Rapid KRAS, EGFR, BRAF and PIK3CA mutation analysis of fine needle aspirates from non-small-cell lung cancer using allele-specific qPCR
van Eijk, Ronald, Licht, Jappe, Schrumpf, Melanie, Talebian Yazdi, Mehrdad, Ruano, Dina, Forte, Giusi I, Nederlof, Petra M, Veselic, Maud, Rabe, Klaus F, Annema, Jouke T, Smit, Vincent, Morreau, Hans, van Wezel, Tom
Published in PloS one (08.03.2011)
Published in PloS one (08.03.2011)
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Genomic patterns resembling BRCA1- and BRCA2-mutated breast cancers predict benefit of intensified carboplatin-based chemotherapy
Vollebergh, Marieke A, Lips, Esther H, Nederlof, Petra M, Wessels, Lodewyk F A, Wesseling, Jelle, Vd Vijver, Marc J, de Vries, Elisabeth G E, van Tinteren, Harm, Jonkers, Jos, Hauptmann, Michael, Rodenhuis, Sjoerd, Linn, Sabine C
Published in Breast cancer research : BCR (15.05.2014)
Published in Breast cancer research : BCR (15.05.2014)
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Next generation sequencing of triple negative breast cancer to find predictors for chemotherapy response
Lips, Esther H, Michaut, Magali, Hoogstraat, Marlous, Mulder, Lennart, Besselink, Nicolle J M, Koudijs, Marco J, Cuppen, Edwin, Voest, Emile E, Bernards, Rene, Nederlof, Petra M, Wesseling, Jelle, Rodenhuis, Sjoerd, Wessels, Lodewyk F A
Published in Breast cancer research : BCR (03.10.2015)
Published in Breast cancer research : BCR (03.10.2015)
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BRCAness digitalMLPA profiling predicts benefit of intensified platinum-based chemotherapy in triple-negative and luminal-type breast cancer
Lips, Esther H, Benard-Slagter, Anne, Opdam, Mark, Scheerman, Caroline E, Wesseling, Jelle, Hogervorst, Frans B L, Linn, Sabine C, Savola, Suvi, Nederlof, Petra M
Published in Breast cancer research : BCR (25.07.2020)
Published in Breast cancer research : BCR (25.07.2020)
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Comprehensive routine diagnostic screening to identify predictive mutations, gene amplifications, and microsatellite instability in FFPE tumor material
Steeghs, Elisabeth M P, Kroeze, Leonie I, Tops, Bastiaan B J, van Kempen, Leon C, Ter Elst, Arja, Kastner-van Raaij, Annemiek W M, Hendriks-Cornelissen, Sandra J B, Hermsen, Mandy J W, Jansen, Erik A M, Nederlof, Petra M, Schuuring, Ed, Ligtenberg, Marjolijn J L, Eijkelenboom, Astrid
Published in BMC cancer (07.04.2020)
Published in BMC cancer (07.04.2020)
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Long-term outcomes of young, node-negative, chemotherapy-naïve, triple-negative breast cancer patients according to BRCA1 status
Wang, Yuwei, Dackus, Gwen M H E, Rosenberg, Efraim H, Cornelissen, Sten, de Boo, Leonora W, Broeks, Annegien, Brugman, Wim, Chan, Terry W S, van Diest, Paul J, Hauptmann, Michael, Ter Hoeve, Natalie D, Isaeva, Olga I, de Jong, Vincent M T, Jóźwiak, Katarzyna, Kluin, Roelof J C, Kok, Marleen, Koop, Esther, Nederlof, Petra M, Opdam, Mark, Schouten, Philip C, Siesling, Sabine, van Steenis, Charlaine, Voogd, Adri C, Vreuls, Willem, Salgado, Roberto F, Linn, Sabine C, Schmidt, Marjanka K
Published in BMC medicine (09.01.2024)
Published in BMC medicine (09.01.2024)
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BRCA1 -Mutated Estrogen Receptor-Positive Breast Cancer Shows BRCAness, Suggesting Sensitivity to Drugs Targeting Homologous Recombination Deficiency
Lips, Esther H, Debipersad, Rashmie D, Scheerman, Caroline E, Mulder, Lennart, Sonke, Gabe S, van der Kolk, Lizet E, Wesseling, Jelle, Hogervorst, Frans B L, Nederlof, Petra M
Published in Clinical cancer research (01.03.2017)
Published in Clinical cancer research (01.03.2017)
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Recommendations for the clinical interpretation and reporting of copy number gains using gene panel NGS analysis in routine diagnostics
Eijkelenboom, Astrid, Tops, Bastiaan B. J., van den Berg, Anke, van den Brule, Adrianus J. C., Dinjens, Winand N. M., Dubbink, Hendrikus J., ter Elst, Arja, Geurts-Giele, Willemina R. R., Groenen, Patricia J. T. A., Groenendijk, Floris H., Heideman, Daniëlle A. M., Huibers, Manon M. H., Huijsmans, Cornelis J. J., Jeuken, Judith W. M., van Kempen, Léon C., Korpershoek, Esther, Kroeze, Leonie I., de Leng, Wendy W. J., van Noesel, Carel J. M., Speel, Ernst-Jan M., Vogel, Maartje J., van Wezel, Tom, Nederlof, Petra M., Schuuring, Ed, Ligtenberg, Marjolijn J. L.
Published in Virchows Archiv : an international journal of pathology (01.06.2019)
Published in Virchows Archiv : an international journal of pathology (01.06.2019)
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Analysis of PALB2/FANCN-associated breast cancer families
Tischkowitz, Marc, Xia, Bing, Sabbaghian, Nelly, Reis-Filho, Jorge S, Hamel, Nancy, Li, Guilan, van Beers, Erik H, Li, Lili, Khalil, Tayma, Quenneville, Louise A, Omeroglu, Atilla, Poll, Aletta, Lepage, Pierre, Wong, Nora, Nederlof, Petra M, Ashworth, Alan, Tonin, Patricia N, Narod, Steven A, Livingston, David M, Foulkes, William D
Published in Proceedings of the National Academy of Sciences - PNAS (17.04.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (17.04.2007)
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Quantitative copy number analysis by Multiplex Ligation-dependent Probe Amplification (MLPA) of BRCA1-associated breast cancer regions identifies BRCAness
Lips, Esther H, Laddach, Nadja, Savola, Suvi P, Vollebergh, Marieke A, Oonk, Anne M M, Imholz, Alex L T, Wessels, Lodewyk F A, Wesseling, Jelle, Nederlof, Petra M, Rodenhuis, Sjoerd
Published in Breast cancer research : BCR (27.10.2011)
Published in Breast cancer research : BCR (27.10.2011)
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BRCA1-mutated and basal-like breast cancers have similar aCGH profiles and a high incidence of protein truncating TP53 mutations
Holstege, Henne, Horlings, Hugo M, Velds, Arno, Langerød, Anita, Børresen-Dale, Anne-Lise, van de Vijver, Marc J, Nederlof, Petra M, Jonkers, Jos
Published in BMC cancer (30.11.2010)
Published in BMC cancer (30.11.2010)
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Comprehensive characterization of pre- and post-treatment samples of breast cancer reveal potential mechanisms of chemotherapy resistance
Hoogstraat, Marlous, Lips, Esther H, Mayayo-Peralta, Isabel, Mulder, Lennart, Kristel, Petra, van der Heijden, Ingrid, Annunziato, Stefano, van Seijen, Maartje, Nederlof, Petra M, Sonke, Gabe S, Zwart, Wilbert, Wesseling, Jelle, Wessels, Lodewyk F A
Published in NPJ breast cancer (06.05.2022)
Published in NPJ breast cancer (06.05.2022)
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Identification of BRCA1-like triple-negative breast cancers by quantitative multiplex-ligation-dependent probe amplification (MLPA) analysis of BRCA1-associated chromosomal regions: a validation study
Gross, Eva, van Tinteren, Harm, Li, Zhou, Raab, Sandra, Meul, Christina, Avril, Stefanie, Laddach, Nadja, Aubele, Michaela, Propping, Corinna, Gkazepis, Apostolos, Schmitt, Manfred, Meindl, Alfons, Nederlof, Petra M, Kiechle, Marion, Lips, Esther H
Published in BMC cancer (19.10.2016)
Published in BMC cancer (19.10.2016)
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Genomic signature of BRCA1 deficiency in sporadic basal-like breast tumors
Joosse, Simon A., Brandwijk, Kim I. M., Mulder, Lennart, Wesseling, Jelle, Hannemann, Juliane, Nederlof, Petra M.
Published in Genes chromosomes & cancer (01.02.2011)
Published in Genes chromosomes & cancer (01.02.2011)
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Integration of DNA Copy Number Alterations and Prognostic Gene Expression Signatures in Breast Cancer Patients
Horlings, Hugo M, Lai, Carmen, Nuyten, Dimitry S A, Halfwerk, Hans, Kristel, Petra, van Beers, Erik, Joosse, Simon A, Klijn, Christiaan, Nederlof, Petra M, Reinders, Marcel J T, Wessels, Lodewyk F A, van de Vijver, Marc J
Published in Clinical cancer research (15.01.2010)
Published in Clinical cancer research (15.01.2010)
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Cell-free DNA in the supernatant of pleural effusion can be used to detect driver and resistance mutations, and can guide tyrosine kinase inhibitor treatment decisions
Hummelink, Karlijn, Muller, Mirte, Linders, Theodora C, van der Noort, Vincent, Nederlof, Petra M, Baas, Paul, Burgers, Sjaak, Smit, Egbert F, Meijer, Gerrit A, van den Heuvel, Michel M, van den Broek, Daan, Monkhorst, Kim
Published in ERJ open research (01.02.2019)
Published in ERJ open research (01.02.2019)
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Exome sequencing of germline DNA from non-BRCA1/2 familial breast cancer cases selected on the basis of aCGH tumor profiling
Hilbers, Florentine S, Meijers, Caro M, Laros, Jeroen F J, van Galen, Michiel, Hoogerbrugge, Nicoline, Vasen, Hans F A, Nederlof, Petra M, Wijnen, Juul T, van Asperen, Christi J, Devilee, Peter
Published in PloS one (31.01.2013)
Published in PloS one (31.01.2013)
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BRCA1 tumour suppression occurs via heterochromatin - mediated silencing
QUAN ZHU, PAO, Gerald M, HUYNH, Alexis M, SUH, Hoonkyo, TONNU, Nina, NEDERLOF, Petra M, GAGE, Fred H, VERMA, Inder M
Published in Nature (London) (08.09.2011)
Published in Nature (London) (08.09.2011)
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