Dysregulation in Akt/mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells
Appelberg, Sofia, Gupta, Soham, Svensson Akusjärvi, Sara, Ambikan, Anoop T., Mikaeloff, Flora, Saccon, Elisa, Végvári, Ákos, Benfeitas, Rui, Sperk, Maike, Ståhlberg, Marie, Krishnan, Shuba, Singh, Kamal, Penninger, Josef M., Mirazimi, Ali, Neogi, Ujjwal
Published in Emerging microbes & infections (01.01.2020)
Published in Emerging microbes & infections (01.01.2020)
Get full text
Journal Article
Richer gut microbiota with distinct metabolic profile in HIV infected Elite Controllers
Vesterbacka, Jan, Rivera, Javier, Noyan, Kajsa, Parera, Mariona, Neogi, Ujjwal, Calle, Malu, Paredes, Roger, Sönnerborg, Anders, Noguera-Julian, Marc, Nowak, Piotr
Published in Scientific reports (24.07.2017)
Published in Scientific reports (24.07.2017)
Get full text
Journal Article
Nucleoside-Modified mRNA Vaccines Protect IFNAR -/- Mice against Crimean-Congo Hemorrhagic Fever Virus Infection
Appelberg, Sofia, John, Lijo, Pardi, Norbert, Végvári, Ákos, Bereczky, Sándor, Ahlén, Gustaf, Monteil, Vanessa, Abdurahman, Samir, Mikaeloff, Flora, Beattie, Mitchell, Tam, Ying, Sällberg, Matti, Neogi, Ujjwal, Weissman, Drew, Mirazimi, Ali
Published in Journal of virology (09.02.2022)
Published in Journal of virology (09.02.2022)
Get full text
Journal Article
Utility of Proteomics in Emerging and Re-Emerging Infectious Diseases Caused by RNA Viruses
Sperk, Maike, van Domselaar, Robert, Rodriguez, Jimmy Esneider, Mikaeloff, Flora, Sá Vinhas, Beatriz, Saccon, Elisa, Sönnerborg, Anders, Singh, Kamal, Gupta, Soham, Végvári, Ákos, Neogi, Ujjwal
Published in Journal of proteome research (06.11.2020)
Published in Journal of proteome research (06.11.2020)
Get full text
Journal Article
Temporal cytokine storm dynamics in dengue infection predicts severity
Bhatt, Puneet, Varma, Muralidhar, Sood, Vikas, Ambikan, Anoop, Jayaram, Anup, Babu, Naren, Gupta, Soham, Mukhopadhyay, Chiranjay, Neogi, Ujjwal
Published in Virus research (01.03.2024)
Published in Virus research (01.03.2024)
Get full text
Journal Article
Systemic Inflammation and the Increased Risk of Inflamm-Aging and Age-Associated Diseases in People Living With HIV on Long Term Suppressive Antiretroviral Therapy
Babu, Hemalatha, Ambikan, Anoop T, Gabriel, Erin E, Svensson Akusjärvi, Sara, Palaniappan, Alangudi Natarajan, Sundaraj, Vijila, Mupanni, Naveen Reddy, Sperk, Maike, Cheedarla, Narayanaiah, Sridhar, Rathinam, Tripathy, Srikanth P, Nowak, Piotr, Hanna, Luke Elizabeth, Neogi, Ujjwal
Published in Frontiers in immunology (2019)
Published in Frontiers in immunology (2019)
Get full text
Journal Article
Pretreatment drug resistance in a large countrywide Ethiopian HIV-1C cohort: a comparison of Sanger and high-throughput sequencing
Telele, Nigus Fikrie, Kalu, Amare Worku, Gebre-Selassie, Solomon, Fekade, Daniel, Abdurahman, Samir, Marrone, Gaetano, Neogi, Ujjwal, Tegbaru, Belete, Sönnerborg, Anders
Published in Scientific reports (15.05.2018)
Published in Scientific reports (15.05.2018)
Get full text
Journal Article
Parechovirus infection in human brain organoids: host innate inflammatory response and not neuro-infectivity correlates to neurologic disease
Capendale, Pamela E., García-Rodríguez, Inés, Ambikan, Anoop T., Mulder, Lance A., Depla, Josse A., Freeze, Eline, Koen, Gerrit, Calitz, Carlemi, Sood, Vikas, Vieira de Sá, Renata, Neogi, Ujjwal, Pajkrt, Dasja, Sridhar, Adithya, Wolthers, Katja C.
Published in Nature communications (21.03.2024)
Published in Nature communications (21.03.2024)
Get full text
Journal Article
Type-I interferon signatures in SARS-CoV-2 infected Huh7 cells
Chen, Xi, Saccon, Elisa, Appelberg, K. Sofia, Mikaeloff, Flora, Rodriguez, Jimmy Esneider, Vinhas, Beatriz Sá, Frisan, Teresa, Végvári, Ákos, Mirazimi, Ali, Neogi, Ujjwal, Gupta, Soham
Published in Cell death discovery (18.05.2021)
Published in Cell death discovery (18.05.2021)
Get full text
Journal Article
Composition of subgingival microbiota associated with periodontitis and diagnosis of malignancy-a cross-sectional study
Narayanan, Aswathy, Söder, Birgitta, Meurman, Jukka, Lundmark, Anna, Hu, Yue O O, Neogi, Ujjwal, Yucel-Lindberg, Tülay
Published in Frontiers in microbiology (2023)
Published in Frontiers in microbiology (2023)
Get full text
Journal Article
A high-risk gut microbiota configuration associates with fatal hyperinflammatory immune and metabolic responses to SARS-CoV-2
Albrich, Werner C., Ghosh, Tarini Shankar, Ahearn-Ford, Sinead, Mikaeloff, Flora, Lunjani, Nonhlanhla, Forde, Brian, Suh, Noémie, Kleger, Gian-Reto, Pietsch, Urs, Frischknecht, Manuel, Garzoni, Christian, Forlenza, Rossella, Horgan, Mary, Sadlier, Corinna, Negro, Tommaso Rochat, Pugin, Jérôme, Wozniak, Hannah, Cerny, Andreas, Neogi, Ujjwal, O'Toole, Paul W., O'Mahony, Liam
Published in Gut microbes (2022)
Published in Gut microbes (2022)
Get full text
Journal Article
Integrative Lipidomics and Metabolomics for System-Level Understanding of the Metabolic Syndrome in Long-Term Treated HIV-Infected Individuals
Olund Villumsen, Sofie, Benfeitas, Rui, Knudsen, Andreas Dehlbæk, Gelpi, Marco, Høgh, Julie, Thomsen, Magda Teresa, Murray, Daniel, Ullum, Henrik, Neogi, Ujjwal, Nielsen, Susanne Dam
Published in Frontiers in immunology (12.01.2022)
Published in Frontiers in immunology (12.01.2022)
Get full text
Journal Article
Publisher Correction: In vitro replicative fitness of early Transmitted founder HIV-1 variants and sensitivity to Interferon alpha
Ashokkumar, Manickam, Sonawane, Aanand, Sperk, Maike, Tripathy, Srikanth P., Neogi, Ujjwal, Hanna, Luke Elizabeth
Published in Scientific reports (10.08.2020)
Published in Scientific reports (10.08.2020)
Get full text
Journal Article
Drug Resistance Mutations Against Protease, Reverse Transcriptase and Integrase Inhibitors in People Living With HIV-1 Receiving Boosted Protease Inhibitors in South Africa
Obasa, Adetayo Emmanuel, Mikasi, Sello Given, Brado, Dominik, Cloete, Ruben, Singh, Kamlendra, Neogi, Ujjwal, Jacobs, Graeme Brendon
Published in Frontiers in microbiology (20.03.2020)
Published in Frontiers in microbiology (20.03.2020)
Get full text
Journal Article