Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing
Kim, Charissa, Gao, Ruli, Sei, Emi, Brandt, Rachel, Hartman, Johan, Hatschek, Thomas, Crosetto, Nicola, Foukakis, Theodoros, Navin, Nicholas E.
Published in Cell (03.05.2018)
Published in Cell (03.05.2018)
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Spatial charting of single-cell transcriptomes in tissues
Wei, Runmin, He, Siyuan, Bai, Shanshan, Sei, Emi, Hu, Min, Thompson, Alastair, Chen, Ken, Krishnamurthy, Savitri, Navin, Nicholas E.
Published in Nature biotechnology (01.08.2022)
Published in Nature biotechnology (01.08.2022)
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Multiclonal Invasion in Breast Tumors Identified by Topographic Single Cell Sequencing
Casasent, Anna K., Schalck, Aislyn, Gao, Ruli, Sei, Emi, Long, Annalyssa, Pangburn, William, Casasent, Tod, Meric-Bernstam, Funda, Edgerton, Mary E., Navin, Nicholas E.
Published in Cell (11.01.2018)
Published in Cell (11.01.2018)
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Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes
Gao, Ruli, Bai, Shanshan, Henderson, Ying C., Lin, Yiyun, Schalck, Aislyn, Yan, Yun, Kumar, Tapsi, Hu, Min, Sei, Emi, Davis, Alexander, Wang, Fang, Shaitelman, Simona F., Wang, Jennifer Rui, Chen, Ken, Moulder, Stacy, Lai, Stephen Y., Navin, Nicholas E.
Published in Nature biotechnology (01.05.2021)
Published in Nature biotechnology (01.05.2021)
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Clonal evolution in breast cancer revealed by single nucleus genome sequencing
Wang, Yong, Waters, Jill, Leung, Marco L., Unruh, Anna, Roh, Whijae, Shi, Xiuqing, Chen, Ken, Scheet, Paul, Vattathil, Selina, Liang, Han, Multani, Asha, Zhang, Hong, Zhao, Rui, Michor, Franziska, Meric-Bernstam, Funda, Navin, Nicholas E.
Published in Nature (London) (14.08.2014)
Published in Nature (London) (14.08.2014)
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Punctuated copy number evolution and clonal stasis in triple-negative breast cancer
Gao, Ruli, Davis, Alexander, McDonald, Thomas O, Sei, Emi, Shi, Xiuqing, Wang, Yong, Tsai, Pei-Ching, Casasent, Anna, Waters, Jill, Zhang, Hong, Meric-Bernstam, Funda, Michor, Franziska, Navin, Nicholas E
Published in Nature genetics (01.10.2016)
Published in Nature genetics (01.10.2016)
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Single-cell DNA sequencing reveals a late-dissemination model in metastatic colorectal cancer
Leung, Marco L, Davis, Alexander, Gao, Ruli, Casasent, Anna, Wang, Yong, Sei, Emi, Vilar, Eduardo, Maru, Dipen, Kopetz, Scott, Navin, Nicholas E
Published in Genome research (01.08.2017)
Published in Genome research (01.08.2017)
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Genome evolution in ductal carcinoma in situ: invasion of the clones
Casasent, Anna K, Edgerton, Mary, Navin, Nicholas E
Published in The Journal of pathology (01.01.2017)
Published in The Journal of pathology (01.01.2017)
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Somatic Trp53 mutations differentially drive breast cancer and evolution of metastases
Zhang, Yun, Xiong, Shunbin, Liu, Bin, Pant, Vinod, Celii, Francis, Chau, Gilda, Elizondo-Fraire, Ana C., Yang, Peirong, You, Mingjian James, El-Naggar, Adel K., Navin, Nicholas E., Lozano, Guillermina
Published in Nature communications (27.09.2018)
Published in Nature communications (27.09.2018)
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Learning to distinguish progressive and non-progressive ductal carcinoma in situ
Casasent, Anna K., Almekinders, Mathilde M., Mulder, Charlotta, Bhattacharjee, Proteeti, Collyar, Deborah, Thompson, Alastair M., Jonkers, Jos, Lips, Esther H., van Rheenen, Jacco, Hwang, E. Shelley, Nik-Zainal, Serena, Navin, Nicholas E., Wesseling, Jelle
Published in Nature reviews. Cancer (01.12.2022)
Published in Nature reviews. Cancer (01.12.2022)
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Dissociation protocols used for sarcoma tissues bias the transcriptome observed in single-cell and single-nucleus RNA sequencing
Truong, Danh D, Lamhamedi-Cherradi, Salah-Eddine, Porter, Robert W, Krishnan, Sandhya, Swaminathan, Jyothishmathi, Gibson, Amber, Lazar, Alexander J, Livingston, J Andrew, Gopalakrishnan, Vidya, Gordon, Nancy, Daw, Najat C, Navin, Nicholas E, Gorlick, Richard, Ludwig, Joseph A
Published in BMC cancer (31.05.2023)
Published in BMC cancer (31.05.2023)
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Decoding the evolutionary response to prostate cancer therapy by plasma genome sequencing
Ramesh, Naveen, Sei, Emi, Tsai, Pei Ching, Bai, Shanshan, Zhao, Yuehui, Troncoso, Patricia, Corn, Paul G, Logothetis, Christopher, Zurita, Amado J, Navin, Nicholas E
Published in Genome Biology (06.07.2020)
Published in Genome Biology (06.07.2020)
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Highly multiplexed targeted DNA sequencing from single nuclei
Leung, Marco L, Wang, Yong, Kim, Charissa, Gao, Ruli, Jiang, Jerry, Sei, Emi, Navin, Nicholas E
Published in Nature protocols (01.02.2016)
Published in Nature protocols (01.02.2016)
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WW Domain-containing Protein YAP Associates with ErbB-4 and Acts as a Co-transcriptional Activator for the Carboxyl-terminal Fragment of ErbB-4 That Translocates to the Nucleus
Komuro, Akihiko, Nagai, Makoto, Navin, Nicholas E., Sudol, Marius
Published in The Journal of biological chemistry (29.08.2003)
Published in The Journal of biological chemistry (29.08.2003)
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Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
Leighton, Jake, Hu, Min, Sei, Emi, Meric-Bernstam, Funda, Navin, Nicholas E.
Published in Cell genomics (11.01.2023)
Published in Cell genomics (11.01.2023)
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