The Exoribonuclease Nibbler Controls 3′ End Processing of MicroRNAs in Drosophila
Liu, Nan, Abe, Masashi, Sabin, Leah R., Hendriks, Gert-Jan, Naqvi, Ammar S., Yu, Zhenming, Cherry, Sara, Bonini, Nancy M.
Published in Current biology (22.11.2011)
Published in Current biology (22.11.2011)
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Journal Article
Colonic microbiome is altered in alcoholism
Mutlu, Ece A, Gillevet, Patrick M, Rangwala, Huzefa, Sikaroodi, Masoumeh, Naqvi, Ammar, Engen, Phillip A, Kwasny, Mary, Lau, Cynthia K, Keshavarzian, Ali
Published in American journal of physiology: Gastrointestinal and liver physiology (01.05.2012)
Published in American journal of physiology: Gastrointestinal and liver physiology (01.05.2012)
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Journal Article
Age-driven modulation of tRNA-derived fragments in Drosophila and their potential targets
Karaiskos, Spyros, Naqvi, Ammar S, Swanson, Karl E, Grigoriev, Andrey
Published in Biology direct (16.09.2015)
Published in Biology direct (16.09.2015)
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Journal Article
Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19
Asnani, Mukta, Hayer, Katharina E., Naqvi, Ammar S., Zheng, Sisi, Yang, Scarlett Y., Oldridge, Derek, Ibrahim, Fadia, Maragkakis, Manolis, Gazzara, Matthew R., Black, Kathryn L., Bagashev, Asen, Taylor, Deanne, Mourelatos, Zissimos, Grupp, Stephan A., Barrett, David, Maris, John M., Sotillo, Elena, Barash, Yoseph, Thomas-Tikhonenko, Andrei
Published in Leukemia (01.04.2020)
Published in Leukemia (01.04.2020)
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Journal Article
Characterization of the oral fungal microbiome (mycobiome) in healthy individuals
Ghannoum, Mahmoud A, Jurevic, Richard J, Mukherjee, Pranab K, Cui, Fan, Sikaroodi, Masoumeh, Naqvi, Ammar, Gillevet, Patrick M
Published in PLoS pathogens (01.01.2010)
Published in PLoS pathogens (01.01.2010)
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Journal Article
A transcriptome-based classifier to determine molecular subtypes in medulloblastoma
Rathi, Komal S, Arif, Sherjeel, Koptyra, Mateusz, Naqvi, Ammar S, Taylor, Deanne M, Storm, Phillip B, Resnick, Adam C, Rokita, Jo Lynne, Raman, Pichai
Published in PLoS computational biology (29.10.2020)
Published in PLoS computational biology (29.10.2020)
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Journal Article
Aberrant splicing in B-cell acute lymphoblastic leukemia
Black, Kathryn L, Naqvi, Ammar S, Asnani, Mukta, Hayer, Katharina E, Yang, Scarlett Y, Gillespie, Elisabeth, Bagashev, Asen, Pillai, Vinodh, Tasian, Sarah K, Gazzara, Matthew R, Carroll, Martin, Taylor, Deanne, Lynch, Kristen W, Barash, Yoseph, Thomas-Tikhonenko, Andrei
Published in Nucleic acids research (30.11.2018)
Published in Nucleic acids research (30.11.2018)
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Journal Article
The Msi Family of RNA-Binding Proteins Function Redundantly as Intestinal Oncoproteins
Li, Ning, Yousefi, Maryam, Nakauka-Ddamba, Angela, Li, Fan, Vandivier, Lee, Parada, Kimberly, Woo, Dong-Hun, Wang, Shan, Naqvi, Ammar S., Rao, Shilpa, Tobias, John, Cedeno, Ryan J., Minuesa, Gerard, Y, Katz, Barlowe, Trevor S., Valvezan, Alexander, Shankar, Sheila, Deering, Raquel P., Klein, Peter S., Jensen, Shane T., Kharas, Michael G., Gregory, Brian D., Yu, Zhengquan, Lengner, Christopher J.
Published in Cell reports (Cambridge) (22.12.2015)
Published in Cell reports (Cambridge) (22.12.2015)
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Journal Article
Heterogeneity of surface CD19 and CD22 expression in B lymphoblastic leukemia
Rosenthal, Jaclyn, Naqvi, Ammar S., Luo, Minjie, Wertheim, Gerald, Paessler, Michele, Thomas‐Tikhonenko, Andrei, Rheingold, Susan R., Pillai, Vinodh
Published in American journal of hematology (01.11.2018)
Published in American journal of hematology (01.11.2018)
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Journal Article
AutoGVP: a dockerized workflow integrating ClinVar and InterVar germline sequence variant classification
Kim, Jung, Naqvi, Ammar S, Corbett, Ryan J, Kaufman, Rebecca S, Vaksman, Zalman, Brown, Miguel A, Miller, Daniel P, Phul, Saksham, Geng, Zhuangzhuang, Storm, Phillip B, Resnick, Adam C, Stewart, Douglas R, Rokita, Jo Lynne, Diskin, Sharon J
Published in Bioinformatics (Oxford, England) (04.03.2024)
Published in Bioinformatics (Oxford, England) (04.03.2024)
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Journal Article
annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions
Gaonkar, Krutika S, Marini, Federico, Rathi, Komal S, Jain, Payal, Zhu, Yuankun, Chimicles, Nicholas A, Brown, Miguel A, Naqvi, Ammar S, Zhang, Bo, Storm, Phillip B, Maris, John M, Raman, Pichai, Resnick, Adam C, Strauch, Konstantin, Taroni, Jaclyn N, Rokita, Jo Lynne
Published in BMC bioinformatics (14.12.2020)
Published in BMC bioinformatics (14.12.2020)
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Journal Article
Aberrant splicing in B-cell acute lymphoblastic leukemia
Black, Kathryn L, Naqvi, Ammar S, Asnani, Mukta, Hayer, Katharina E, Yang, Scarlett Y, Gillespie, Elisabeth, Bagashev, Asen, Pillai, Vinodh, Tasian, Sarah K, Gazzara, Matthew R, Carroll, Martin, Taylor, Deanne, Lynch, Kristen W, Barash, Yoseph, Thomas-Tikhonenko, Andrei
Published in Nucleic acids research (25.01.2019)
Published in Nucleic acids research (25.01.2019)
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Journal Article
Impact of age-associated increase in 2'-O-methylation of miRNAs on aging and neurodegeneration in Drosophila
Abe, Masashi, Naqvi, Ammar, Hendriks, Gert-Jan, Feltzin, Virzhiniya, Zhu, Yongqing, Grigoriev, Andrey, Bonini, Nancy M
Published in Genes & development (01.01.2014)
Published in Genes & development (01.01.2014)
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Journal Article
Modulation of CD22 Protein Expression in Childhood Leukemia by Pervasive Splicing Aberrations: Implications for CD22-Directed Immunotherapies
Zheng, Sisi, Gillespie, Elisabeth, Naqvi, Ammar S, Hayer, Katharina E, Ang, Zhiwei, Torres-Diz, Manuel, Quesnel-Vallières, Mathieu, Hottman, David A, Bagashev, Asen, Chukinas, John, Schmidt, Carolin, Asnani, Mukta, Shraim, Rawan, Taylor, Deanne M, Rheingold, Susan R, O'Brien, Maureen M, Singh, Nathan, Lynch, Kristen W, Ruella, Marco, Barash, Yoseph, Tasian, Sarah K, Thomas-Tikhonenko, Andrei
Published in Blood cancer discovery (01.03.2022)
Published in Blood cancer discovery (01.03.2022)
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Journal Article
FBXW7β isoform drives transcriptional activation of the proinflammatory TNF cluster in human pro-B cells
Yang, Scarlett Y., Hayer, Katharina E., Fazelinia, Hossein, Spruce, Lynn A., Asnani, Mukta, Black, Kathryn L., Naqvi, Ammar S., Pillai, Vinodh, Barash, Yoseph, Elenitoba-Johnson, Kojo S. J., Thomas-Tikhonenko, Andrei
Published in Blood advances (11.04.2023)
Published in Blood advances (11.04.2023)
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Journal Article
Targeting CD123 in blastic plasmacytoid dendritic cell neoplasm using allogeneic anti-CD123 CAR T cells
Cai, Tianyu, Gouble, Agnès, Black, Kathryn L., Skwarska, Anna, Naqvi, Ammar S., Taylor, Deanne, Zhao, Ming, Yuan, Qi, Sugita, Mayumi, Zhang, Qi, Galetto, Roman, Filipe, Stéphanie, Cavazos, Antonio, Han, Lina, Kuruvilla, Vinitha, Ma, Helen, Weng, Connie, Liu, Chang-Gong, Liu, Xiuping, Konoplev, Sergej, Gu, Jun, Tang, Guilin, Su, Xiaoping, Al-Atrash, Gheath, Ciurea, Stefan, Neelapu, Sattva S., Lane, Andrew A., Kantarjian, Hagop, Guzman, Monica L., Pemmaraju, Naveen, Smith, Julianne, Thomas-Tikhonenko, Andrei, Konopleva, Marina
Published in Nature communications (28.04.2022)
Published in Nature communications (28.04.2022)
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Journal Article
Investigation of Heat Transfer and Pressure Drop in Microchannel Heat Sink Using Al2O3 and ZrO2 Nanofluids
Khan, Muhammad Zia Ullah, Uddin, Emad, Akbar, Bilal, Akram, Naveed, Naqvi, Ali Ammar, Sajid, Muhammad, Ali, Zaib, Younis, Md. Yamin, García Márquez, Fausto Pedro
Published in Nanomaterials (Basel, Switzerland) (01.09.2020)
Published in Nanomaterials (Basel, Switzerland) (01.09.2020)
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Journal Article
The Open Pediatric Cancer Project
Geng, Zhuangzhuang, Wafula, Eric, Corbett, Ryan J, Zhang, Yuanchao, Jin, Run, Gaonkar, Krutika S, Shukla, Sangeeta, Rathi, Komal S, Hill, Dave, Lahiri, Aditya, Miller, Daniel P, Sickler, Alex, Keith, Kelsey, Blackden, Christopher, Chroni, Antonia, Brown, Miguel A, Kraya, Adam A, Koschmann, Carl J, Aldape, Kenneth, Huang, Xiaoyan, Rood, Brian R, Mason, Jennifer L, Trooskin, Gerri R, Abdullaev, Zied, Wang, Pei, Zhu, Yuankun, Farrow, Bailey K, Farrel, Alvin, Dybas, Joseph M, Zhong, Chuwei, Kuren, Nicholas Van, Zhang, Bo, Santi, Mariarita, Phul, Saksham, Chinwalla, Asif T, Resnick, Adam C, Diskin, Sharon J, Tasian, Sarah, Stefankiewicz, Stephanie, Maris, John M, Ennis, Brian M, Lueder, Matthew R, Naqvi, Ammar S, Coleman, Noel, Ma, Weiping, Taylor, Deanne, Rokita, Jo Lynne
Published in bioRxiv (11.07.2024)
Published in bioRxiv (11.07.2024)
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