SBOL Visual: A Graphical Language for Genetic Designs
Quinn, Jacqueline Y, Cox, 3rd, Robert Sidney, Adler, Aaron, Beal, Jacob, Bhatia, Swapnil, Cai, Yizhi, Chen, Joanna, Clancy, Kevin, Galdzicki, Michal, Hillson, Nathan J, Le Novère, Nicolas, Maheshwari, Akshay J, McLaughlin, James Alastair, Myers, Chris J, P, Umesh, Pocock, Matthew, Rodriguez, Cesar, Soldatova, Larisa, Stan, Guy-Bart V, Swainston, Neil, Wipat, Anil, Sauro, Herbert M
Published in PLoS biology (01.12.2015)
Published in PLoS biology (01.12.2015)
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iBioSim: a tool for the analysis and design of genetic circuits
Myers, Chris J., Barker, Nathan, Jones, Kevin, Kuwahara, Hiroyuki, Madsen, Curtis, Nguyen, Nam-Phuong D.
Published in Bioinformatics (01.11.2009)
Published in Bioinformatics (01.11.2009)
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The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2
Hucka, Michael, Bergmann, Frank T, Chaouiya, Claudine, Dräger, Andreas, Hoops, Stefan, Keating, Sarah M, König, Matthias, Novère, Nicolas Le, Myers, Chris J, Olivier, Brett G, Sahle, Sven, Schaff, James C, Sheriff, Rahuman, Smith, Lucian P, Waltemath, Dagmar, Wilkinson, Darren J, Zhang, Fengkai
Published in Journal of integrative bioinformatics (20.06.2019)
Published in Journal of integrative bioinformatics (20.06.2019)
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Journal Article
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core
Hucka, Michael, Bergmann, Frank T., Dräger, Andreas, Hoops, Stefan, Keating, Sarah M., Le Novère, Nicolas, Myers, Chris J., Olivier, Brett G., Sahle, Sven, Schaff, James C., Smith, Lucian P., Waltemath, Dagmar, Wilkinson, Darren J.
Published in Journal of integrative bioinformatics (09.03.2018)
Published in Journal of integrative bioinformatics (09.03.2018)
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Journal Article
The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering
McLaughlin, James Alastair, Beal, Jacob, Mısırlı, Göksel, Grünberg, Raik, Bartley, Bryan A, Scott-Brown, James, Vaidyanathan, Prashant, Fontanarrosa, Pedro, Oberortner, Ernst, Wipat, Anil, Gorochowski, Thomas E, Myers, Chris J
Published in Frontiers in bioengineering and biotechnology (11.09.2020)
Published in Frontiers in bioengineering and biotechnology (11.09.2020)
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Specifications of standards in systems and synthetic biology: status, developments, and tools in 2024
Golebiewski, Martin, Bader, Gary, Gleeson, Padraig, Gorochowski, Thomas E., Keating, Sarah M., König, Matthias, Myers, Chris J., Nickerson, David P., Sommer, Björn, Waltemath, Dagmar, Schreiber, Falk
Published in Journal of integrative bioinformatics (31.07.2024)
Published in Journal of integrative bioinformatics (31.07.2024)
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Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022
König, Matthias, Gleeson, Padraig, Golebiewski, Martin, Gorochowski, Thomas E., Hucka, Michael, Keating, Sarah M., Myers, Chris J., Nickerson, David P., Sommer, Björn, Waltemath, Dagmar, Schreiber, Falk
Published in Journal of integrative bioinformatics (01.03.2023)
Published in Journal of integrative bioinformatics (01.03.2023)
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Synthetic biology open language (SBOL) version 3.0.0
Baig, Hasan, Fontanarrosa, Pedro, Kulkarni, Vishwesh, McLaughlin, James Alastair, Vaidyanathan, Prashant, Bartley, Bryan, Beal, Jacob, Crowther, Matthew, Gorochowski, Thomas E., Grünberg, Raik, Misirli, Goksel, Scott-Brown, James, Oberortner, Ernst, Wipat, Anil, Myers, Chris J.
Published in Journal of integrative bioinformatics (25.06.2020)
Published in Journal of integrative bioinformatics (25.06.2020)
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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
Waltemath, Dagmar, Golebiewski, Martin, Blinov, Michael L, Gleeson, Padraig, Hermjakob, Henning, Hucka, Michael, Inau, Esther Thea, Keating, Sarah M, König, Matthias, Krebs, Olga, Malik-Sheriff, Rahuman S, Nickerson, David, Oberortner, Ernst, Sauro, Herbert M, Schreiber, Falk, Smith, Lucian, Stefan, Melanie I, Wittig, Ulrike, Myers, Chris J
Published in Journal of integrative bioinformatics (29.06.2020)
Published in Journal of integrative bioinformatics (29.06.2020)
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Quantitative characterization of recombinase-based digitizer circuits enables predictable amplification of biological signals
Kiwimagi, Katherine A., Letendre, Justin H., Weinberg, Benjamin H., Wang, Junmin, Chen, Mingzhe, Watanabe, Leandro, Myers, Chris J., Beal, Jacob, Wong, Wilson W., Weiss, Ron
Published in Communications biology (15.07.2021)
Published in Communications biology (15.07.2021)
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Specifications of standards in systems and synthetic biology: status and developments in 2021
Schreiber, Falk, Gleeson, Padraig, Golebiewski, Martin, Gorochowski, Thomas E., Hucka, Michael, Keating, Sarah M., König, Matthias, Myers, Chris J., Nickerson, David P., Sommer, Björn, Waltemath, Dagmar
Published in Journal of integrative bioinformatics (22.10.2021)
Published in Journal of integrative bioinformatics (22.10.2021)
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Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1
Smith, Lucian P., Moodie, Stuart L., Bergmann, Frank T., Gillespie, Colin, Keating, Sarah M., König, Matthias, Myers, Chris J., Swat, Maciek J., Wilkinson, Darren J., Hucka, Michael
Published in Journal of integrative bioinformatics (20.07.2020)
Published in Journal of integrative bioinformatics (20.07.2020)
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Journal Article
Evaluating the Contribution of Model Complexity in Predicting Robustness in Synthetic Genetic Circuits
Buecherl, Lukas, Myers, Chris J., Fontanarrosa, Pedro
Published in ACS synthetic biology (20.09.2024)
Published in ACS synthetic biology (20.09.2024)
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Journal Article
Genetic circuit design automation with Cello 2.0
Jones, Timothy S., Oliveira, Samuel M. D., Myers, Chris J., Voigt, Christopher A., Densmore, Douglas
Published in Nature protocols (01.04.2022)
Published in Nature protocols (01.04.2022)
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Journal Article
PhageBox: An Open Source Digital Microfluidic Extension With Applications for Phage Discovery
Albin, Dreycey, Buecherl, Lukas, Kochavi, Eitan, Niehaus, Elise, Novack, Sasha, Uragoda, Shenali, Myers, Chris J., Alistar, Mirela
Published in IEEE transactions on biomedical engineering (01.01.2024)
Published in IEEE transactions on biomedical engineering (01.01.2024)
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