MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis
Madelaine, Romain, Sloan, Steven A., Huber, Nina, Notwell, James H., Leung, Louis C., Skariah, Gemini, Halluin, Caroline, Paşca, Sergiu P., Bejerano, Gill, Krasnow, Mark A., Barres, Ben A., Mourrain, Philippe
Published in Cell reports (Cambridge) (15.08.2017)
Published in Cell reports (Cambridge) (15.08.2017)
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Journal Article
A screen for deeply conserved non-coding GWAS SNPs uncovers a MIR-9-2 functional mutation associated to retinal vasculature defects in human
Madelaine, Romain, Notwell, James H, Skariah, Gemini, Halluin, Caroline, Chen, Charles C, Bejerano, Gill, Mourrain, Philippe
Published in Nucleic acids research (20.04.2018)
Published in Nucleic acids research (20.04.2018)
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Journal Article
TBR1 regulates autism risk genes in the developing neocortex
Notwell, James H, Heavner, Whitney E, Darbandi, Siavash Fazel, Katzman, Sol, McKenna, William L, Ortiz-Londono, Christian F, Tastad, David, Eckler, Matthew J, Rubenstein, John L R, McConnell, Susan K, Chen, Bin, Bejerano, Gill
Published in Genome research (01.08.2016)
Published in Genome research (01.08.2016)
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Journal Article
A Guide to Single-Cell Transcriptomics in Adult Rodent Brain: The Medium Spiny Neuron Transcriptome Revisited
Ho, Hanson, Both, Matt De, Siniard, Ashley, Sharma, Sasha, Notwell, James H, Wallace, Michelle, Leone, Dino P, Nguyen, Amy, Zhao, Eric, Lee, Hannah, Zwilling, Daniel, Thompson, Kimberly R, Braithwaite, Steven P, Huentelman, Matthew, Portmann, Thomas
Published in Frontiers in cellular neuroscience (15.06.2018)
Published in Frontiers in cellular neuroscience (15.06.2018)
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Journal Article
The enhancer landscape during early neocortical development reveals patterns of dense regulation and co-option
Wenger, Aaron M, Clarke, Shoa L, Notwell, James H, Chung, Tisha, Tuteja, Geetu, Guturu, Harendra, Schaar, Bruce T, Bejerano, Gill
Published in PLoS genetics (01.08.2013)
Published in PLoS genetics (01.08.2013)
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A family of transposable elements co-opted into developmental enhancers in the mouse neocortex
Notwell, James H, Chung, Tisha, Heavner, Whitney, Bejerano, Gill
Published in Nature communications (25.03.2015)
Published in Nature communications (25.03.2015)
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Transcription factor expression defines subclasses of developing projection neurons highly similar to single-cell RNA-seq subtypes
Heavner, Whitney E., Ji, Shaoyi, Notwell, James H., Dyer, Ethan S., Tseng, Alex M., Birgmeier, Johannes, Yoo, Boyoung, Bejerano, Gill, McConnell, Susan K.
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (06.10.2020)
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Computational methods to detect conserved non-genic elements in phylogenetically isolated genomes: application to zebrafish
Hiller, Michael, Agarwal, Saatvik, Notwell, James H, Parikh, Ravi, Guturu, Harendra, Wenger, Aaron M, Bejerano, Gill
Published in Nucleic acids research (01.08.2013)
Published in Nucleic acids research (01.08.2013)
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Journal Article
The Enhancer Landscape during Early Neocortical Development Reveals Patterns of Dense Regulation and Co-option: e1003728
Wenger, Aaron M, Clarke, Shoa L, Notwell, James H, Chung, Tisha, Tuteja, Geetu, Guturu, Harendra, Schaar, Bruce T, Bejerano, Gill
Published in PLoS genetics (01.08.2013)
Published in PLoS genetics (01.08.2013)
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ADMET property prediction through combinations of molecular fingerprints
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Journal Article
Differential chromatin accessibility in developing projection neurons is correlated with transcriptional regulation of cell fate
Heavner, Whitney E, Ji, Shaoyi, Notwell, James H, Dyer, Ethan S, Tseng, Alex M, Birgmeier, Johannes, Yoo, Boyoung, Bejerano, Gill, Mcconnell, Susan K
Published in bioRxiv (21.05.2019)
Published in bioRxiv (21.05.2019)
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