X‐ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase
Negoro, Seiji, Shibata, Naoki, Kato, Dai‐ichiro, Tanaka, Yusuke, Yasuhira, Kengo, Nagai, Keisuke, Oshima, Shohei, Furuno, Yoko, Yokoyama, Risa, Miyazaki, Kaito, Takeo, Masahiro, Hengphasatporn, Kowit, Shigeta, Yasuteru, Lee, Young‐Ho, Higuchi, Yoshiki
Published in The FEBS journal (01.07.2023)
Published in The FEBS journal (01.07.2023)
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Journal Article
Structural and functional characterization of nylon hydrolases
Negoro, Seiji, Kato, Dai-Ichiro, Ohki, Taku, Yasuhira, Kengo, Kawashima, Yasuyuki, Nagai, Keisuke, Takeo, Masahiro, Shibata, Naoki, Kamiya, Katsumasa, Shigeta, Yasuteru
Published in Methods in enzymology (2021)
Published in Methods in enzymology (2021)
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Journal Article
Metabolic pathway of 6-aminohexanoate in the nylon oligomer-degrading bacterium Arthrobacter sp. KI72: identification of the enzymes responsible for the conversion of 6-aminohexanoate to adipate
Takehara, Ikki, Fujii, Tsubasa, Tanimoto, Yuuki, Kato, Dai-Ichiro, Takeo, Masahiro, Negoro, Seiji
Published in Applied microbiology and biotechnology (01.01.2018)
Published in Applied microbiology and biotechnology (01.01.2018)
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Journal Article
Biosynthesis-inspired deracemizative production of d-luciferin by combining luciferase and thioesterase
Maeda, Juri, Kato, Dai-ichiro, Okuda, Masatoshi, Takeo, Masahiro, Negoro, Seiji, Arima, Kazunari, Ito, Yuji, Niwa, Kazuki
Published in Biochimica et biophysica acta. General subjects (01.08.2017)
Published in Biochimica et biophysica acta. General subjects (01.08.2017)
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Journal Article
Unraveling the degradation of artificial amide bonds in nylon oligomer hydrolase: from induced-fit to acylation processes
Baba, Takeshi, Boero, Mauro, Kamiya, Katsumasa, Ando, Hiroyuki, Negoro, Seiji, Nakano, Masayoshi, Shigeta, Yasuteru
Published in Physical chemistry chemical physics : PCCP (01.01.2015)
Published in Physical chemistry chemical physics : PCCP (01.01.2015)
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Journal Article
Characterization of the 3-methyl-4-nitrophenol degradation pathway and genes of Pseudomonas sp. strain TSN1
Takeo, Masahiro, Yamamoto, Kenta, Sonoyama, Masashi, Miyanaga, Kana, Kanbara, Nana, Honda, Koichi, Kato, Dai-ichiro, Negoro, Seiji
Published in Journal of bioscience and bioengineering (01.09.2018)
Published in Journal of bioscience and bioengineering (01.09.2018)
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Journal Article
Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase
Negoro, Seiji, Shibata, Naoki, Lee, Young-Ho, Takehara, Ikki, Kinugasa, Ryo, Nagai, Keisuke, Tanaka, Yusuke, Kato, Dai-ichiro, Takeo, Masahiro, Goto, Yuji, Higuchi, Yoshiki
Published in Scientific reports (27.06.2018)
Published in Scientific reports (27.06.2018)
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Journal Article
Enzymatic hydrolysis of nylons: quantification of the reaction rate of nylon hydrolase for thin-layered nylons
Nagai, Keisuke, Iida, Kazuki, Shimizu, Kimiaki, Kinugasa, Ryo, Izumi, Motoki, Kato, Dai-ichiro, Takeo, Masahiro, Mochiji, Kozo, Negoro, Seiji
Published in Applied microbiology and biotechnology (01.10.2014)
Published in Applied microbiology and biotechnology (01.10.2014)
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Journal Article
Mechanism of 4-Nitrophenol Oxidation in Rhodococcus sp. Strain PN1: Characterization of the Two-Component 4-Nitrophenol Hydroxylase and Regulation of Its Expression
TAKEO, Masahiro, MURAKAMI, Masumi, NIIHARA, Sanae, YAMAMOTO, Kenta, NISHIMURA, Munehiro, KATO, Dai-Ichiro, NEGORO, Seiji
Published in Journal of Bacteriology (01.11.2008)
Published in Journal of Bacteriology (01.11.2008)
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Journal Article
Biosynthetic Pathway and Genes of Chitin/Chitosan-Like Bioflocculant in the Genus Citrobacter
Takeo, Masahiro, Kimura, Kazuyuki, Mayilraj, Shanmugam, Inoue, Takuya, Tada, Shohei, Miyamoto, Kouki, Kashiwa, Masami, Ikemoto, Keishi, Baranwal, Priyanka, Kato, Daiichiro, Negoro, Seiji
Published in Polymers (27.02.2018)
Published in Polymers (27.02.2018)
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Journal Article
Draft Genome Sequence of the Nylon Oligomer-Degrading Bacterium Arthrobacter sp. Strain KI72
Takehara, Ikki, Kato, Dai-Ichiro, Takeo, Masahiro, Negoro, Seiji
Published in Genome announcements (Washington, DC) (27.04.2017)
Published in Genome announcements (Washington, DC) (27.04.2017)
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Journal Article
Mutations affecting the internal equilibrium of the reaction catalyzed by 6‐aminohexanoate‐dimer hydrolase
Negoro, Seiji, Kawashima, Yasuyuki, Shibata, Naoki, Kobayashi, Tatsuya, Baba, Takeshi, Lee, Young‐Ho, Kamiya, Katsumasa, Shigeta, Yasuteru, Nagai, Keisuke, Takehara, Ikki, Kato, Dai‐ichiro, Takeo, Masahiro, Higuchi, Yoshiki
Published in FEBS letters (01.09.2016)
Published in FEBS letters (01.09.2016)
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Journal Article
Interconversion of ketoprofen recognition in firefly luciferase-catalyzed enantioselective thioesterification reaction using from Pylocoeria miyako (PmL) and Hotaria parvura (HpL) just by mutating two amino acid residues
Kato, Dai-ichiro, Hiraishi, Yoshihiro, Maenaka, Mika, Yokoyama, Keisuke, Niwa, Kazuki, Ohmiya, Yoshihiro, Takeo, Masahiro, Negoro, Seiji
Published in Journal of biotechnology (01.11.2013)
Published in Journal of biotechnology (01.11.2013)
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Journal Article
Molecular dynamics studies on the mutational structures of a nylon-6 byproduct-degrading enzyme
Baba, Takeshi, Kamiya, Katsumasa, Matsui, Toru, Shibata, Naoki, Higuchi, Yoshiki, Kobayashi, Tatsuya, Negoro, Seiji, Shigeta, Yasuteru
Published in Chemical physics letters (29.04.2011)
Published in Chemical physics letters (29.04.2011)
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Journal Article
Confirmation of color determination factors for Ser286 derivatives of firefly luciferase from Luciola cruciata (LUC-G)
Kato, Dai-ichiro, Kubo, Takaya, Maenaka, Mika, Niwa, Kazuki, Ohmiya, Yoshihiro, Takeo, Masahiro, Negoro, Seiji
Published in Journal of molecular catalysis. B, Enzymatic (01.03.2013)
Published in Journal of molecular catalysis. B, Enzymatic (01.03.2013)
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Journal Article
Enantiodifferentiation of ketoprofen by Japanese firefly luciferase from Luciola lateralis
Kato, Dai-ichiro, Tatsumi, Tomohiro, Bansho, Asami, Teruya, Keisuke, Yoshida, Hiromitsu, Takeo, Masahiro, Negoro, Seiji
Published in Journal of molecular catalysis. B, Enzymatic (01.05.2011)
Published in Journal of molecular catalysis. B, Enzymatic (01.05.2011)
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