interferon-related gene signature for DNA damage resistance is a predictive marker for chemotherapy and radiation for breast cancer
Weichselbaum, Ralph R, Ishwaran, Hemant, Yoon, Taewon, Nuyten, Dimitry S.A, Baker, Samuel W, Khodarev, Nikolai, Su, Andy W, Shaikh, Arif Y, Roach, Paul, Kreike, Bas, Roizman, Bernard, Bergh, Jonas, Pawitan, Yudi, van de Vijver, Marc J, Minn, Andy J
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (25.11.2008)
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Journal Article
Gene expression programs in response to hypoxia: cell type specificity and prognostic significance in human cancers
Chi, Jen-Tsan, Wang, Zhen, Nuyten, Dimitry S A, Rodriguez, Edwin H, Schaner, Marci E, Salim, Ali, Wang, Yun, Kristensen, Gunnar B, Helland, Aslaug, Børresen-Dale, Anne-Lise, Giaccia, Amato, Longaker, Michael T, Hastie, Trevor, Yang, George P, van de Vijver, Marc J, Brown, Patrick O
Published in PLoS medicine (01.03.2006)
Published in PLoS medicine (01.03.2006)
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Robustness, Scalability, and Integration of a Wound-Response Gene Expression Signature in Predicting Breast Cancer Survival
Chang, Howard Y., Dimitry S. A. Nuyten, Sneddon, Julie B., Hastie, Trevor, Tibshirani, Robert, Sørlie, Therese, Dai, Hongyue, He, Yudong D., Laura J. van't Veer, Bartelink, Harry, van de Rijn, Matt, Brown, Patrick O., van de Vijver, Marc J.
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (08.03.2005)
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Journal Article
macrophage-stimulating protein pathway promotes metastasis in a mouse model for breast cancer and predicts poor prognosis in humans
Welm, Alana L, Sneddon, Julie B, Taylor, Carmen, Nuyten, Dimitry S.A, van de Vijver, Marc J, Hasegawa, Bruce H, Bishop, J. Michael
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2007)
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Journal Article
Determination of stromal signatures in breast carcinoma
West, Robert B, Nuyten, Dimitry S A, Subramanian, Subbaya, Nielsen, Torsten O, Corless, Christopher L, Rubin, Brian P, Montgomery, Kelli, Zhu, Shirley, Patel, Rajiv, Hernandez-Boussard, Tina, Goldblum, John R, Brown, Patrick O, van de Vijver, Marc, van de Rijn, Matt
Published in PLoS biology (01.06.2005)
Published in PLoS biology (01.06.2005)
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Journal Article
Predicting a local recurrence after breast-conserving therapy by gene expression profiling
Nuyten, Dimitry S A, Kreike, Bas, Hart, Augustinus A M, Chi, Jen-Tsan Ashley, Sneddon, Julie B, Wessels, Lodewyk F A, Peterse, Hans J, Bartelink, Harry, Brown, Patrick O, Chang, Howard Y, van de Vijver, Marc J
Published in Breast cancer research : BCR (01.01.2006)
Published in Breast cancer research : BCR (01.01.2006)
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Journal Article
Revealing Targeted Therapy for Human Cancer by Gene Module Maps
WONG, David J, NUYTEN, Dimitry S. A, REGEV, Aviv, MEIHONG LIN, ADLER, Adam S, SEGAL, Eran, VAN DE VIJVER, Marc J, CHANG, Howard Y
Published in Cancer research (Chicago, Ill.) (15.01.2008)
Published in Cancer research (Chicago, Ill.) (15.01.2008)
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Journal Article
Gene expression programs of human smooth muscle cells: tissue-specific differentiation and prognostic significance in breast cancers
Chi, Jen-Tsan, Rodriguez, Edwin H, Wang, Zhen, Nuyten, Dimitry S A, Mukherjee, Sayan, van de Rijn, Matt, van de Vijver, Marc J, Hastie, Trevor, Brown, Patrick O
Published in PLoS genetics (01.09.2007)
Published in PLoS genetics (01.09.2007)
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Journal Article
Genetic regulators of large-scale transcriptional signatures in cancer
Chang, Howard Y, Adler, Adam S, Lin, Meihong, Horlings, Hugo, Nuyten, Dimitry S A, van de Vijver, Marc J
Published in Nature genetics (01.04.2006)
Published in Nature genetics (01.04.2006)
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Journal Article
Local Recurrence after Breast-Conserving Therapy in Relation to Gene Expression Patterns in a Large Series of Patients
Kreike, Bas, Halfwerk, Hans, Armstrong, Nicola, Bult, Peter, Foekens, John A, Veltkamp, Sanne C, Nuyten, Dimitry S A, Bartelink, Harry, van de Vijver, Marc J
Published in Clinical cancer research (15.06.2009)
Published in Clinical cancer research (15.06.2009)
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Journal Article
Mouse Mammary Gland Involution mRNA Signature Identifies Biological Pathways Potentially Associated with Breast Cancer Metastasis
Stein, Torsten, Salomonis, Nathan, Nuyten, Dimitry S. A, van de Vijver, Marc J, Gusterson, Barry A
Published in Journal of mammary gland biology and neoplasia (01.06.2009)
Published in Journal of mammary gland biology and neoplasia (01.06.2009)
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Journal Article
Gene Expression Profiling in Breast Cancer: Understanding the Molecular Basis of Histologic Grade To Improve Prognosis
Sotiriou, Christos, Wirapati, Pratyaksha, Loi, Sherene, Harris, Adrian, Fox, Steve, Smeds, Johanna, Nordgren, Hans, Farmer, Pierre, Praz, Viviane, Haibe-Kains, Benjamin, Desmedt, Christine, Larsimont, Denis, Cardoso, Fatima, Peterse, Hans, Nuyten, Dimitry, Buyse, Marc, Van de Vijver, Marc J., Bergh, Jonas, Piccart, Martine, Delorenzi, Mauro
Published in JNCI : Journal of the National Cancer Institute (15.02.2006)
Published in JNCI : Journal of the National Cancer Institute (15.02.2006)
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Journal Article
Lung metastasis genes couple breast tumor size and metastatic spread
Minn, Andy J, Gupta, Gaorav P, Padua, David, Bos, Paula, Nguyen, Don X, Nuyten, Dimitry, Kreike, Bas, Zhang, Yi, Wang, Yixin, Ishwaran, Hemant, Foekens, John A, van de Vijver, Marc, Massagué, Joan
Published in Proceedings of the National Academy of Sciences - PNAS (17.04.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (17.04.2007)
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Journal Article
Integration of DNA Copy Number Alterations and Prognostic Gene Expression Signatures in Breast Cancer Patients
Horlings, Hugo M, Lai, Carmen, Nuyten, Dimitry S A, Halfwerk, Hans, Kristel, Petra, van Beers, Erik, Joosse, Simon A, Klijn, Christiaan, Nederlof, Petra M, Reinders, Marcel J T, Wessels, Lodewyk F A, van de Vijver, Marc J
Published in Clinical cancer research (15.01.2010)
Published in Clinical cancer research (15.01.2010)
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Journal Article
Combining biological gene expression signatures in predicting outcome in breast cancer: An alternative to supervised classification
Nuyten, Dimitry S.A, Hastie, Trevor, Chi, Jen-Tsan Ashley, Chang, Howard Y, van de Vijver, Marc J
Published in European journal of cancer (1990) (01.10.2008)
Published in European journal of cancer (1990) (01.10.2008)
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Journal Article
Impact of supervised gene signatures of early hypoxia on patient survival
Seigneuric, Renaud, Starmans, Maud H.W, Fung, Glenn, Krishnapuram, Balaji, Nuyten, Dimitry S.A, van Erk, Arie, Magagnin, Michael G, Rouschop, Kasper M, Krishnan, Sriram, Rao, R. Bharat, Evelo, Chris T.A, Begg, Adrian C, Wouters, Bradly G, Lambin, Philippe
Published in Radiotherapy and oncology (01.06.2007)
Published in Radiotherapy and oncology (01.06.2007)
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