Combined Mutation of Apc, Kras , and Tgfbr2 Effectively Drives Metastasis of Intestinal Cancer
Sakai, Eri, Nakayama, Mizuho, Oshima, Hiroko, Kouyama, Yuta, Niida, Atsushi, Fujii, Satoshi, Ochiai, Atsushi, Nakayama, Keiichi I, Mimori, Koshi, Suzuki, Yutaka, Hong, Chang Pyo, Ock, Chan-Young, Kim, Seong-Jin, Oshima, Masanobu
Published in Cancer research (Chicago, Ill.) (01.03.2018)
Published in Cancer research (Chicago, Ill.) (01.03.2018)
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Journal Article
Modeling colorectal cancer evolution
Niida, Atsushi, Mimori, Koshi, Shibata, Tatsuhiro, Miyano, Satoru
Published in Journal of human genetics (01.09.2021)
Published in Journal of human genetics (01.09.2021)
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Journal Article
Understanding intratumor heterogeneity by combining genome analysis and mathematical modeling
Niida, Atsushi, Nagayama, Satoshi, Miyano, Satoru, Mimori, Koshi
Published in Cancer science (01.04.2018)
Published in Cancer science (01.04.2018)
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Journal Article
Integrated molecular analysis of clear-cell renal cell carcinoma
Sato, Yusuke, Yoshizato, Tetsuichi, Shiraishi, Yuichi, Maekawa, Shigekatsu, Okuno, Yusuke, Kamura, Takumi, Shimamura, Teppei, Sato-Otsubo, Aiko, Nagae, Genta, Suzuki, Hiromichi, Nagata, Yasunobu, Yoshida, Kenichi, Kon, Ayana, Suzuki, Yutaka, Chiba, Kenichi, Tanaka, Hiroko, Niida, Atsushi, Fujimoto, Akihiro, Tsunoda, Tatsuhiko, Morikawa, Teppei, Maeda, Daichi, Kume, Haruki, Sugano, Sumio, Fukayama, Masashi, Aburatani, Hiroyuki, Sanada, Masashi, Miyano, Satoru, Homma, Yukio, Ogawa, Seishi
Published in Nature genetics (01.08.2013)
Published in Nature genetics (01.08.2013)
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Journal Article
The tumor-suppressive miR-497-195 cluster targets multiple cell-cycle regulators in hepatocellular carcinoma
Furuta, Mayuko, Kozaki, Ken-ichi, Tanimoto, Kousuke, Tanaka, Shinji, Arii, Shigeki, Shimamura, Teppei, Niida, Atsushi, Miyano, Satoru, Inazawa, Johji
Published in PloS one (27.03.2013)
Published in PloS one (27.03.2013)
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Journal Article
Combined landscape of single-nucleotide variants and copy number alterations in clonal hematopoiesis
Saiki, Ryunosuke, Momozawa, Yukihide, Nannya, Yasuhito, Nakagawa, Masahiro M., Ochi, Yotaro, Yoshizato, Tetsuichi, Terao, Chikashi, Kuroda, Yutaka, Shiraishi, Yuichi, Chiba, Kenichi, Tanaka, Hiroko, Niida, Atsushi, Imoto, Seiya, Matsuda, Koichi, Morisaki, Takayuki, Murakami, Yoshinori, Kamatani, Yoichiro, Matsuda, Shuichi, Kubo, Michiaki, Miyano, Satoru, Makishima, Hideki, Ogawa, Seishi
Published in Nature medicine (01.07.2021)
Published in Nature medicine (01.07.2021)
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Journal Article
Genetic landscape of external auditory canal squamous cell carcinoma
Sato, Kuniaki, Komune, Noritaka, Hongo, Takahiro, Koike, Kensuke, Niida, Atsushi, Uchi, Ryutaro, Noda, Teppei, Kogo, Ryunosuke, Matsumoto, Nozomu, Yamamoto, Hidetaka, Masuda, Muneyuki, Oda, Yoshinao, Mimori, Koshi, Nakagawa, Takashi
Published in Cancer science (01.08.2020)
Published in Cancer science (01.08.2020)
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Journal Article
Integrated Multiregional Analysis Proposing a New Model of Colorectal Cancer Evolution
Uchi, Ryutaro, Takahashi, Yusuke, Niida, Atsushi, Shimamura, Teppei, Hirata, Hidenari, Sugimachi, Keishi, Sawada, Genta, Iwaya, Takeshi, Kurashige, Junji, Shinden, Yoshiaki, Iguchi, Tomohiro, Eguchi, Hidetoshi, Chiba, Kenichi, Shiraishi, Yuichi, Nagae, Genta, Yoshida, Kenichi, Nagata, Yasunobu, Haeno, Hiroshi, Yamamoto, Hirofumi, Ishii, Hideshi, Doki, Yuichiro, Iinuma, Hisae, Sasaki, Shin, Nagayama, Satoshi, Yamada, Kazutaka, Yachida, Shinichi, Kato, Mamoru, Shibata, Tatsuhiro, Oki, Eiji, Saeki, Hiroshi, Shirabe, Ken, Oda, Yoshinao, Maehara, Yoshihiko, Komune, Shizuo, Mori, Masaki, Suzuki, Yutaka, Yamamoto, Ken, Aburatani, Hiroyuki, Ogawa, Seishi, Miyano, Satoru, Mimori, Koshi
Published in PLoS genetics (18.02.2016)
Published in PLoS genetics (18.02.2016)
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Spatial and single-cell transcriptomics decipher the cellular environment containing HLA-G+ cancer cells and SPP1+ macrophages in colorectal cancer
Ozato, Yuki, Kojima, Yasuhiro, Kobayashi, Yuta, Hisamatsu, Yuuichi, Toshima, Takeo, Yonemura, Yusuke, Masuda, Takaaki, Kagawa, Kouichi, Goto, Yasuhiro, Utou, Mitsuaki, Fukunaga, Mituko, Gamachi, Ayako, Imamura, Kiyomi, Kuze, Yuta, Zenkoh, Junko, Suzuki, Ayako, Niida, Atsushi, Hirose, Haruka, Hayashi, Shuto, Koseki, Jun, Oki, Eiji, Fukuchi, Satoshi, Murakami, Kazunari, Tobo, Taro, Nagayama, Satoshi, Uemura, Mamoru, Sakamoto, Takeharu, Oshima, Masanobu, Doki, Yuichiro, Eguchi, Hidetoshi, Mori, Masaki, Iwasaki, Takeshi, Oda, Yoshinao, Shibata, Tatsuhiro, Suzuki, Yutaka, Shimamura, Teppei, Mimori, Koshi
Published in Cell reports (Cambridge) (31.01.2023)
Published in Cell reports (Cambridge) (31.01.2023)
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Journal Article
Neutral Theory in Cancer Cell Population Genetics
Niida, Atsushi, Iwasaki, Watal M, Innan, Hideki
Published in Molecular biology and evolution (01.06.2018)
Published in Molecular biology and evolution (01.06.2018)
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Journal Article
Neoantimon: a multifunctional R package for identification of tumor-specific neoantigens
Hasegawa, Takanori, Hayashi, Shuto, Shimizu, Eigo, Mizuno, Shinichi, Niida, Atsushi, Yamaguchi, Rui, Miyano, Satoru, Nakagawa, Hidewaki, Imoto, Seiya
Published in Bioinformatics (15.09.2020)
Published in Bioinformatics (15.09.2020)
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Journal Article
Pan-cancer methylome analysis for cancer diagnosis and classification of cancer cell of origin
Shimizu, Dai, Taniue, Kenzui, Matsui, Yusuke, Haeno, Hiroshi, Araki, Hiromitsu, Miura, Fumihito, Fukunaga, Mitsuko, Shiraishi, Kenji, Miyamoto, Yuji, Tsukamoto, Seiichi, Komine, Aya, Kobayashi, Yuta, Kitagawa, Akihiro, Yoshikawa, Yukihiro, Sato, Kuniaki, Saito, Tomoko, Ito, Shuhei, Masuda, Takaaki, Niida, Atsushi, Suzuki, Makoto, Baba, Hideo, Ito, Takashi, Akimitsu, Nobuyoshi, Kodera, Yasuhiro, Mimori, Koshi
Published in Cancer gene therapy (01.05.2022)
Published in Cancer gene therapy (01.05.2022)
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Journal Article
The Evolving Genomic Landscape of Esophageal Squamous Cell Carcinoma Under Chemoradiotherapy
Hirata, Hidenari, Niida, Atsushi, Kakiuchi, Nobuyuki, Uchi, Ryutaro, Sugimachi, Keishi, Masuda, Takaaki, Saito, Tomoko, Kageyama, Shun-Ichiro, Motomura, Yushi, Ito, Shuhei, Yoshitake, Tadamasa, Tsurumaru, Daisuke, Nishimuta, Yusuke, Yokoyama, Akira, Hasegawa, Takanori, Chiba, Kenichi, Shiraishi, Yuichi, Du, Junyan, Miura, Fumihito, Morita, Masaru, Toh, Yasushi, Hirakawa, Masakazu, Shioyama, Yoshiyuki, Ito, Takashi, Akimoto, Tetsuo, Miyano, Satoru, Shibata, Tatsuhiro, Mori, Masaki, Suzuki, Yutaka, Ogawa, Seishi, Ishigami, Kousei, Mimori, Koshi
Published in Cancer research (Chicago, Ill.) (01.10.2021)
Published in Cancer research (Chicago, Ill.) (01.10.2021)
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Journal Article
Convergent genomic diversity and novel BCAA metabolism in intrahepatic cholangiocarcinoma
Kitagawa, Akihiro, Osawa, Tsuyoshi, Noda, Miwa, Kobayashi, Yuta, Aki, Sho, Nakano, Yusuke, Saito, Tomoko, Shimizu, Dai, Komatsu, Hisateru, Sugaya, Maki, Takahashi, Junichi, Kosai, Keisuke, Takao, Seiichiro, Motomura, Yushi, Sato, Kuniaki, Hu, Qingjiang, Fujii, Atsushi, Wakiyama, Hiroaki, Tobo, Taro, Uchida, Hiroki, Sugimachi, Keishi, Shibata, Kohei, Utsunomiya, Tohru, Kobayashi, Shogo, Ishii, Hideshi, Hasegawa, Takanori, Masuda, Takaaki, Matsui, Yusuke, Niida, Atsushi, Soga, Tomoyoshi, Suzuki, Yutaka, Miyano, Satoru, Aburatani, Hiroyuki, Doki, Yuichiro, Eguchi, Hidetoshi, Mori, Masaki, Nakayama, Keiichi I., Shimamura, Teppei, Shibata, Tatsuhiro, Mimori, Koshi
Published in British journal of cancer (29.06.2023)
Published in British journal of cancer (29.06.2023)
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Gene expression signatures as candidate biomarkers of response to PD-1 blockade in non-small cell lung cancers
Aiba, Tomoiki, Hattori, Chieko, Sugisaka, Jun, Shimizu, Hisashi, Ono, Hirotaka, Domeki, Yutaka, Saito, Ryohei, Kawana, Sachiko, Kawashima, Yosuke, Terayama, Keisuke, Toi, Yukihiro, Nakamura, Atsushi, Yamanda, Shinsuke, Kimura, Yuichiro, Suzuki, Yutaka, Niida, Atsushi, Sugawara, Shunichi
Published in PloS one (29.11.2021)
Published in PloS one (29.11.2021)
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Journal Article
phyC: Clustering cancer evolutionary trees
Matsui, Yusuke, Niida, Atsushi, Uchi, Ryutaro, Mimori, Koshi, Miyano, Satoru, Shimamura, Teppei
Published in PLoS computational biology (01.05.2017)
Published in PLoS computational biology (01.05.2017)
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Journal Article
Personalized Management of Pancreatic Ductal Adenocarcinoma Patients through Computational Modeling
Yamamoto, Kimiyo N, Yachida, Shinichi, Nakamura, Akira, Niida, Atsushi, Oshima, Minoru, De, Subhajyoti, Rosati, Lauren M, Herman, Joseph M, Iacobuzio-Donahue, Christine A, Haeno, Hiroshi
Published in Cancer research (Chicago, Ill.) (15.06.2017)
Published in Cancer research (Chicago, Ill.) (15.06.2017)
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Journal Article
DKK1, a negative regulator of Wnt signaling, is a target of the β-catenin/TCF pathway
NIIDA, Atsushi, HIROKO, Takatoshi, KASAI, Mana, FURUKAWA, Yoichi, NAKAMURA, Yusuke, SUZUKI, Yutaka, SUGANO, Sumio, AKIYAMA, Tetsu
Published in Oncogene (04.11.2004)
Published in Oncogene (04.11.2004)
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