Programmable Inhibition and Detection of RNA Viruses Using Cas13
Freije, Catherine A., Myhrvold, Cameron, Boehm, Chloe K., Lin, Aaron E., Welch, Nicole L., Carter, Amber, Metsky, Hayden C., Luo, Cynthia Y., Abudayyeh, Omar O., Gootenberg, Jonathan S., Yozwiak, Nathan L., Zhang, Feng, Sabeti, Pardis C.
Published in Molecular cell (05.12.2019)
Published in Molecular cell (05.12.2019)
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Journal Article
Discovery of several thousand highly diverse circular DNA viruses
Tisza, Michael J, Pastrana, Diana V, Welch, Nicole L, Stewart, Brittany, Peretti, Alberto, Starrett, Gabriel J, Pang, Yuk-Ying S, Krishnamurthy, Siddharth R, Pesavento, Patricia A, McDermott, David H, Murphy, Philip M, Whited, Jessica L, Miller, Bess, Brenchley, Jason, Rosshart, Stephan P, Rehermann, Barbara, Doorbar, John, Ta'ala, Blake A, Pletnikova, Olga, Troncoso, Juan C, Resnick, Susan M, Bolduc, Ben, Sullivan, Matthew B, Varsani, Arvind, Segall, Anca M, Buck, Christopher B
Published in eLife (04.02.2020)
Published in eLife (04.02.2020)
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Journal Article
CRISPR-Cas-amplified urinary biomarkers for multiplexed and portable cancer diagnostics
Hao, Liangliang, Zhao, Renee T., Welch, Nicole L., Tan, Edward Kah Wei, Zhong, Qian, Harzallah, Nour Saida, Ngambenjawong, Chayanon, Ko, Henry, Fleming, Heather E., Sabeti, Pardis C., Bhatia, Sangeeta N.
Published in Nature nanotechnology (01.07.2023)
Published in Nature nanotechnology (01.07.2023)
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Journal Article
Designing sensitive viral diagnostics with machine learning
Metsky, Hayden C., Welch, Nicole L., Pillai, Priya P., Haradhvala, Nicholas J., Rumker, Laurie, Mantena, Sreekar, Zhang, Yibin B., Yang, David K., Ackerman, Cheri M., Weller, Juliane, Blainey, Paul C., Myhrvold, Cameron, Mitzenmacher, Michael, Sabeti, Pardis C.
Published in Nature biotechnology (01.07.2022)
Published in Nature biotechnology (01.07.2022)
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Journal Article
Model-directed generation of artificial CRISPR-Cas13a guide RNA sequences improves nucleic acid detection
Mantena, Sreekar, Pillai, Priya P, Petros, Brittany A, Welch, Nicole L, Myhrvold, Cameron, Sabeti, Pardis C, Metsky, Hayden C
Published in Nature biotechnology (11.10.2024)
Published in Nature biotechnology (11.10.2024)
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Journal Article
Challenges in and Opportunities for Electronic Health Record-Based Data Analysis and Interpretation
Kim, Michelle Kang, Rouphael, Carol, McMichael, John, Welch, Nicole, Dasarathy, Srinivasan
Published in Gut and liver (01.03.2024)
Published in Gut and liver (01.03.2024)
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Journal Article
Indicators of thermal alteration in US waters reveal patterns of climate risk at the energy-water nexus
Jager, Henriette I., Manning, Karessa, Nicole Welch, Jessica, Corsi, Fabio, Miara, Ariel, Yoon, Hyun Seok, McManamay, Ryan A., Kao, Shih-Chieh, Kusnierz, Paul C., Gangrade, Sudershan
Published in Ecological indicators (01.02.2024)
Published in Ecological indicators (01.02.2024)
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Journal Article
Compound Sarcopenia in Hospitalized Patients with Cirrhosis Worsens Outcomes with Increasing Age
Welch, Nicole, Attaway, Amy, Bellar, Annette, Alkhafaji, Hayder, Vural, Adil, Dasarathy, Srinivasan
Published in Nutrients (01.02.2021)
Published in Nutrients (01.02.2021)
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Journal Article
Early Introduction and Rise of the Omicron Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variant in Highly Vaccinated University Populations
Petros, Brittany A, Turcinovic, Jacquelyn, Welch, Nicole L, White, Laura F, Kolaczyk, Eric D, Bauer, Matthew R, Cleary, Michael, Dobbins, Sabrina T, Doucette-Stamm, Lynn, Gore, Mitch, Nair, Parvathy, Nguyen, Tien G, Rose, Scott, Taylor, Bradford P, Tsang, Daniel, Wendlandt, Erik, Hope, Michele, Platt, Judy T, Jacobson, Karen R, Bouton, Tara, Yune, Seyho, Auclair, Jared R, Landaverde, Lena, Klapperich, Catherine M, Hamer, Davidson H, Hanage, William P, MacInnis, Bronwyn L, Sabeti, Pardis C, Connor, John H, Springer, Michael
Published in Clinical infectious diseases (08.02.2023)
Published in Clinical infectious diseases (08.02.2023)
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Journal Article
Simplified Cas13-based assays for the fast identification of SARS-CoV-2 and its variants
Arizti-Sanz, Jon, Bradley, A’Doriann, Zhang, Yibin B., Boehm, Chloe K., Freije, Catherine A., Grunberg, Michelle E., Kosoko-Thoroddsen, Tinna-Solveig F., Welch, Nicole L., Pillai, Priya P., Mantena, Sreekar, Kim, Gaeun, Uwanibe, Jessica N., John, Oluwagboadurami G., Eromon, Philomena E., Kocher, Gregory, Gross, Robin, Lee, Justin S., Hensley, Lisa E., MacInnis, Bronwyn L., Johnson, Jeremy, Springer, Michael, Happi, Christian T., Sabeti, Pardis C., Myhrvold, Cameron
Published in Nature biomedical engineering (01.08.2022)
Published in Nature biomedical engineering (01.08.2022)
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Journal Article
Acute skeletal muscle loss in SARS‐CoV‐2 infection contributes to poor clinical outcomes in COVID‐19 patients
Attaway, Amy, Welch, Nicole, Dasarathy, Dhweeja, Amaya‐Hughley, Jocelyn, Bellar, Annette, Biehl, Michelle, Dugar, Siddharth, Engelen, Marielle P.K.J., Zein, Joe, Dasarathy, Srinivasan
Published in Journal of cachexia, sarcopenia and muscle (01.10.2022)
Published in Journal of cachexia, sarcopenia and muscle (01.10.2022)
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Journal Article
Multiomics-Identified Intervention to Restore Ethanol-Induced Dysregulated Proteostasis and Secondary Sarcopenia in Alcoholic Liver Disease
Singh, Shashi Shekhar, Kumar, Avinash, Welch, Nicole, Sekar, Jinendiran, Mishra, Saurabh, Bellar, Annette, Gangadhariah, Mahesha, Attaway, Amy, Al Khafaji, Hayder, Wu, Xiaoqin, Pathak, Vai, Agrawal, Vandana, McMullen, Megan R, Hornberger, Troy A, Nagy, Laura E, Davuluri, Gangarao, Dasarathy, Srinivasan
Published in Cellular physiology and biochemistry (06.02.2021)
Published in Cellular physiology and biochemistry (06.02.2021)
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Journal Article
Author Correction: Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants
Welch, Nicole L., Zhu, Meilin, Hua, Catherine, Weller, Juliane, Mirhashemi, Marzieh Ezzaty, Nguyen, Tien G., Mantena, Sreekar, Bauer, Matthew R., Shaw, Bennett M., Ackerman, Cheri M., Thakku, Sri Gowtham, Tse, Megan W., Kehe, Jared, Uwera, Marie-Martine, Eversley, Jacqueline S., Bielwaski, Derek A., McGrath, Graham, Braidt, Joseph, Johnson, Jeremy, Cerrato, Felecia, Moreno, Gage K., Krasilnikova, Lydia A., Petros, Brittany A., Gionet, Gabrielle L., King, Ewa, Huard, Richard C., Jalbert, Samantha K., Cleary, Michael L., Fitzgerald, Nicholas A., Gabriel, Stacey B., Gallagher, Glen R., Smole, Sandra C., Madoff, Lawrence C., Brown, Catherine M., Keller, Matthew W., Wilson, Malania M., Kirby, Marie K., Barnes, John R., Park, Daniel J., Siddle, Katherine J., Happi, Christian T., Hung, Deborah T., Springer, Michael, MacInnis, Bronwyn L., Lemieux, Jacob E., Rosenberg, Eric, Branda, John A., Blainey, Paul C., Sabeti, Pardis C., Myhrvold, Cameron
Published in Nature medicine (2024)
Published in Nature medicine (2024)
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Journal Article
Metagenomic Discovery of 83 New Human Papillomavirus Types in Patients with Immunodeficiency
Pastrana, Diana V, Peretti, Alberto, Welch, Nicole L, Borgogna, Cinzia, Olivero, Carlotta, Badolato, Raffaele, Notarangelo, Lucia D, Gariglio, Marisa, FitzGerald, Peter C, McIntosh, Carl E, Reeves, Jesse, Starrett, Gabriel J, Bliskovsky, Valery, Velez, Daniel, Brownell, Isaac, Yarchoan, Robert, Wyvill, Kathleen M, Uldrick, Thomas S, Maldarelli, Frank, Lisco, Andrea, Sereti, Irini, Gonzalez, Christopher M, Androphy, Elliot J, McBride, Alison A, Van Doorslaer, Koenraad, Garcia, Francisco, Dvoretzky, Israel, Liu, Joceline S, Han, Justin, Murphy, Philip M, McDermott, David H, Buck, Christopher B
Published in mSphere (12.12.2018)
Published in mSphere (12.12.2018)
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