Human genotype-to-phenotype predictions: Boosting accuracy with nonlinear models
Medvedev, Aleksandr, Mishra Sharma, Satyarth, Tsatsorin, Evgenii, Nabieva, Elena, Yarotsky, Dmitry
Published in PloS one (31.08.2022)
Published in PloS one (31.08.2022)
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SARS-CoV-2 escape from cytotoxic T cells during long-term COVID-19
Stanevich, Oksana V., Alekseeva, Evgeniia I., Sergeeva, Maria, Fadeev, Artem V., Komissarova, Kseniya S., Ivanova, Anna A., Simakova, Tamara S., Vasilyev, Kirill A., Shurygina, Anna-Polina, Stukova, Marina A., Safina, Ksenia R., Nabieva, Elena R., Garushyants, Sofya K., Klink, Galya V., Bakin, Evgeny A., Zabutova, Jullia V., Kholodnaia, Anastasia N., Lukina, Olga V., Skorokhod, Irina A., Ryabchikova, Viktoria V., Medvedeva, Nadezhda V., Lioznov, Dmitry A., Danilenko, Daria M., Chudakov, Dmitriy M., Komissarov, Andrey B., Bazykin, Georgii A.
Published in Nature communications (10.01.2023)
Published in Nature communications (10.01.2023)
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The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences
Leushkin, Evgeny V, Sutormin, Roman A, Nabieva, Elena R, Penin, Aleksey A, Kondrashov, Alexey S, Logacheva, Maria D
Published in BMC genomics (15.07.2013)
Published in BMC genomics (15.07.2013)
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Spread of endemic SARS-CoV-2 lineages in Russia before April 2021
Klink, Galya V, Safina, Ksenia R, Garushyants, Sofya K, Moldovan, Mikhail, Nabieva, Elena, Komissarov, Andrey B, Lioznov, Dmitry, Bazykin, Georgii A
Published in PloS one (20.07.2022)
Published in PloS one (20.07.2022)
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An Early SARS-CoV-2 Omicron Outbreak in a Dormitory in Saint Petersburg, Russia
Klink, Galya V, Danilenko, Daria, Komissarov, Andrey B, Yolshin, Nikita, Shneider, Olga, Shcherbak, Sergey, Nabieva, Elena, Shvyrev, Nikita, Konovalova, Nadezhda, Zheltukhina, Alyona, Fadeev, Artem, Komissarova, Kseniya, Ksenafontov, Andrey, Musaeva, Tamila, Eder, Veronika, Pisareva, Maria, Nekrasov, Petr, Shchur, Vladimir, Bazykin, Georgii A, Lioznov, Dmitry
Published in Viruses (22.06.2023)
Published in Viruses (22.06.2023)
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Accurate fetal variant calling in the presence of maternal cell contamination
Nabieva, Elena, Sharma, Satyarth Mishra, Kapushev, Yermek, Garushyants, Sofya K, Fedotova, Anna V, Moskalenko, Viktoria N, Serebrenikova, Tatyana E, Glazyrina, Eugene, Kanivets, Ilya V, Pyankov, Denis V, Neretina, Tatyana V, Logacheva, Maria D, Bazykin, Georgii A, Yarotsky, Dmitry
Published in European journal of human genetics : EJHG (01.11.2020)
Published in European journal of human genetics : EJHG (01.11.2020)
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Organization of physical interactomes as uncovered by network schemas
Banks, Eric, Nabieva, Elena, Chazelle, Bernard, Singh, Mona
Published in PLoS computational biology (01.10.2008)
Published in PLoS computational biology (01.10.2008)
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Journal Article
Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps
Nabieva, Elena, Jim, Kam, Agarwal, Amit, Chazelle, Bernard, Singh, Mona
Published in Bioinformatics (01.06.2005)
Published in Bioinformatics (01.06.2005)
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Genomic epidemiology of SARS-CoV-2 in Russia reveals recurring cross-border transmission throughout 2020
Matsvay, Alina, Klink, Galya V, Safina, Ksenia R, Nabieva, Elena, Garushyants, Sofya K, Biba, Dmitry, Bazykin, Georgii A, Mikhaylov, Ivan M, Say, Anna V, Zakamornaya, Anastasiya I, Khakhina, Anastasiya O, Lisitsa, Tatiana S, Ayginin, Andrey A, Abramov, Ivan S, Bogdan, Sergey A, Kolbutova, Kseniya B, Oleynikova, Daria U, Avdeenko, Tatiana F, Shipulin, German A, Yudin, Sergey M, Skvortsova, Veronika I
Published in PloS one (16.05.2023)
Published in PloS one (16.05.2023)
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The rise and spread of the SARS-CoV-2 AY.122 lineage in Russia
Klink, Galya V, Safina, Ksenia R, Nabieva, Elena, Shvyrev, Nikita, Garushyants, Sofya, Alekseeva, Evgeniia, Komissarov, Andrey B, Danilenko, Daria M, Pochtovyi, Andrei A, Divisenko, Elizaveta V, Vasilchenko, Lyudmila A, Shidlovskaya, Elena V, Kuznetsova, Nadezhda A, Speranskaya, Anna S, Samoilov, Andrei E, Neverov, Alexey D, Popova, Anfisa V, Fedonin, Gennady G, Akimkin, Vasiliy G, Lioznov, Dmitry, Gushchin, Vladimir A, Shchur, Vladimir, Bazykin, Georgii A
Published in Virus evolution (2022)
Published in Virus evolution (2022)
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Organization of Physical Interactomes as Uncovered by Network Schemas: e1000203
Banks, Eric, Nabieva, Elena, Chazelle, Bernard, Singh, Mona
Published in PLoS computational biology (01.10.2008)
Published in PLoS computational biology (01.10.2008)
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Journal Article
The rise and spread of the SARS-CoV-2 AY.122 lineage in Russia
Klink, Galya V, Safina, Ksenia, Nabieva, Elena, Shvyrev, Nikita, Garushyants, Sofya, Alekseeva, Evgeniia, Komissarov, Andrey B, Danilenko, Daria M, Pochtovyi, Andrei A, Divisenko, Elizaveta V, Vasilchenko, Lyudmila A, Shidlovskaya, Elena V, Kuznetsova, Nadezhda A, Samoilov, Andrei E, Neverov, Alexey D, Popova, Anfisa V, Fedonin, Gennady G, Akimkin, Vasiliy G, Lioznov, Dmitry, Gushchin, Vladimir A, Shchur, Vladimir, Bazykin, Georgii A
Published in medRxiv : the preprint server for health sciences (05.12.2021)
Published in medRxiv : the preprint server for health sciences (05.12.2021)
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Journal Article
Accurate Fetal Variant Calling in the Presence of Maternal Cell Contamination
Nabieva, Elena, Satyarth Mishra Sharma, Kapushev, Yermek, Garushyans, Sofya K, Fedotova, Anna V, Moskalenko, Viktoria N, Serebrenikova, Tatyana, Glazyrina, Eugene, Kanivets, Ilya V, Pyankov, Denis V, Neretina, Tatyana V, Logacheva, Maria D, Bazykin, Georgii A, Yarotsky, Dmitry
Published in bioRxiv (07.07.2020)
Published in bioRxiv (07.07.2020)
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