Comparing antimicrobial resistant genes and phenotypes across multiple sequencing platforms and assays for Enterobacterales clinical isolates
Rose, Rebecca, Nolan, David J, Ashcraft, Deborah, Feehan, Amy K, Velez-Climent, Leonor, Huston, Christopher, Lain, Benjamin, Rosenthal, Simon, Miele, Lucio, Fogel, Gary B, Pankey, George, Garcia-Diaz, Julia, Lamers, Susanna L
Published in BMC microbiology (18.08.2023)
Published in BMC microbiology (18.08.2023)
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Journal Article
The Persistence of HIV Diversity, Transcription, and Nef Protein in Kaposi's Sarcoma Tumors during Antiretroviral Therapy
Nolan, David J, Rose, Rebecca, Zhang, Rongzhen, Leong, Alan, Fogel, Gary B, Scholte, Larissa L S, Bethony, Jeffrey M, Bracci, Paige, Lamers, Susanna L, McGrath, Michael S
Published in Viruses (01.12.2022)
Published in Viruses (01.12.2022)
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Journal Article
Anti-α4 antibody treatment blocks virus traffic to the brain and gut early, and stabilizes CNS injury late in infection
Campbell, Jennifer H, Ratai, Eva-Maria, Autissier, Patrick, Nolan, David J, Tse, Samantha, Miller, Andrew D, González, R Gilberto, Salemi, Marco, Burdo, Tricia H, Williams, Kenneth C
Published in PLoS pathogens (01.12.2014)
Published in PLoS pathogens (01.12.2014)
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Journal Article
Genomic Investigation of a Mycobacterium tuberculosis Outbreak Involving Prison and Community Cases in Florida, United States
Séraphin, Marie Nancy, Didelot, Xavier, Nolan, David J, May, Justin R, Khan, Md Siddiqur Rahman, Murray, Ellen R, Salemi, Marco, Morris, J Glenn, Lauzardo, Michael
Published in The American journal of tropical medicine and hygiene (01.01.2018)
Published in The American journal of tropical medicine and hygiene (01.01.2018)
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Journal Article
Whole-genome sequencing of carbapenem-resistant Enterobacterales isolates in southeast Louisiana reveals persistent genetic clusters spanning multiple locations
Rose, Rebecca, Feehan, Amy, Lain, Benjamin N., Ashcraft, Deborah, Nolan, David J., Velez-Climent, Leonor, Huston, Christopher, LaFleur, Tessa, Rosenthal, Simon, Fogel, Gary B., Miele, Lucio, Pankey, George, Garcia-Diaz, Julia, Lamers, Susanna L.
Published in Journal of infection and public health (01.12.2023)
Published in Journal of infection and public health (01.12.2023)
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Journal Article
Protocol for the simultaneous isolation of DNA, RNA, and miRNA from a single archived Kaposi sarcoma biopsy
Scholte, Larissa L.S., Browne, Justin, Nolan, David J., St. John, Peyton, Tracy, Katherine, Thur, Rafaela S., Li, Ghangzhao, Lamers, Susanna L., Bracci, Paige, McGrath, Michael S., Bethony, Jeffrey M.
Published in STAR protocols (04.10.2024)
Published in STAR protocols (04.10.2024)
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Journal Article
HIV DNA Is Frequently Present within Pathologic Tissues Evaluated at Autopsy from Combined Antiretroviral Therapy-Treated Patients with Undetectable Viral Loads
Lamers, Susanna L, Rose, Rebecca, Maidji, Ekaterina, Agsalda-Garcia, Melissa, Nolan, David J, Fogel, Gary B, Salemi, Marco, Garcia, Debra L, Bracci, Paige, Yong, William, Commins, Deborah, Said, Jonathan, Khanlou, Negar, Hinkin, Charles H, Sueiras, Miguel Valdes, Mathisen, Glenn, Donovan, Suzanne, Shiramizu, Bruce, Stoddart, Cheryl A, McGrath, Michael S, Singer, Elyse J
Published in Journal of virology (15.10.2016)
Published in Journal of virology (15.10.2016)
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Journal Article
Comparing Gold-Standard Sanger Sequencing with Two Next-Generation Sequencing Platforms of HIV-1 gp160 Single Genome Amplicons
Nolan, David J, DaRoza, Jonathan, Brody, Robin, Ganta, Krishna, Luzuriaga, Katherine, Huston, Chris, Rosenthal, Simon, Lamers, Susanna L, Rose, Rebecca
Published in AIDS research and human retroviruses (10.07.2024)
Published in AIDS research and human retroviruses (10.07.2024)
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Journal Article
Ultradeep HIV-1 Proviral Envelope Sequencing Reveals Complex Population Structure within and between Brain and Splenic Tissues
Rose, Rebecca, Gonzalez-Perez, Maria Paz, Nolan, David J, Cross, Sissy, Lamers, Susanna L, Luzuriaga, Katherine
Published in Journal of virology (09.11.2021)
Published in Journal of virology (09.11.2021)
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Journal Article
Evidence for Mother-to-Child Transmission of Zika Virus Through Breast Milk
Blohm, Gabriela M, Lednicky, John A, Márquez, Marilianna, White, Sarah K, Loeb, Julia C, Pacheco, Carlos A, Nolan, David J, Paisie, Taylor, Salemi, Marco, Rodríguez-Morales, Alfonso J, Glenn Morris, Jr, J, Pulliam, Juliet R C, Paniz-Mondolfi, Alberto E
Published in Clinical infectious diseases (19.03.2018)
Published in Clinical infectious diseases (19.03.2018)
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Journal Article
Emergence of an early SARS-CoV-2 epidemic in the United States
Zeller, Mark, Gangavarapu, Karthik, Anderson, Catelyn, Smither, Allison R., Vanchiere, John A., Rose, Rebecca, Snyder, Daniel J., Dudas, Gytis, Watts, Alexander, Matteson, Nathaniel L., Robles-Sikisaka, Refugio, Marshall, Maximilian, Feehan, Amy K., Sabino-Santos, Gilberto, Bell-Kareem, Antoinette R., Hughes, Laura D., Alkuzweny, Manar, Snarski, Patricia, Garcia-Diaz, Julia, Scott, Rona S., Melnik, Lilia I., Klitting, Raphaëlle, McGraw, Michelle, Belda-Ferre, Pedro, DeHoff, Peter, Sathe, Shashank, Marotz, Clarisse, Grubaugh, Nathan D., Nolan, David J., Drouin, Arnaud C., Genemaras, Kaylynn J., Chao, Karissa, Topol, Sarah, Spencer, Emily, Nicholson, Laura, Aigner, Stefan, Yeo, Gene W., Farnaes, Lauge, Hobbs, Charlotte A., Laurent, Louise C., Knight, Rob, Hodcroft, Emma B., Khan, Kamran, Fusco, Dahlene N., Cooper, Vaughn S., Lemey, Phillipe, Gardner, Lauren, Lamers, Susanna L., Kamil, Jeremy P., Garry, Robert F., Suchard, Marc A., Andersen, Kristian G.
Published in Cell (16.09.2021)
Published in Cell (16.09.2021)
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Journal Article
Molecular surveillance of methicillin-resistant Staphylococcus aureus genomes in hospital unexpectedly reveals discordance between temporal and genetic clustering
Rose, Rebecca, Nolan, David J., Moot, Samual, Rodriguez, Christopher, Cross, Sissy, McCarter, Yvette S., Neilsen, Chad, Lamers, Susanna L.
Published in American journal of infection control (01.01.2021)
Published in American journal of infection control (01.01.2021)
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Journal Article
HIV-1 subtypes maintain distinctive physicochemical signatures in Nef domains associated with immunoregulation
Lamers, Susanna L., Fogel, Gary B., Liu, Enoch S., Nolan, David J., Rose, Rebecca, McGrath, Michael S.
Published in Infection, genetics and evolution (01.11.2023)
Published in Infection, genetics and evolution (01.11.2023)
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Journal Article
HIV Maintains an Evolving and Dispersed Population in Multiple Tissues during Suppressive Combined Antiretroviral Therapy in Individuals with Cancer
Rose, Rebecca, Lamers, Susanna L, Nolan, David J, Maidji, Ekaterina, Faria, N R, Pybus, Oliver G, Dollar, James J, Maruniak, Samuel A, McAvoy, Andrew C, Salemi, Marco, Stoddart, Cheryl A, Singer, Elyse J, McGrath, Michael S
Published in Journal of virology (15.10.2016)
Published in Journal of virology (15.10.2016)
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Journal Article
Absence of antibody responses to SARS-CoV-2 N protein in COVID-19 vaccine breakthrough cases
Vu, Luan D, Wallace, Shonta, Phan, Anh TQ, Christofferson, Rebecca C, Turner, Erik, Parker, Sean, Elkind-Hirsch, Karen, Landry, Darrell, Stansbury, Austin, Rose, Rebecca, Nolan, David J, Lamers, Susanna L, Hirezi, Michael, Ogden, Beverly, Cormier, Stephania A
Published in Experimental biology and medicine (Maywood, N.J.) (01.11.2022)
Published in Experimental biology and medicine (Maywood, N.J.) (01.11.2022)
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