Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain
Perrin, Amandine, Larsonneur, Elise, Nicholson, Ainsley C., Edwards, David J., Gundlach, Kristin M., Whitney, Anne M., Gulvik, Christopher A., Bell, Melissa E., Rendueles, Olaya, Cury, Jean, Hugon, Perrine, Clermont, Dominique, Enouf, Vincent, Loparev, Vladimir, Juieng, Phalasy, Monson, Timothy, Warshauer, David, Elbadawi, Lina I., Walters, Maroya Spalding, Crist, Matthew B., Noble-Wang, Judith, Borlaug, Gwen, Rocha, Eduardo P. C., Criscuolo, Alexis, Touchon, Marie, Davis, Jeffrey P., Holt, Kathryn E., McQuiston, John R., Brisse, Sylvain
Published in Nature communications (24.05.2017)
Published in Nature communications (24.05.2017)
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Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas , eleven species to the genus Kaistella , and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens
Nicholson, Ainsley C, Gulvik, Christopher A, Whitney, Anne M, Humrighouse, Ben W, Bell, Melissa E, Holmes, Barry, Steigerwalt, Arnie G, Villarma, Aaron, Sheth, Mili, Batra, Dhwani, Rowe, Lori A, Burroughs, Mark, Pryor, Jessica C, Bernardet, Jean-François, Hugo, Celia, Kämpfer, Peter, Newman, Jeffrey D, McQuiston, John R
Published in International journal of systematic and evolutionary microbiology (01.08.2020)
Published in International journal of systematic and evolutionary microbiology (01.08.2020)
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Neural network based integration of assays to assess pathogenic potential
Eslami, Mohammed, Chen, Yi-Pei, Nicholson, Ainsley C., Weston, Mark, Bell, Melissa, McQuiston, John R., Samuel, James, van Schaik, Erin J., de Figueiredo, Paul
Published in Scientific reports (13.04.2023)
Published in Scientific reports (13.04.2023)
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Revisiting the taxonomy of the genus Elizabethkingia using whole-genome sequencing, optical mapping, and MALDI-TOF, along with proposal of three novel Elizabethkingia species: Elizabethkingia bruuniana sp. nov., Elizabethkingia ursingii sp. nov., and Elizabethkingia occulta sp. nov
Nicholson, Ainsley C., Gulvik, Christopher A., Whitney, Anne M., Humrighouse, Ben W., Graziano, James, Emery, Brian, Bell, Melissa, Loparev, Vladimir, Juieng, Phalasy, Gartin, Jarrett, Bizet, Chantal, Clermont, Dominique, Criscuolo, Alexis, Brisse, Sylvain, McQuiston, John R.
Published in Antonie van Leeuwenhoek (2018)
Published in Antonie van Leeuwenhoek (2018)
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The draft genomes of Elizabethkingia anophelis of equine origin are genetically similar to three isolates from human clinical specimens
Johnson, William L, Ramachandran, Akhilesh, Torres, Nathanial J, Nicholson, Ainsley C, Whitney, Anne M, Bell, Melissa, Villarma, Aaron, Humrighouse, Ben W, Sheth, Mili, Dowd, Scot E, McQuiston, John R, Gustafson, John E
Published in PloS one (19.07.2018)
Published in PloS one (19.07.2018)
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Emergence of Resistance among USA300 Methicillin-Resistant Staphylococcus aureus Isolates Causing Invasive Disease in the United States
McDougal, Linda K, Fosheim, Gregory E, Nicholson, Ainsley, Bulens, Sandra N, Limbago, Brandi M, Shearer, Julia E S, Summers, Anne O, Patel, Jean B
Published in Antimicrobial Agents and Chemotherapy (01.09.2010)
Published in Antimicrobial Agents and Chemotherapy (01.09.2010)
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A Real-Time Multiplex PCR Assay for Detection of Elizabethkingia Species and Differentiation between Elizabethkingia anophelis and E. meningoseptica
Kelly, Aubree J, Karpathy, Sandor E, Gulvik, Christopher A, Ivey, Melissa L, Whitney, Anne M, Bell, Melissa E, Nicholson, Ainsley C, Humrighouse, Ben W, McQuiston, John R
Published in Journal of clinical microbiology (01.04.2019)
Published in Journal of clinical microbiology (01.04.2019)
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Journal Article
A Genetic Locus in Elizabethkingia anophelis Associated with Elevated Vancomycin Resistance and Multiple Antibiotic Reduced Susceptibility
Johnson, William L, Gupta, Sushim Kumar, Maharjan, Suman, Morgenstein, Randy M, Nicholson, Ainsley C, McQuiston, John R, Gustafson, John E
Published in Antibiotics (Basel) (01.01.2024)
Published in Antibiotics (Basel) (01.01.2024)
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Identification of a novel small-molecule inhibitor of the hypoxia-inducible factor 1 pathway
TAN, Chalet, DE NORONHA, Rita G, WEI ZHOU, OLSON, Jeffrey J, PEREIRA, M. Manuela, NICOLAOU, K. C, VAN MEIR, Erwin G, ROECKER, Anthony J, PYRZYNSKA, Beata, KHWAJA, Fatima, ZHAOBIN ZHANG, HUANCHUN ZHANG, QUINCY TENG, NICHOLSON, Ainsley C, GIANNAKAKOU, Paraskevi
Published in Cancer research (Chicago, Ill.) (15.01.2005)
Published in Cancer research (Chicago, Ill.) (15.01.2005)
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Scardovia wiggsiae sp. nov., isolated from the human oral cavity and clinical material, and emended descriptions of the genus Scardovia and Scardovia inopinata
Downes, Julia, Mantzourani, Maria, Beighton, David, Hooper, Samuel, Wilson, Melanie J, Nicholson, Ainsley, Wade, William G
Published in International journal of systematic and evolutionary microbiology (01.01.2011)
Published in International journal of systematic and evolutionary microbiology (01.01.2011)
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Correction for Shewmaker et al., Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E. thailandicus Is a Senior Subjective Synonym of "E. sanguinicola" and Confirmation of E. caccae as a Species Distinct from E. silesiacus
Shewmaker, Patricia Lynn, Steigerwalt, Arnold G, Nicholson, Ainsley C, Carvalho, Maria da Glória S, Facklam, Richard R, Whitney, Anne M, Teixeira, Lúcia M
Published in Journal of clinical microbiology (01.01.2017)
Published in Journal of clinical microbiology (01.01.2017)
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Microarray Identification of Clostridium difficile Core Components and Divergent Regions Associated with Host Origin
JANVILISRI, Tavan, SCARIA, Joy, THOMPSON, Angela D, NICHOLSON, Ainsley, LIMBAGO, Brandi M, ARROYO, Luis G, SONGER, J. Glenn, GRÖHN, Yrjö T, CHANG, Yung-Fu
Published in Journal of Bacteriology (01.06.2009)
Published in Journal of Bacteriology (01.06.2009)
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Nocardia amikacinitolerans sp. nov., an amikacin-resistant human pathogen
Ezeoke, Ifeoma, Klenk, Hans-Peter, Pötter, Gabriele, Schumann, Peter, Moser, Ben D, Lasker, Brent A, Nicholson, Ainsley, Brown, June M
Published in International journal of systematic and evolutionary microbiology (01.03.2013)
Published in International journal of systematic and evolutionary microbiology (01.03.2013)
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Complete Genome Sequences for Two Strains of a Novel Fastidious, Partially Acid-Fast, Gram-Positive Corynebacterineae Bacterium, Derived from Human Clinical Samples
Nicholson, Ainsley C, Bell, Melissa, Humrighouse, Ben W, McQuiston, John R
Published in Genome announcements (Washington, DC) (10.12.2015)
Published in Genome announcements (Washington, DC) (10.12.2015)
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Journal Article
Draft Genome Sequences of Strains Representing Each of the Elizabethkingia Genomospecies Previously Determined by DNA-DNA Hybridization
Nicholson, Ainsley C, Humrighouse, Ben W, Graziano, James C, Emery, Brian, McQuiston, John R
Published in Genome announcements (Washington, DC) (10.03.2016)
Published in Genome announcements (Washington, DC) (10.03.2016)
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Journal Article
Twelve Complete Reference Genomes of Clinical Isolates in the Capnocytophaga Genus
Villarma, Aaron, Gulvik, Christopher A, Rowe, Lori A, Sheth, Mili, Juieng, Phalasy, Nicholson, Ainsley C, Loparev, Vladimir N, McQuiston, John R
Published in Genome announcements (Washington, DC) (02.11.2017)
Published in Genome announcements (Washington, DC) (02.11.2017)
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Journal Article
Reevaluation of the Taxonomic Status of Recently Described Species of Enterococcus: Evidence that E. thailandicus Is a Senior Subjective Synonym of “E. sanguinicola” and Confirmation of E. caccae as a Species Distinct from E. silesiacus
LYNN SHEWMAKER, Patricia, STEIGERWALT, Arnold G, NICHOLSON, Ainsley C, CARVALHO, Maria Da Glória S, FACKLAM, Richard R, WHITEY, Anne M, TEIXEIRA, Lucia M
Published in Journal of Clinical Microbiology (01.07.2011)
Published in Journal of Clinical Microbiology (01.07.2011)
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