Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection
Charalampous, Themoula, Kay, Gemma L, Richardson, Hollian, Aydin, Alp, Baldan, Rossella, Jeanes, Christopher, Rae, Duncan, Grundy, Sara, Turner, Daniel J, Wain, John, Leggett, Richard M, Livermore, David M, O'Grady, Justin
Published in Nature biotechnology (01.07.2019)
Published in Nature biotechnology (01.07.2019)
Get full text
Journal Article
Co-infections: potentially lethal and unexplored in COVID-19
Cox, Michael J, Loman, Nicholas, Bogaert, Debby, O'Grady, Justin
Published in The Lancet Microbe (01.05.2020)
Published in The Lancet Microbe (01.05.2020)
Get full text
Journal Article
Web Resource
MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
Ashton, Philip M, Nair, Satheesh, Dallman, Tim, Rubino, Salvatore, Rabsch, Wolfgang, Mwaigwisya, Solomon, Wain, John, O'Grady, Justin
Published in Nature biotechnology (01.03.2015)
Published in Nature biotechnology (01.03.2015)
Get full text
Journal Article
Diagnosing tuberculosis in the 21st century – Dawn of a genomics revolution?
Jeanes, Christopher, O’Grady, Justin
Published in International journal of mycobacteriology (01.12.2016)
Published in International journal of mycobacteriology (01.12.2016)
Get full text
Journal Article
Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopedic Device Infection
Street, Teresa L, Sanderson, Nicholas D, Kolenda, Camille, Kavanagh, James, Pickford, Hayleah, Hoosdally, Sarah, Cregan, Jack, Taunt, Carol, Jones, Emma, Oakley, Sarah, Atkins, Bridget L, Dudareva, Maria, McNally, Martin A, O'Grady, Justin, Crook, Derrick W, Eyre, David W
Published in Journal of clinical microbiology (20.04.2022)
Published in Journal of clinical microbiology (20.04.2022)
Get full text
Journal Article
An optimised protocol for detection of SARS-CoV-2 in stool
Li, Tianqi, Garcia-Gutierrez, Enriqueta, Yara, Daniel A, Scadden, Jacob, Davies, Jade, Hutchins, Chloe, Aydin, Alp, O'Grady, Justin, Narbad, Arjan, Romano, Stefano, Sayavedra, Lizbeth
Published in BMC microbiology (06.09.2021)
Published in BMC microbiology (06.09.2021)
Get full text
Journal Article
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs
Phelan, Jody, O'Sullivan, Denise M, Machado, Diana, Ramos, Jorge, Whale, Alexandra S, O'Grady, Justin, Dheda, Keertan, Campino, Susana, McNerney, Ruth, Viveiros, Miguel, Huggett, Jim F, Clark, Taane G
Published in Genome medicine (22.12.2016)
Published in Genome medicine (22.12.2016)
Get full text
Journal Article
Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples
Street, Teresa L, Barker, Leanne, Sanderson, Nicholas D, Kavanagh, James, Hoosdally, Sarah, Cole, Kevin, Newnham, Robert, Selvaratnam, Mathyruban, Andersson, Monique, Llewelyn, Martin J, O'Grady, Justin, Crook, Derrick W, Eyre, David W
Published in Journal of clinical microbiology (24.02.2020)
Published in Journal of clinical microbiology (24.02.2020)
Get full text
Journal Article
Rapid and Point-of-Care Testing in Respiratory Tract Infections: An Antibiotic Guardian?
Dhesi, Zaneeta, Enne, Virve I, O'Grady, Justin, Gant, Vanya, Livermore, David M
Published in ACS Pharmacology & Translational Science (12.06.2020)
Published in ACS Pharmacology & Translational Science (12.06.2020)
Get full text
Journal Article
Web Resource
Emerging commercial molecular tests for the diagnosis of bloodstream infection
Mwaigwisya, Solomon, Assiri, Rasha Assad M, O'Grady, Justin
Published in Expert review of molecular diagnostics (01.05.2015)
Published in Expert review of molecular diagnostics (01.05.2015)
Get more information
Journal Article
Rapid and accurate detection of Mycobacterium tuberculosis in sputum samples by Cepheid Xpert MTB/RIF assay--a clinical validation study
Rachow, Andrea, Zumla, Alimuddin, Heinrich, Norbert, Rojas-Ponce, Gabriel, Mtafya, Bariki, Reither, Klaus, Ntinginya, Elias N, O'Grady, Justin, Huggett, Jim, Dheda, Keertan, Boehme, Catharina, Perkins, Mark, Saathoff, Elmar, Hoelscher, Michael
Published in PloS one (29.06.2011)
Published in PloS one (29.06.2011)
Get full text
Journal Article
Genomic diversity of Escherichia coli from healthy children in rural Gambia
Foster-Nyarko, Ebenezer, Alikhan, Nabil-Fareed, Ikumapayi, Usman N, Sarwar, Golam, Okoi, Catherine, Tientcheu, Peggy-Estelle Maguiagueu, Defernez, Marianne, O'Grady, Justin, Antonio, Martin, Pallen, Mark J
Published in PeerJ (San Francisco, CA) (06.01.2021)
Published in PeerJ (San Francisco, CA) (06.01.2021)
Get full text
Journal Article
Assessment of the Xpert MTB/RIF assay for diagnosis of tuberculosis with gastric lavage aspirates in children in sub-Saharan Africa: a prospective descriptive study
Bates, Matthew, PhD, O'Grady, Justin, PhD, Maeurer, Markus, Prof, Tembo, John, MSc, Chilukutu, Lophina, BSc, Chabala, Chishala, MMed, Kasonde, Richard, BSc, Mulota, Peter, BSc, Mzyece, Judith, BSc, Chomba, Mumba, BSc, Mukonda, Lukundo, BSc, Mumba, Maxwell, BSc, Kapata, Nathan, MBChB, Rachow, Andrea, MD, Clowes, Petra, MD, Hoelscher, Michael, Prof, Mwaba, Peter, FRCP, Zumla, Alimuddin, Prof
Published in The Lancet infectious diseases (2013)
Published in The Lancet infectious diseases (2013)
Get full text
Journal Article
Review of multidrug-resistant and extensively drug-resistant TB: global perspectives with a focus on sub-Saharan Africa
Migliori, Giovanni Battista, Dheda, Keertan, Centis, Rosella, Mwaba, Peter, Bates, Matthew, O'Grady, Justin, Hoelscher, Michael, Zumla, Alimuddin
Published in Tropical medicine & international health (01.09.2010)
Published in Tropical medicine & international health (01.09.2010)
Get full text
Journal Article
MinION Analysis and Reference Consortium: Phase 1 data release and analysis
Ip, Camilla L C, Loose, Matthew, Tyson, John R, de Cesare, Mariateresa, Brown, Bonnie L, Jain, Miten, Leggett, Richard M, Eccles, David A, Zalunin, Vadim, Urban, John M, Piazza, Paolo, Bowden, Rory J, Paten, Benedict, Mwaigwisya, Solomon, Batty, Elizabeth M, Simpson, Jared T, Snutch, Terrance P, Birney, Ewan, Buck, David, Goodwin, Sara, Jansen, Hans J, O'Grady, Justin, Olsen, Hugh E
Published in F1000 research (2015)
Published in F1000 research (2015)
Get full text
Journal Article
High sensitivity DNA detection using gold nanoparticle functionalised polyaniline nanofibres
Spain, Elaine, Kojima, Robert, Kaner, Richard B., Wallace, Gordan G., O’Grady, Justin, Lacey, Katrina, Barry, Thomas, Keyes, Tia E., Forster, Robert J.
Published in Biosensors & bioelectronics (15.01.2011)
Published in Biosensors & bioelectronics (15.01.2011)
Get full text
Journal Article
MinION Analysis and Reference Consortium: Phase 2 data release and analysis of R9.0 chemistry [version 1; peer review: 1 approved, 2 approved with reservations]
Jain, Miten, Tyson, John R, Loose, Matthew, Ip, Camilla L.C, Eccles, David A, O'Grady, Justin, Malla, Sunir, Leggett, Richard M, Wallerman, Ola, Jansen, Hans J, Zalunin, Vadim, Birney, Ewan, Brown, Bonnie L, Snutch, Terrance P, Olsen, Hugh E
Published in F1000 research (2017)
Published in F1000 research (2017)
Get full text
Journal Article