Use of connectivity mapping to support read across: A deeper dive using data from 186 chemicals, 19 cell lines and 2 case studies
De Abrew, K. Nadira, Shan, Yuqing K., Wang, Xiaohong, Krailler, Jesse M., Kainkaryam, Raghunandan M., Lester, Cathy C., Settivari, Raja S., LeBaron, Matthew J., Naciff, Jorge M., Daston, George P.
Published in Toxicology (Amsterdam) (01.07.2019)
Published in Toxicology (Amsterdam) (01.07.2019)
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Journal Article
Grouping 34 Chemicals Based on Mode of Action Using Connectivity Mapping
De Abrew, K Nadira, Kainkaryam, Raghunandan M, Shan, Yuqing K, Overmann, Gary J, Settivari, Raja S, Wang, Xiaohong, Xu, Jun, Adams, Rachel L, Tiesman, Jay P, Carney, Edward W, Naciff, Jorge M, Daston, George P
Published in Toxicological sciences (01.06.2016)
Published in Toxicological sciences (01.06.2016)
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Journal Article
Toward Good Read-Across Practice (GRAP) guidance
Ball, Nicholas, Cronin, Mark T D, Shen, Jie, Blackburn, Karen, Booth, Ewan D, Bouhifd, Mounir, Donley, Elizabeth, Egnash, Laura, Hastings, Charles, Juberg, Daland R, Kleensang, Andre, Kleinstreuer, Nicole, Kroese, E Dinant, Lee, Adam C, Luechtefeld, Thomas, Maertens, Alexandra, Marty, Sue, Naciff, Jorge M, Palmer, Jessica, Pamies, David, Penman, Mike, Richarz, Andrea-Nicole, Russo, Daniel P, Stuard, Sharon B, Patlewicz, Grace, van Ravenzwaay, Bennard, Wu, Shengde, Zhu, Hao, Hartung, Thomas
Published in ALTEX, alternatives to animal experimentation (2016)
Published in ALTEX, alternatives to animal experimentation (2016)
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Journal Article
Incorporation of in vitro techniques for botanicals dietary supplement safety assessment – Towards evaluation of developmental and reproductive toxicity (DART)
VanderMolen, Karen M., Naciff, Jorge M., Kennedy, Kevin, Otto-Bruc, Annie, Shan, Yuqing, Wang, Xiaohong, Daston, George P., Mahony, Catherine
Published in Food and chemical toxicology (01.10.2020)
Published in Food and chemical toxicology (01.10.2020)
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Journal Article
Article title: Transcriptional profiling efficacy to define biological activity similarity for cosmetic ingredients' safety assessment based on next-generation read-across
Naciff, Jorge M, Shan, Yuquing K, Wang, Xiaohong, Daston, George P
Published in Frontiers in toxicology (21.12.2022)
Published in Frontiers in toxicology (21.12.2022)
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Journal Article
In Response: Ecotoxicogenomics addressing future needs: An industry perspective
Versteeg, Donald J., Naciff, Jorge M.
Published in Environmental toxicology and chemistry (01.04.2015)
Published in Environmental toxicology and chemistry (01.04.2015)
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Journal Article
A strategy for safety assessment of chemicals with data gaps for developmental and/or reproductive toxicity
Blackburn, Karen, Daston, George, Fisher, Joan, Lester, Cathy, Naciff, Jorge M., Rufer, Echoleah S., Stuard, Sharon B., Woeller, Kara
Published in Regulatory toxicology and pharmacology (01.07.2015)
Published in Regulatory toxicology and pharmacology (01.07.2015)
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Journal Article
Identifying chemicals based on receptor binding/bioactivation/mechanistic explanation associated with potential to elicit hepatotoxicity and to support structure activity relationship-based read-across
Wu, Shengde, Daston, George, Rose, Jane, Blackburn, Karen, Fisher, Joan, Reis, Allison, Selman, Bastian, Naciff, Jorge
Published in Current research in toxicology (01.01.2023)
Published in Current research in toxicology (01.01.2023)
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Journal Article
Identification of Putative Gene-Based Markers of Renal Toxicity
Amin, Rupesh P., Vickers, Alison E., Sistare, Frank, Thompson, Karol L., Roman, Richard J., Lawton, Michael, Kramer, Jeffrey, Hamadeh, Hisham K., Collins, Jennifer, Grissom, Sherry, Bennett, Lee, Tucker, C. Jeffrey, Wild, Stacie, Kind, Clive, Oreffo, Victor, Davis, John W., Curtiss, Sandra, Naciff, Jorge M., Cunningham, Michael, Tennant, Raymond, Stevens, James, Car, Bruce, Bertram, Timothy A., Afshari, Cynthia A.
Published in Environmental health perspectives (01.03.2004)
Published in Environmental health perspectives (01.03.2004)
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Journal Article
A novel transcriptomics based in vitro method to compare and predict hepatotoxicity based on mode of action
De Abrew, K. Nadira, Overmann, Gary J, Adams, Rachel L, Tiesman, Jay P, Dunavent, John, Shan, Yuqing K, Carr, Gregory J, Daston, George P, Naciff, Jorge M
Published in Toxicology (Amsterdam) (03.02.2015)
Published in Toxicology (Amsterdam) (03.02.2015)
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Journal Article
Case studies to test: A framework for using structural, reactivity, metabolic and physicochemical similarity to evaluate the suitability of analogs for SAR-based toxicological assessments
Blackburn, Karen, Bjerke, Donald, Daston, George, Felter, Susan, Mahony, Catherine, Naciff, Jorge, Robison, Steven, Wu, Shengde
Published in Regulatory toxicology and pharmacology (01.06.2011)
Published in Regulatory toxicology and pharmacology (01.06.2011)
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Journal Article
The genomic response of Ishikawa cells to bisphenol A exposure is dose- and time-dependent
Naciff, Jorge M, Khambatta, Zubin S, Reichling, Timothy D, Carr, Gregory J, Tiesman, Jay P, Singleton, David W, Khan, Sohaib A, Daston, George P
Published in Toxicology (Amsterdam) (11.04.2010)
Published in Toxicology (Amsterdam) (11.04.2010)
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Journal Article
Predicting developmental toxicity through toxicogenomics
Daston, George P., Naciff, Jorge M.
Published in Birth defects research. Part C. Embryo today (01.06.2010)
Published in Birth defects research. Part C. Embryo today (01.06.2010)
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Journal Article
Effects of Transplacental 17-α-Ethynyl Estradiol or Bisphenol A on the Developmental Profile of Steroidogenic Acute Regulatory Protein in the Rat Testis
Horstman, Karla A., Naciff, Jorge M., Overmann, Gary J., Foertsch, Leslie M., Richardson, Brian D., Daston, George P.
Published in Birth defects research. Part B. Developmental and reproductive toxicology (01.08.2012)
Published in Birth defects research. Part B. Developmental and reproductive toxicology (01.08.2012)
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Journal Article
Gene Expression Changes Induced in the Testis by Transplacental Exposure to High and Low Doses of 17α-Ethynyl Estradiol, Genistein, or Bisphenol A
Naciff, Jorge M., Hess, Karla A., Overmann, Gary J., Torontali, Suzanne M., Carr, Gregory J., Tiesman, Jay P., Foertsch, Leslie M., Richardson, Brian D., Martinez, Joel E., Daston, George P.
Published in Toxicological sciences (01.08.2005)
Published in Toxicological sciences (01.08.2005)
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Journal Article
Gene Expression Profile Induced by 17α-Ethynyl Estradiol, Bisphenol A, and Genistein in the Developing Female Reproductive System of the Rat
Naciff, Jorge M., Jump, M. Lynn, Torontali, Suzanne M., Carr, Gregory J., Tiesman, Jay P., Overmann, Gary J., Daston, George P.
Published in Toxicological sciences (01.07.2002)
Published in Toxicological sciences (01.07.2002)
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Journal Article
Identification of Platform-Independent Gene Expression Markers of Cisplatin Nephrotoxicity
Thompson, Karol L., Afshari, Cynthia A., Amin, Rupesh P., Bertram, Timothy A., Car, Bruce, Cunningham, Michael, Kind, Clive, Kramer, Jeffrey A., Lawton, Michael, Mirsky, Michael, Naciff, Jorge M., Oreffo, Victor, Pine, P. Scott, Sistare, Frank D.
Published in Environmental health perspectives (01.03.2004)
Published in Environmental health perspectives (01.03.2004)
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Journal Article
Overview of the Application of Transcription Profiling Using Selected Nephrotoxicants for Toxicology Assessment
Kramer, Jeffrey A., Pettit, Syril D., Amin, Rupesh P., Bertram, Timothy A., Car, Bruce, Cunningham, Michael, Curtiss, Sandra W., Davis, John W., Kind, Clive, Lawton, Michael, Naciff, Jorge M., Oreffo, Victor, Roman, Richard J., Sistare, Frank D., Stevens, James, Thompson, Karol, Vickers, Alison E., Wild, Stacey, Afshari, Cynthia A.
Published in Environmental health perspectives (01.03.2004)
Published in Environmental health perspectives (01.03.2004)
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Journal Article