Detection and mapping of 5-methylcytosine and 5-hydroxymethylcytosine with nanopore MspA
Laszlo, Andrew H., Derrington, Ian M., Brinkerhoff, Henry, Langford, Kyle W., Nova, Ian C., Samson, Jenny Mae, Bartlett, Joshua J., Pavlenok, Mikhail, Gundlach, Jens H.
Published in Proceedings of the National Academy of Sciences - PNAS (19.11.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (19.11.2013)
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Journal Article
Revealing dynamics of helicase translocation on single-stranded DNA using high-resolution nanopore tweezers
Craig, Jonathan M., Laszlo, Andrew H., Brinkerhoff, Henry, Derrington, Ian M., Noakes, Matthew T., Nova, Ian C., Tickman, Benjamin I., Doering, Kenji, de Leeuw, Noah F., Gundlach, Jens H.
Published in Proceedings of the National Academy of Sciences - PNAS (07.11.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (07.11.2017)
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Journal Article
Investigating asymmetric salt profiles for nanopore DNA sequencing with biological porin MspA
Nova, Ian C, Derrington, Ian M, Craig, Jonathan M, Noakes, Matthew T, Tickman, Benjamin I, Doering, Kenji, Higinbotham, Hugh, Laszlo, Andrew H, Gundlach, Jens H
Published in PloS one (27.07.2017)
Published in PloS one (27.07.2017)
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Journal Article
Direct Detection of Unnatural DNA Nucleotides dNaM and d5SICS using the MspA Nanopore
Craig, Jonathan M, Laszlo, Andrew H, Derrington, Ian M, Ross, Brian C, Brinkerhoff, Henry, Nova, Ian C, Doering, Kenji, Tickman, Benjamin I, Svet, Mark T, Gundlach, Jens H
Published in PloS one (20.11.2015)
Published in PloS one (20.11.2015)
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Journal Article
Tailored Polymeric Membranes for Mycobacterium Smegmatis Porin A (MspA) Based Biosensors
Morton, Danielle, Mortezaei, Shahab, Yemenicioglu, Sukru, Isaacman, Michael J, Nova, Ian C, Gundlach, Jens H, Theogarajan, Luke
Published in Journal of materials chemistry. B, Materials for biology and medicine (07.07.2015)
Published in Journal of materials chemistry. B, Materials for biology and medicine (07.07.2015)
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Journal Article
Decoding long nanopore sequencing reads of natural DNA
Laszlo, Andrew H, Derrington, Ian M, Ross, Brian C, Brinkerhoff, Henry, Adey, Andrew, Nova, Ian C, Craig, Jonathan M, Langford, Kyle W, Samson, Jenny Mae, Daza, Riza, Doering, Kenji, Shendure, Jay, Gundlach, Jens H
Published in Nature biotechnology (01.08.2014)
Published in Nature biotechnology (01.08.2014)
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Journal Article
Subangstrom single-molecule measurements of motor proteins using a nanopore
Derrington, Ian M, Craig, Jonathan M, Stava, Eric, Laszlo, Andrew H, Ross, Brian C, Brinkerhoff, Henry, Nova, Ian C, Doering, Kenji, Tickman, Benjamin I, Ronaghi, Mostafa, Mandell, Jeffrey G, Gunderson, Kevin L, Gundlach, Jens H
Published in Nature biotechnology (01.10.2015)
Published in Nature biotechnology (01.10.2015)
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Journal Article
Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase
Nova, Ian C., Craig, Jonathan M., Mazumder, Abhishek, Laszlo, Andrew H., Derrington, Ian M., Noakes, Matthew T., Brinkerhoff, Henry, Yang, Shuya, Vahedian-Movahed, Hanif, Li, Lingting, Zhang, Yu, Bowman, Jasmine L., Huang, Jesse R., Mount, Jonathan W., Ebright, Richard H., Gundlach, Jens H.
Published in Proceedings of the National Academy of Sciences - PNAS (16.07.2024)
Published in Proceedings of the National Academy of Sciences - PNAS (16.07.2024)
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Journal Article
Determining the effects of DNA sequence on Hel308 helicase translocation along single-stranded DNA using nanopore tweezers
Craig, Jonathan M, Laszlo, Andrew H, Nova, Ian C, Brinkerhoff, Henry, Noakes, Matthew T, Baker, Katherine S, Bowman, Jasmine L, Higinbotham, Hugh R, Mount, Jonathan W, Gundlach, Jens H
Published in Nucleic acids research (18.03.2019)
Published in Nucleic acids research (18.03.2019)
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Journal Article
Sequence-dependent mechanochemical coupling of helicase translocation and unwinding at single-nucleotide resolution
Laszlo, Andrew H, Craig, Jonathan M, Gavrilov, Momčilo, Tippana, Ramreddy, Nova, Ian C, Huang, Jesse R, Kim, Hwanhee C, Abell, Sarah J, deCampos-Stairiker, Mallory, Mount, Jonathan W, Bowman, Jasmine L, Baker, Katherine S, Higinbotham, Hugh, Bobrovnikov, Dmitriy, Ha, Taekjip, Gundlach, Jens H
Published in Proceedings of the National Academy of Sciences - PNAS (06.09.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (06.09.2022)
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Journal Article
Uncovering the Molecular Basis for Sequence-Dependent Translocation in a Superfamily 2 Helicase using High-Resolution Nanopore Tweezers
Craig, Jonathan M., Marx, Sinduja K., Laszlo, Andrew H., Nova, Ian C., Kim, Hwanhee C., Huang, Jesse R., Abell, Sarah J., Gundlach, Jens H.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
SV40 Large T Antigen Helicase Unwinds Double-Stranded DNA in Single-Nucleotide Steps as Revealed by Nanopore Tweezers
Thomas, Christopher A., Craig, Jonathan M., Laszlo, Andrew H., Nova, Ian C., Xie, Sherry, Huang, Jesse R., Kim, Hwanhee C., Abell, Sarah J., Yardimci, Hasan, Gundlach, Jens H.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Tracking Single RNAP Enzyme Steps and State Transitions During Elongation and Pausing with Nanopore Tweezers
Nova, Ian C., Mazumder, Abhishek, Craig, Jonathan M., Laszlo, Andrew H., Noakes, Matthew T., Brinkerhoff, Henry D., Yang, Shuya, Mount, Jonathan W., Huang, Jesse, Ebright, Richard H., Gundlach, Jens H.
Published in Biophysical journal (07.02.2020)
Published in Biophysical journal (07.02.2020)
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Journal Article
Asymmetric Salt Profiles Expand Reaction Conditions for Nanopore Sequencing with MspA
Nova, Ian C., Derrington, Ian M., Tickman, Benjamin I., Craig, Jonathan M., Noakes, Matthew, Gundlach, Jens
Published in Biophysical journal (16.02.2016)
Published in Biophysical journal (16.02.2016)
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Journal Article
RNA Polymerase Transcription Elongation Pasuing and Termination Investigated at Super Resolution with the Mspa Nanopore
Nova, Ian C., Mazumder, Abhishek, Derrington, Ian M., Laszlo, Andrew H., Ebright, Richard H., Gundlach, Jens H.
Published in Biophysical journal (03.02.2017)
Published in Biophysical journal (03.02.2017)
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Journal Article
Determining Dynamics of RNA Polymerase Elongation and Pausing using Nanopore Tweezers
Nova, Ian C., Craig, Jonathan M., Laszlo, Andrew H., Mazumder, Abhishek, Brinkerhoff, Henry, Derrington, Ian M., Noakes, Matthew T., Mount, Jonathan W., Huang, Jesse, Bowman, Jasmine, Ebright, Richard H., Gundlach, Jens H.
Published in Biophysical journal (15.02.2019)
Published in Biophysical journal (15.02.2019)
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Journal Article
Single-Molecule Picometer Resolution Nanopore Tweezers Resolution
Gundlach, Jens H., Derrington, Ian M., Laszlo, Andrew H., Craig, Jonathan M., Nova, Ian C., Brinkerhoff, Henry, Noakes, Mathew T., Ebright, Richard H., Mazumder, Abhishek
Published in Biophysical journal (03.02.2017)
Published in Biophysical journal (03.02.2017)
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Journal Article
Analysis of Force Dependence of Translocation and Unwinding of Helicase PCRA using SPRNT
Laszlo, Andrew H., Craig, Jonathan M., Brinkerhoff, Henry, Nova, Ian C., Noakes, Matthew T., Mount, Jonathan W., Bowman, Jasmine O., Higinbotham, Hugh, Baker, Katherine, Huang, Jesse, Tippana, Ramreddy, Gavrilov, Momcilo, Ha, Taekjip, Gundlach, Jens H.
Published in Biophysical journal (02.02.2018)
Published in Biophysical journal (02.02.2018)
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Journal Article