine, Sultana, Shazia, Timite, Drissa, Traore, Awa, Yousafzai, Mohammad Tahir, Taufiqur Rahman Bhuiyan, Md, Jahangir Hossain, M, Jere, Khuzwayo C, Kosek, Margaret N, Kotloff, Karen L, Qamar, Farah Naz, Sow, Samba O, Platts-Mills, James A
Published in Open forum infectious diseases (25.03.2024)
Published in Open forum infectious diseases (25.03.2024)
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Genomic diversity of EPEC associated with clinical presentations of differing severity
Hazen, Tracy H, Donnenberg, Michael S, Panchalingam, Sandra, Antonio, Martin, Hossain, Anowar, Mandomando, Inacio, Ochieng, John Benjamin, Ramamurthy, Thandavarayan, Tamboura, Boubou, Qureshi, Shahida, Quadri, Farheen, Zaidi, Anita, Kotloff, Karen L, Levine, Myron M, Barry, Eileen M, Kaper, James B, Rasko, David A, Nataro, James P
Published in Nature microbiology (18.01.2016)
Published in Nature microbiology (18.01.2016)
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Bacterial Factors Associated with Lethal Outcome of Enteropathogenic Escherichia coli Infection: Genomic Case-Control Studies: e0003791
Donnenberg, Michael S, Hazen, Tracy H, Farag, Tamer H, Panchalingam, Sandra, Antonio, Martin, Hossain, Anowar, Mandomando, Inacio, Ochieng, John Benjamin, Ramamurthy, Thandavarayan, Tamboura, Boubou, Zaidi, Anita, Levine, Myron M, Kotloff, Karen, Rasko, David A, Nataro, James P
Published in PLoS neglected tropical diseases (01.05.2015)
Published in PLoS neglected tropical diseases (01.05.2015)
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Journal Article
Draft Genome Sequences of Nine Enteropathogenic Escherichia coli Strains from Kenya
Hazen, Tracy H, Humphrys, Michael S, Ochieng, John Benjamin, Parsons, Michele, Bopp, Cheryl A, O'Reilly, Ciara E, Mintz, Eric, Rasko, David A
Published in Genome announcements (Washington, DC) (12.06.2014)
Published in Genome announcements (Washington, DC) (12.06.2014)
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Journal Article
Transmission of epidemic Vibrio cholerae O1 in rural western Kenya associated with drinking water from Lake Victoria: an environmental reservoir for cholera?
Shapiro, RL, Otieno, MR, Adcock, PM, Phillips-Howard, PA, Hawley, WA, Kumar, L, Waiyaki, P, Nahlen, BL, Slutsker, L
Published in The American journal of tropical medicine and hygiene (01.02.1999)
Published in The American journal of tropical medicine and hygiene (01.02.1999)
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