ColiSeq: a multiplex amplicon assay that provides strain level resolution of Escherichia coli directly from clinical specimens
Williamson, Charles H D, Vazquez, Adam J, Nunnally, Amalee E, Kyger, Kristen, Fofanov, Viacheslav Y, Furstenau, Tara N, Hornstra, Heidie M, Terriquez, Joel, Keim, Paul, Sahl, Jason W
Published in Microbiology spectrum (23.04.2024)
Published in Microbiology spectrum (23.04.2024)
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Journal Article
Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins
Stone, Nathan E., Nunnally, Amalee E., Jimenez, Victor, Cope, Emily K., Sahl, Jason W., Sheridan, Krystal, Hornstra, Heidie M., Vinocur, Jacob, Settles, Erik W., Headley, Kyle C., Williamson, Charles H.D., Rideout, Jai Ram, Bolyen, Evan, Caporaso, J. Gregory, Terriquez, Joel, Monroy, Fernando P., Busch, Joseph D., Keim, Paul, Wagner, David M.
Published in Anaerobe (01.08.2019)
Published in Anaerobe (01.08.2019)
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Journal Article
Identification of novel, cryptic Clostridioides species isolates from environmental samples collected from diverse geographical locations
Williamson, Charles Hall Davis, Stone, Nathan E, Nunnally, Amalee E, Roe, Chandler C, Vazquez, Adam J, Lucero, Samantha A, Hornstra, Heidie, Wagner, David M, Keim, Paul, Rupnik, Maja, Janezic, Sandra, Sahl, Jason William
Published in Microbial genomics (01.02.2022)
Published in Microbial genomics (01.02.2022)
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Journal Article
A local-scale One Health genomic surveillance of Clostridioides difficile demonstrates highly related strains from humans, canines, and the environment
Williamson, Charles H D, Roe, Chandler C, Terriquez, Joel, Hornstra, Heidie, Lucero, Samantha, Nunnally, Amalee E, Vazquez, Adam J, Vinocur, Jacob, Plude, Carmel, Nienstadt, Linus, Stone, Nathan E, Celona, Kimberly R, Wagner, David M, Keim, Paul, Sahl, Jason W
Published in Microbial genomics (01.06.2023)
Published in Microbial genomics (01.06.2023)
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Journal Article
Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019
Stone, Nathan E, Nunnally, Amalee E, Roe, Chandler C, Hornstra, Heidie M, Wagner, David M, Sahl, Jason W
Published in Microbiology resource announcements (04.03.2021)
Published in Microbiology resource announcements (04.03.2021)
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Journal Article
A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network
Williamson, Charles H D, Stone, Nathan E, Nunnally, Amalee E, Hornstra, Heidie M, Wagner, David M, Roe, Chandler C, Vazquez, Adam J, Nandurkar, Nivedita, Vinocur, Jacob, Terriquez, Joel, Gillece, John, Travis, Jason, Lemmer, Darrin, Keim, Paul, Sahl, Jason W
Published in Microbial genomics (01.07.2019)
Published in Microbial genomics (01.07.2019)
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Journal Article