TractSeg - Fast and accurate white matter tract segmentation
Wasserthal, Jakob, Neher, Peter, Maier-Hein, Klaus H.
Published in NeuroImage (Orlando, Fla.) (01.12.2018)
Published in NeuroImage (Orlando, Fla.) (01.12.2018)
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Journal Article
Combined tract segmentation and orientation mapping for bundle-specific tractography
Wasserthal, Jakob, Neher, Peter F., Hirjak, Dusan, Maier-Hein, Klaus H.
Published in Medical image analysis (01.12.2019)
Published in Medical image analysis (01.12.2019)
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Journal Article
Why rankings of biomedical image analysis competitions should be interpreted with care
Maier-Hein, Lena, Eisenmann, Matthias, Reinke, Annika, Onogur, Sinan, Stankovic, Marko, Scholz, Patrick, Arbel, Tal, Bogunovic, Hrvoje, Bradley, Andrew P., Carass, Aaron, Feldmann, Carolin, Frangi, Alejandro F., Full, Peter M., van Ginneken, Bram, Hanbury, Allan, Honauer, Katrin, Kozubek, Michal, Landman, Bennett A., März, Keno, Maier, Oskar, Maier-Hein, Klaus, Menze, Bjoern H., Müller, Henning, Neher, Peter F., Niessen, Wiro, Rajpoot, Nasir, Sharp, Gregory C., Sirinukunwattana, Korsuk, Speidel, Stefanie, Stock, Christian, Stoyanov, Danail, Taha, Abdel Aziz, van der Sommen, Fons, Wang, Ching-Wei, Weber, Marc-André, Zheng, Guoyan, Jannin, Pierre, Kopp-Schneider, Annette
Published in Nature communications (06.12.2018)
Published in Nature communications (06.12.2018)
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Journal Article
Physical and digital phantoms for validating tractography and assessing artifacts
Drobnjak, Ivana, Neher, Peter, Poupon, Cyril, Sarwar, Tabinda
Published in NeuroImage (Orlando, Fla.) (15.12.2021)
Published in NeuroImage (Orlando, Fla.) (15.12.2021)
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Journal Article
Fiberfox: Facilitating the creation of realistic white matter software phantoms
Neher, Peter F., Laun, Frederik B., Stieltjes, Bram, Maier-Hein, Klaus H.
Published in Magnetic resonance in medicine (01.11.2014)
Published in Magnetic resonance in medicine (01.11.2014)
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Journal Article
Multiparametric mapping of white matter microstructure in catatonia
Wasserthal, Jakob, Maier-Hein, Klaus H, Neher, Peter F, Northoff, Georg, Kubera, Katharina M, Fritze, Stefan, Harneit, Anais, Geiger, Lena S, Tost, Heike, Wolf, Robert C, Hirjak, Dusan
Published in Neuropsychopharmacology (New York, N.Y.) (01.09.2020)
Published in Neuropsychopharmacology (New York, N.Y.) (01.09.2020)
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Journal Article
Limits to anatomical accuracy of diffusion tractography using modern approaches
Schilling, Kurt G., Nath, Vishwesh, Hansen, Colin, Parvathaneni, Prasanna, Blaber, Justin, Gao, Yurui, Neher, Peter, Aydogan, Dogu Baran, Shi, Yonggang, Ocampo-Pineda, Mario, Schiavi, Simona, Daducci, Alessandro, Girard, Gabriel, Barakovic, Muhamed, Rafael-Patino, Jonathan, Romascano, David, Rensonnet, Gaëtan, Pizzolato, Marco, Bates, Alice, Fischi, Elda, Thiran, Jean-Philippe, Canales-Rodríguez, Erick J., Huang, Chao, Zhu, Hongtu, Zhong, Liming, Cabeen, Ryan, Toga, Arthur W., Rheault, Francois, Theaud, Guillaume, Houde, Jean-Christophe, Sidhu, Jasmeen, Chamberland, Maxime, Westin, Carl-Fredrik, Dyrby, Tim B., Verma, Ragini, Rathi, Yogesh, Irfanoglu, M. Okan, Thomas, Cibu, Pierpaoli, Carlo, Descoteaux, Maxime, Anderson, Adam W., Landman, Bennett A.
Published in NeuroImage (Orlando, Fla.) (15.01.2019)
Published in NeuroImage (Orlando, Fla.) (15.01.2019)
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Journal Article
Microstructural white matter biomarkers of symptom severity and therapy outcome in catatonia: Rationale, study design and preliminary clinical data of the whiteCAT study
Hirjak, Dusan, Brandt, Geva A, Peretzke, Robin, Fritze, Stefan, Meyer-Lindenberg, Andreas, Maier-Hein, Klaus H, Neher, Peter F
Published in Schizophrenia research (01.01.2024)
Published in Schizophrenia research (01.01.2024)
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Journal Article
Strengths and weaknesses of state of the art fiber tractography pipelines – A comprehensive in-vivo and phantom evaluation study using Tractometer
Neher, Peter F., Descoteaux, Maxime, Houde, Jean-Christophe, Stieltjes, Bram, Maier-Hein, Klaus H.
Published in Medical image analysis (01.12.2015)
Published in Medical image analysis (01.12.2015)
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Journal Article
The potential of federated learning for self-configuring medical object detection in heterogeneous data distributions
Rashidi, Gabriel, Bounias, Dimitrios, Bujotzek, Markus, Mora, Andrés Martínez, Neher, Peter, Maier-Hein, Klaus H.
Published in Scientific reports (11.10.2024)
Published in Scientific reports (11.10.2024)
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Journal Article
Fiber tractography using machine learning
Neher, Peter F., Côté, Marc-Alexandre, Houde, Jean-Christophe, Descoteaux, Maxime, Maier-Hein, Klaus H.
Published in NeuroImage (Orlando, Fla.) (01.09.2017)
Published in NeuroImage (Orlando, Fla.) (01.09.2017)
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Journal Article
Reproducible Radiomics Features from Multi-MRI-Scanner Test-Retest-Study: Influence on Performance and Generalizability of Models
Wennmann, Markus, Rotkopf, Lukas T, Bauer, Fabian, Hielscher, Thomas, Kächele, Jessica, Mai, Elias K, Weinhold, Niels, Raab, Marc-Steffen, Goldschmidt, Hartmut, Weber, Tim F, Schlemmer, Heinz-Peter, Delorme, Stefan, Maier-Hein, Klaus, Neher, Peter
Published in Journal of magnetic resonance imaging (11.05.2024)
Published in Journal of magnetic resonance imaging (11.05.2024)
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Journal Article
The DTI Challenge: Toward Standardized Evaluation of Diffusion Tensor Imaging Tractography for Neurosurgery
Pujol, Sonia, Wells, William, Pierpaoli, Carlo, Brun, Caroline, Gee, James, Cheng, Guang, Vemuri, Baba, Commowick, Olivier, Prima, Sylvain, Stamm, Aymeric, Goubran, Maged, Khan, Ali, Peters, Terry, Neher, Peter, Maier-Hein, Klaus H, Shi, Yundi, Tristan-Vega, Antonio, Veni, Gopalkrishna, Whitaker, Ross, Styner, Martin, Westin, Carl-Fredrik, Gouttard, Sylvain, Norton, Isaiah, Chauvin, Laurent, Mamata, Hatsuho, Gerig, Guido, Nabavi, Arya, Golby, Alexandra, Kikinis, Ron
Published in Journal of neuroimaging (01.11.2015)
Published in Journal of neuroimaging (01.11.2015)
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Journal Article
Deep intravital brain tumor imaging enabled by tailored three-photon microscopy and analysis
Schubert, Marc Cicero, Soyka, Stella Judith, Tamimi, Amr, Maus, Emanuel, Schroers, Julian, Wißmann, Niklas, Reyhan, Ekin, Tetzlaff, Svenja Kristin, Yang, Yvonne, Denninger, Robert, Peretzke, Robin, Beretta, Carlo, Drumm, Michael, Heuer, Alina, Buchert, Verena, Steffens, Alicia, Walshon, Jordain, McCortney, Kathleen, Heiland, Sabine, Bendszus, Martin, Neher, Peter, Golebiewska, Anna, Wick, Wolfgang, Winkler, Frank, Breckwoldt, Michael O., Kreshuk, Anna, Kuner, Thomas, Horbinski, Craig, Kurz, Felix Tobias, Prevedel, Robert, Venkataramani, Varun
Published in Nature communications (10.09.2024)
Published in Nature communications (10.09.2024)
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Journal Article
White matter microstructure alterations in cortico-striatal networks are associated with parkinsonism in schizophrenia spectrum disorders
Wasserthal, Jakob, Maier-Hein, Klaus H., Neher, Peter F., Wolf, Robert C., Northoff, Georg, Waddington, John L., Kubera, Katharina M., Fritze, Stefan, Harneit, Anais, Geiger, Lena S., Tost, Heike, Hirjak, Dusan
Published in European neuropsychopharmacology (01.09.2021)
Published in European neuropsychopharmacology (01.09.2021)
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Journal Article
Q-Ball high-resolution fiber tractography: Optimizing corticospinal tract delineation near gliomas and its role in the prediction of postoperative motor deficits– A proof of concept study
Lenga, Pavlina, Scherer, Moritz, Peretzke, Robin, Neher, Peter, Jesser, Jessica, Unterberg, Andreas W., Krieg, Sandro, Becker, Daniela
Published in Brain & spine (2024)
Published in Brain & spine (2024)
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Journal Article
Deep learning aided preoperative diagnosis of primary central nervous system lymphoma
Naser, Paul Vincent, Maurer, Miriam Cindy, Fischer, Maximilian, Karimian-Jazi, Kianush, Ben-Salah, Chiraz, Bajwa, Awais Akbar, Jakobs, Martin, Jungk, Christine, Jesser, Jessica, Bendszus, Martin, Maier-Hein, Klaus, Krieg, Sandro M., Neher, Peter, Neumann, Jan-Oliver
Published in iScience (16.02.2024)
Published in iScience (16.02.2024)
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Journal Article
Author Correction: The challenge of mapping the human connectome based on diffusion tractography
Maier-Hein, Klaus H., Neher, Peter F., Houde, Jean-Christophe, Côté, Marc-Alexandre, Garyfallidis, Eleftherios, Zhong, Jidan, Chamberland, Maxime, Yeh, Fang-Cheng, Lin, Ying-Chia, Ji, Qing, Reddick, Wilburn E., Glass, John O., Chen, David Qixiang, Feng, Yuanjing, Gao, Chengfeng, Wu, Ye, Ma, Jieyan, He, Renjie, Li, Qiang, Westin, Carl-Fredrik, Deslauriers-Gauthier, Samuel, González, J. Omar Ocegueda, Paquette, Michael, St-Jean, Samuel, Girard, Gabriel, Rheault, François, Sidhu, Jasmeen, Tax, Chantal M. W., Guo, Fenghua, Mesri, Hamed Y., Dávid, Szabolcs, Froeling, Martijn, Heemskerk, Anneriet M., Leemans, Alexander, Boré, Arnaud, Pinsard, Basile, Bedetti, Christophe, Desrosiers, Matthieu, Brambati, Simona, Doyon, Julien, Sarica, Alessia, Vasta, Roberta, Cerasa, Antonio, Quattrone, Aldo, Yeatman, Jason, Khan, Ali R., Hodges, Wes, Alexander, Simon, Romascano, David, Barakovic, Muhamed, Auría, Anna, Esteban, Oscar, Lemkaddem, Alia, Thiran, Jean-Philippe, Cetingul, H. Ertan, Odry, Benjamin L., Mailhe, Boris, Nadar, Mariappan S., Pizzagalli, Fabrizio, Prasad, Gautam, Villalon-Reina, Julio E., Galvis, Justin, Thompson, Paul M., De Santiago Requejo, Francisco, Laguna, Pedro Luque, Lacerda, Luis Miguel, Barrett, Rachel, Dell’Acqua, Flavio, Catani, Marco, Petit, Laurent, Caruyer, Emmanuel, Daducci, Alessandro, Dyrby, Tim B., Holland-Letz, Tim, Hilgetag, Claus C., Stieltjes, Bram, Descoteaux, Maxime
Published in Nature communications (04.11.2019)
Published in Nature communications (04.11.2019)
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