Knowledge-based analysis of proteomics data
Bessarabova, Marina, Ishkin, Alexander, JeBailey, Lellean, Nikolskaya, Tatiana, Nikolsky, Yuri
Published in BMC bioinformatics (05.11.2012)
Published in BMC bioinformatics (05.11.2012)
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Regulation of In Situ to Invasive Breast Carcinoma Transition
Hu, Min, Yao, Jun, Carroll, Danielle K., Weremowicz, Stanislawa, Chen, Haiyan, Carrasco, Daniel, Richardson, Andrea, Violette, Shelia, Nikolskaya, Tatiana, Nikolsky, Yuri, Bauerlein, Erica L., Hahn, William C., Gelman, Rebecca S., Allred, Craig, Bissell, Mina J., Schnitt, Stuart, Polyak, Kornelia
Published in Cancer cell (01.05.2008)
Published in Cancer cell (01.05.2008)
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Effect of substituents in chlorin e6 derivatives on the loading efficiency of the photosensitizer into the liposome membrane and their biological activity
Krivosheeva, Olga P., Doctor, Maxim A., Larkina, Ekaterina A., Vedenkin, Alexander S., Nikolskaya, Tatiana A.
Published in Photodiagnosis and photodynamic therapy (01.06.2023)
Published in Photodiagnosis and photodynamic therapy (01.06.2023)
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A comprehensive functional analysis of tissue specificity of human gene expression
Dezso, Zoltán, Nikolsky, Yuri, Sviridov, Evgeny, Shi, Weiwei, Serebriyskaya, Tatiana, Dosymbekov, Damir, Bugrim, Andrej, Rakhmatulin, Eugene, Brennan, Richard J, Guryanov, Alexey, Li, Kelly, Blake, Julie, Samaha, Raymond R, Nikolskaya, Tatiana
Published in BMC biology (12.11.2008)
Published in BMC biology (12.11.2008)
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Effect of training-sample size and classification difficulty on the accuracy of genomic predictors
Popovici, Vlad, Chen, Weijie, Gallas, Brandon G, Hatzis, Christos, Shi, Weiwei, Samuelson, Frank W, Nikolsky, Yuri, Tsyganova, Marina, Ishkin, Alex, Nikolskaya, Tatiana, Hess, Kenneth R, Valero, Vicente, Booser, Daniel, Delorenzi, Mauro, Hortobagyi, Gabriel N, Shi, Leming, Symmans, W Fraser, Pusztai, Lajos
Published in Breast cancer research : BCR (01.01.2010)
Published in Breast cancer research : BCR (01.01.2010)
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Cell type-specific DNA methylation patterns in the human breast
Bloushtain-Qimron, Noga, Yao, Jun, Snyder, Eric L, Shipitsin, Michail, Campbell, Lauren L, Mani, Sendurai A, Hu, Min, Chen, Haiyan, Ustyansky, Vadim, Antosiewicz, Jessica E, Argani, Pedram, Halushka, Marc K, Thomson, James A, Pharoah, Paul, Porgador, Angel, Sukumar, Saraswati, Parsons, Ramon, Richardson, Andrea L, Stampfer, Martha R, Gelman, Rebecca S, Nikolskaya, Tatiana, Nikolsky, Yuri, Polyak, Kornelia
Published in Proceedings of the National Academy of Sciences - PNAS (16.09.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (16.09.2008)
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Atherosclerosis and liver inflammation induced by increased dietary cholesterol intake: a combined transcriptomics and metabolomics analysis
Kleemann, Robert, Verschuren, Lars, van Erk, Marjan J, Nikolsky, Yuri, Cnubben, Nicole H P, Verheij, Elwin R, Smilde, Age K, Hendriks, Henk F J, Zadelaar, Susanne, Smith, Graham J, Kaznacheev, Valery, Nikolskaya, Tatiana, Melnikov, Anton, Hurt-Camejo, Eva, van der Greef, Jan, van Ommen, Ben, Kooistra, Teake
Published in Genome biology (24.09.2007)
Published in Genome biology (24.09.2007)
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Epigenetic regulation of cell type-specific expression patterns in the human mammary epithelium
Maruyama, Reo, Choudhury, Sibgat, Kowalczyk, Adam, Bessarabova, Marina, Beresford-Smith, Bryan, Conway, Thomas, Kaspi, Antony, Wu, Zhenhua, Nikolskaya, Tatiana, Merino, Vanessa F, Lo, Pang-Kuo, Liu, X Shirley, Nikolsky, Yuri, Sukumar, Saraswati, Haviv, Izhak, Polyak, Kornelia
Published in PLoS genetics (01.04.2011)
Published in PLoS genetics (01.04.2011)
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Genome-wide functional synergy between amplified and mutated genes in human breast cancer
Nikolsky, Yuri, Sviridov, Evgeny, Yao, Jun, Dosymbekov, Damir, Ustyansky, Vadim, Kaznacheev, Valery, Dezso, Zoltan, Mulvey, Laura, Macconaill, Laura E, Winckler, Wendy, Serebryiskaya, Tatiana, Nikolskaya, Tatiana, Polyak, Kornelia
Published in Cancer research (Chicago, Ill.) (15.11.2008)
Published in Cancer research (Chicago, Ill.) (15.11.2008)
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Prediction of Organ Toxicity Endpoints by QSAR Modeling Based on Precise Chemical-Histopathology Annotations
Myshkin, Eugene, Brennan, Richard, Khasanova, Tatiana, Sitnik, Tatiana, Serebriyskaya, Tatiana, Litvinova, Elena, Guryanov, Alexey, Nikolsky, Yuri, Nikolskaya, Tatiana, Bureeva, Svetlana
Published in Chemical biology & drug design (01.09.2012)
Published in Chemical biology & drug design (01.09.2012)
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Bimodal gene expression patterns in breast cancer
Bessarabova, Marina, Kirillov, Eugene, Shi, Weiwei, Bugrim, Andrej, Nikolsky, Yuri, Nikolskaya, Tatiana
Published in BMC genomics (10.02.2010)
Published in BMC genomics (10.02.2010)
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Gene expression profiling of human breast tissue samples using SAGE-Seq
Wu, Zhenhua Jeremy, Meyer, Clifford A, Choudhury, Sibgat, Shipitsin, Michail, Maruyama, Reo, Bessarabova, Marina, Nikolskaya, Tatiana, Sukumar, Saraswati, Schwartzman, Armin, Liu, Jun S, Polyak, Kornelia, Liu, X Shirley
Published in Genome research (01.12.2010)
Published in Genome research (01.12.2010)
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A COMBINED APPROACH TO DRUG METABOLISM AND TOXICITY ASSESSMENT
EKINS, Sean, ANDREYEV, Sergey, RYABOV, Andy, KIRILLOV, Eugene, RAKHMATULIN, Eugene A, SOROKINA, Svetlana, BUGRIM, Andrej, NIKOLSKAYA, Tatiana
Published in Drug metabolism and disposition (01.03.2006)
Published in Drug metabolism and disposition (01.03.2006)
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Functional Synergies yet Distinct Modulators Affected by Genetic Alterations in Common Human Cancers
BESSARABOVA, Marina, PUSTOVALOVA, Olga, WEIWEI SHI, SEREBRIYSKAYA, Tatiana, ISHKIN, Alex, POLYAK, Kornelia, VELCULESCU, Victor E, NIKOLSKAYA, Tatiana, NIKOLSKY, Yuri
Published in Cancer research (Chicago, Ill.) (15.05.2011)
Published in Cancer research (Chicago, Ill.) (15.05.2011)
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Network analysis of human glaucomatous optic nerve head astrocytes
Nikolskaya, Tatiana, Nikolsky, Yuri, Serebryiskaya, Tatiana, Zvereva, Svetlana, Sviridov, Eugene, Dezso, Zoltan, Rahkmatulin, Eugene, Brennan, Richard J, Yankovsky, Nick, Bhattacharya, Sanjoy K, Agapova, Olga, Hernandez, M Rosario, Shestopalov, Valery I
Published in BMC medical genomics (09.05.2009)
Published in BMC medical genomics (09.05.2009)
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QUANTITATIVE STRUCTURE-METABOLISM RELATIONSHIP MODELING OF METABOLIC N-DEALKYLATION REACTION RATES
BALAKIN, Konstantin V, EKINS, Sean, BUGRIM, Andrey, IVANENKOV, Yan A, KOROLEV, Dmitry, NIKOLSKY, Yuri V, IVASHCHENKO, Andrey A, SAVCHUK, Nikolay P, NIKOISKAYA, Tatiana
Published in Drug metabolism and disposition (01.10.2004)
Published in Drug metabolism and disposition (01.10.2004)
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Putative Multifunctional Signature of Lung Metastases in Dedifferentiated Chondrosarcoma
Stevens, Jeff W., Kuo, Sean, Hasegawa, Susan L., Nikolsky, Yuri, Seftor, Elisabeth A., Malchenko, Sergey, Poyarkov, Stas, Nikolskaya, Tatiana, Kucaba, Tamara A., Wang, Min, Abdulkawy, Hakim, Casavant, Thomas, Morcuende, Jose, Buckwalter, Joseph, Hohl, Raymond, DeYoung, Barry, Kernstine, Kemp, Bonaldo, Maria de Fatima, Hendrix, Mary J. C., Soares, Marcelo B., Soares, Vera Maria F. C.
Published in Sarcoma (2012)
Published in Sarcoma (2012)
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