Pervasive functional translation of noncanonical human open reading frames
Chen, Jin, Brunner, Andreas-David, Cogan, J Zachery, Nuñez, James K, Fields, Alexander P, Adamson, Britt, Itzhak, Daniel N, Li, Jason Y, Mann, Matthias, Leonetti, Manuel D, Weissman, Jonathan S
Published in Science (American Association for the Advancement of Science) (06.03.2020)
Published in Science (American Association for the Advancement of Science) (06.03.2020)
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Journal Article
CRISPR Immunological Memory Requires a Host Factor for Specificity
Nuñez, James K., Bai, Lawrence, Harrington, Lucas B., Hinder, Tracey L., Doudna, Jennifer A.
Published in Molecular cell (16.06.2016)
Published in Molecular cell (16.06.2016)
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Journal Article
A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response
Adamson, Britt, Norman, Thomas M., Jost, Marco, Cho, Min Y., Nuñez, James K., Chen, Yuwen, Villalta, Jacqueline E., Gilbert, Luke A., Horlbeck, Max A., Hein, Marco Y., Pak, Ryan A., Gray, Andrew N., Gross, Carol A., Dixit, Atray, Parnas, Oren, Regev, Aviv, Weissman, Jonathan S.
Published in Cell (15.12.2016)
Published in Cell (15.12.2016)
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Journal Article
Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing
Nuñez, James K., Chen, Jin, Pommier, Greg C., Cogan, J. Zachery, Replogle, Joseph M., Adriaens, Carmen, Ramadoss, Gokul N., Shi, Quanming, Hung, King L., Samelson, Avi J., Pogson, Angela N., Kim, James Y.S., Chung, Amanda, Leonetti, Manuel D., Chang, Howard Y., Kampmann, Martin, Bernstein, Bradley E., Hovestadt, Volker, Gilbert, Luke A., Weissman, Jonathan S.
Published in Cell (29.04.2021)
Published in Cell (29.04.2021)
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Journal Article
Inducible and multiplex gene regulation using CRISPR–Cpf1-based transcription factors
Tak, Y Esther, Kleinstiver, Benjamin P, Nuñez, James K, Hsu, Jonathan Y, Horng, Joy E, Gong, Jingyi, Weissman, Jonathan S, Joung, J Keith
Published in Nature methods (01.12.2017)
Published in Nature methods (01.12.2017)
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Journal Article
Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1
Musselman, Catherine A, Avvakumov, Nikita, Watanabe, Reiko, Abraham, Christopher G, Lalonde, Marie-Eve, Hong, Zehui, Allen, Christopher, Roy, Siddhartha, Nuñez, James K, Nickoloff, Jac, Kulesza, Caroline A, Yasui, Akira, Côté, Jacques, Kutateladze, Tatiana G
Published in Nature structural & molecular biology (01.12.2012)
Published in Nature structural & molecular biology (01.12.2012)
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Journal Article
BRD2 inhibition blocks SARS-CoV-2 infection by reducing transcription of the host cell receptor ACE2
Samelson, Avi J., Tran, Quang Dinh, Robinot, Rémy, Carrau, Lucia, Rezelj, Veronica V., Kain, Alice Mac, Chen, Merissa, Ramadoss, Gokul N., Guo, Xiaoyan, Lim, Shion A., Lui, Irene, Nuñez, James K., Rockwood, Sarah J., Wang, Jianhui, Liu, Na, Carlson-Stevermer, Jared, Oki, Jennifer, Maures, Travis, Holden, Kevin, Weissman, Jonathan S., Wells, James A., Conklin, Bruce R., TenOever, Benjamin R., Chakrabarti, Lisa A., Vignuzzi, Marco, Tian, Ruilin, Kampmann, Martin
Published in Nature cell biology (01.01.2022)
Published in Nature cell biology (01.01.2022)
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Journal Article
Systematic functional interrogation of SARS-CoV-2 host factors using Perturb-seq
Sunshine, Sara, Puschnik, Andreas S., Replogle, Joseph M., Laurie, Matthew T., Liu, Jamin, Zha, Beth Shoshana, Nuñez, James K., Byrum, Janie R., McMorrow, Aidan H., Frieman, Matthew B., Winkler, Juliane, Qiu, Xiaojie, Rosenberg, Oren S., Leonetti, Manuel D., Ye, Chun Jimmie, Weissman, Jonathan S., DeRisi, Joseph L., Hein, Marco Y.
Published in Nature communications (06.10.2023)
Published in Nature communications (06.10.2023)
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Journal Article
Integrase-mediated spacer acquisition during CRISPR–Cas adaptive immunity
Nuñez, James K., Lee, Amy S. Y., Engelman, Alan, Doudna, Jennifer A.
Published in Nature (London) (12.03.2015)
Published in Nature (London) (12.03.2015)
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Journal Article
Foreign DNA capture during CRISPR–Cas adaptive immunity
Nuñez, James K., Harrington, Lucas B., Kranzusch, Philip J., Engelman, Alan N., Doudna, Jennifer A.
Published in Nature (London) (26.11.2015)
Published in Nature (London) (26.11.2015)
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Journal Article
Chemical and Biophysical Modulation of Cas9 for Tunable Genome Engineering
Nuñez, James K, Harrington, Lucas B, Doudna, Jennifer A
Published in ACS chemical biology (18.03.2016)
Published in ACS chemical biology (18.03.2016)
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Journal Article
Neural space-time model for dynamic multi-shot imaging
Cao, Ruiming, Divekar, Nikita S, Nuñez, James K, Upadhyayula, Srigokul, Waller, Laura
Published in Nature methods (24.09.2024)
Published in Nature methods (24.09.2024)
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Journal Article
CRISPRoff epigenetic editing for programmable gene silencing in human cells without DNA breaks
Pattali, Rithu K, Ornelas, Izaiah J, Nguyen, Carolyn D, Xu, Da, Divekar, Nikita S, Nuñez, James K
Published in bioRxiv (17.09.2024)
Published in bioRxiv (17.09.2024)
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Journal Article
Pervasive functional translation of non-canonical human open reading frames
Chen, Jin, Brunner, Andreas-David, Cogan, J. Zachery, Nuñez, James K., Fields, Alexander P., Adamson, Britt, Itzhak, Daniel N., Li, Jason Y., Mann, Matthias, Leonetti, Manuel D., Weissman, Jonathan S.
Published in Science (American Association for the Advancement of Science) (06.03.2020)
Published in Science (American Association for the Advancement of Science) (06.03.2020)
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Journal Article
Foreign DNA capture during CRISPR–Cas adaptive immunity
Nuñez, James K., Harrington, Lucas B., Kranzusch, Philip J., Engelman, Alan N., Doudna, Jennifer A.
Published in Nature (London) (16.06.2016)
Published in Nature (London) (16.06.2016)
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Journal Article