Untangling introductions and persistence in COVID-19 resurgence in Europe
Lemey, Philippe, Ruktanonchai, Nick, Hong, Samuel L., Colizza, Vittoria, Poletto, Chiara, Van den Broeck, Frederik, Gill, Mandev S., Ji, Xiang, Levasseur, Anthony, Oude Munnink, Bas B., Koopmans, Marion, Sadilek, Adam, Lai, Shengjie, Tatem, Andrew J., Baele, Guy, Suchard, Marc A., Dellicour, Simon
Published in Nature (London) (29.07.2021)
Published in Nature (London) (29.07.2021)
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Comparative pathogenesis of COVID-19, MERS, and SARS in a nonhuman primate model
Rockx, Barry, Kuiken, Thijs, Herfst, Sander, Bestebroer, Theo, Lamers, Mart M, Oude Munnink, Bas B, de Meulder, Dennis, van Amerongen, Geert, van den Brand, Judith, Okba, Nisreen M A, Schipper, Debby, van Run, Peter, Leijten, Lonneke, Sikkema, Reina, Verschoor, Ernst, Verstrepen, Babs, Bogers, Willy, Langermans, Jan, Drosten, Christian, Fentener van Vlissingen, Martje, Fouchier, Ron, de Swart, Rik, Koopmans, Marion, Haagmans, Bart L
Published in Science (29.05.2020)
Published in Science (29.05.2020)
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SARS-CoV-2 infection in farmed minks, the Netherlands, April and May 2020
Oreshkova, Nadia, Molenaar, Robert Jan, Vreman, Sandra, Harders, Frank, Oude Munnink, Bas B, Hakze-van der Honing, Renate W, Gerhards, Nora, Tolsma, Paulien, Bouwstra, Ruth, Sikkema, Reina S, Tacken, Mirriam Gj, de Rooij, Myrna Mt, Weesendorp, Eefke, Engelsma, Marc Y, Bruschke, Christianne Jm, Smit, Lidwien Am, Koopmans, Marion, van der Poel, Wim Hm, Stegeman, Arjan
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (11.06.2020)
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (11.06.2020)
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Monitoring SARS-CoV-2 Circulation and Diversity through Community Wastewater Sequencing, the Netherlands and Belgium
Izquierdo-Lara, Ray, Elsinga, Goffe, Heijnen, Leo, Munnink, Bas B Oude, Schapendonk, Claudia M E, Nieuwenhuijse, David, Kon, Matthijs, Lu, Lu, Aarestrup, Frank M, Lycett, Samantha, Medema, Gertjan, Koopmans, Marion P G, de Graaf, Miranda
Published in Emerging infectious diseases (01.05.2021)
Published in Emerging infectious diseases (01.05.2021)
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Journal Article
Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans
Oude Munnink, Bas B, Sikkema, Reina S, Nieuwenhuijse, David F, Molenaar, Robert Jan, Munger, Emmanuelle, Molenkamp, Richard, van der Spek, Arco, Tolsma, Paulien, Rietveld, Ariene, Brouwer, Miranda, Bouwmeester-Vincken, Noortje, Harders, Frank, Hakze-van der Honing, Renate, Wegdam-Blans, Marjolein C A, Bouwstra, Ruth J, GeurtsvanKessel, Corine, van der Eijk, Annemiek A, Velkers, Francisca C, Smit, Lidwien A M, Stegeman, Arjan, van der Poel, Wim H M, Koopmans, Marion P G
Published in Science (08.01.2021)
Published in Science (08.01.2021)
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West Nile virus spread in Europe: Phylogeographic pattern analysis and key drivers
Lu, Lu, Zhang, Feifei, Oude Munnink, Bas B, Munger, Emmanuelle, Sikkema, Reina S, Pappa, Styliani, Tsioka, Katerina, Sinigaglia, Alessandro, Dal Molin, Emanuela, Shih, Barbara B, Günther, Anne, Pohlmann, Anne, Ziegler, Ute, Beer, Martin, Taylor, Rachel A, Bartumeus, Frederic, Woolhouse, Mark, Aarestrup, Frank M, Barzon, Luisa, Papa, Anna, Lycett, Samantha, Koopmans, Marion P G
Published in PLoS pathogens (01.01.2024)
Published in PLoS pathogens (01.01.2024)
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An early warning system for emerging SARS-CoV-2 variants
Subissi, Lorenzo, von Gottberg, Anne, Thukral, Lipi, Worp, Nathalie, Oude Munnink, Bas B., Rathore, Surabhi, Abu-Raddad, Laith J., Aguilera, Ximena, Alm, Erik, Archer, Brett N., Attar Cohen, Homa, Barakat, Amal, Barclay, Wendy S., Bhiman, Jinal N., Caly, Leon, Chand, Meera, Chen, Mark, Cullinane, Ann, de Oliveira, Tulio, Drosten, Christian, Druce, Julian, Effler, Paul, El Masry, Ihab, Faye, Adama, Gaseitsiwe, Simani, Ghedin, Elodie, Grant, Rebecca, Haagmans, Bart L., Herring, Belinda L., Iyer, Shilpa S., Kassamali, Zyleen, Kakkar, Manish, Kondor, Rebecca J., Leite, Juliana A., Leo, Yee-Sin, Leung, Gabriel M., Marklewitz, Marco, Moyo, Sikhulile, Mendez-Rico, Jairo, Melhem, Nada M., Munster, Vincent, Nahapetyan, Karen, Oh, Djin-Ye, Pavlin, Boris I., Peacock, Thomas P., Peiris, Malik, Peng, Zhibin, Poon, Leo L. M., Rambaut, Andrew, Sacks, Jilian, Shen, Yinzhong, Siqueira, Marilda M., Tessema, Sofonias K., Volz, Erik M., Thiel, Volker, van der Werf, Sylvie, Briand, Sylvie, Perkins, Mark D., Van Kerkhove, Maria D., Koopmans, Marion P. G., Agrawal, Anurag
Published in Nature Medicine (01.06.2022)
Published in Nature Medicine (01.06.2022)
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Systematic detection of co-infection and intra-host recombination in more than 2 million global SARS-CoV-2 samples
Pipek, Orsolya Anna, Medgyes-Horváth, Anna, Stéger, József, Papp, Krisztián, Visontai, Dávid, Koopmans, Marion, Nieuwenhuijse, David, Oude Munnink, Bas B., Csabai, István
Published in Nature communications (15.01.2024)
Published in Nature communications (15.01.2024)
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COVID-19 in health-care workers in three hospitals in the south of the Netherlands: a cross-sectional study
Sikkema, Reina S, Pas, Suzan D, Nieuwenhuijse, David F, O'Toole, Áine, Verweij, Jaco, van der Linden, Anne, Chestakova, Irina, Schapendonk, Claudia, Pronk, Mark, Lexmond, Pascal, Bestebroer, Theo, Overmars, Ronald J, van Nieuwkoop, Stefan, van den Bijllaardt, Wouter, Bentvelsen, Robbert G, van Rijen, Miranda M L, Buiting, Anton G M, van Oudheusden, Anne J G, Diederen, Bram M, Bergmans, Anneke M C, van der Eijk, Annemiek, Molenkamp, Richard, Rambaut, Andrew, Timen, Aura, Kluytmans, Jan A J W, Oude Munnink, Bas B, Kluytmans van den Bergh, Marjolein F Q, Koopmans, Marion P G
Published in The Lancet infectious diseases (01.11.2020)
Published in The Lancet infectious diseases (01.11.2020)
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Population-based screening in a municipality after a primary school outbreak of the SARS-CoV-2 Alpha variant, the Netherlands, December 2020-February 2021
van Beek, Janko, Teesing, Gwen, Oude Munnink, Bas B, Meima, Abraham, Vriend, Henrike J, Elzakkers, Jessica, de Graaf, Miranda, Langeveld, Jeroen, Medema, Gert-Jan, Molenkamp, Richard, Voeten, Helene, Fanoy, Ewout, Koopmans, Marion
Published in PloS one (27.10.2022)
Published in PloS one (27.10.2022)
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SARS-CoV-2 variants of concern partially escape humoral but not T-cell responses in COVID-19 convalescent donors and vaccinees
Geers, Daryl, Shamier, Marc C, Bogers, Susanne, den Hartog, Gerco, Gommers, Lennert, Nieuwkoop, Nella N, Schmitz, Katharina S, Rijsbergen, Laurine C, van Osch, Jolieke A T, Dijkhuizen, Emma, Smits, Gaby, Comvalius, Anouskha, van Mourik, Djenolan, Caniels, Tom G, van Gils, Marit J, Sanders, Rogier W, Oude Munnink, Bas B, Molenkamp, Richard, de Jager, Herbert J, Haagmans, Bart L, de Swart, Rik L, Koopmans, Marion P G, van Binnendijk, Robert S, de Vries, Rory D, GeurtsvanKessel, Corine H
Published in Science immunology (25.05.2021)
Published in Science immunology (25.05.2021)
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SARS-CoV-2 in lions, gorillas and zookeepers in the Rotterdam Zoo, the Netherlands, a One Health investigation, November 2021
Dusseldorp, Florien, Bruins-van-Sonsbeek, Linda G R, Buskermolen, Maaike, Niphuis, Henk, Dirven, Mariëlle, Whelan, Jane, Oude Munnink, Bas B, Koopmans, Marion, Fanoy, Ewout B, Sikkema, Reina S, Tjon-A-Tsien, Aimée
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (13.07.2023)
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (13.07.2023)
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Genomic monitoring to understand the emergence and spread of Usutu virus in the Netherlands, 2016–2018
Oude Munnink, B. Bas, Münger, E., Nieuwenhuijse, D. F., Kohl, R., van der Linden, A., Schapendonk, C. M. E., van der Jeugd, H., Kik, M., Rijks, J. M., Reusken, C. B. E. M., Koopmans, M.
Published in Scientific reports (18.02.2020)
Published in Scientific reports (18.02.2020)
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Mpox outbreak among men who have sex with men in Amsterdam and Rotterdam, the Netherlands: no evidence for undetected transmission prior to May 2022, a retrospective study
de Vries, Henry J, Götz, Hannelore M, Bruisten, Sylvia, van der Eijk, Annemiek A, Prins, Maria, Oude Munnink, Bas B, Welkers, Matthijs Ra, Jonges, Marcel, Molenkamp, Richard, Westerhuis, Brenda M, Schuele, Leonard, Stam, Arjen, Boter, Marjan, Hoornenborg, Elske, Mulders, Daphne, van den Lubben, Mariken, Koopmans, Marion
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (27.04.2023)
Published in Euro surveillance : bulletin européen sur les maladies transmissibles (27.04.2023)
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Highly Divergent SARS-CoV-2 Alpha Variant in Chronically Infected Immunocompromised Person
Munnink, Bas B Oude, Nijhuis, Roel H T, Worp, Nathalie, Boter, Marjan, Weller, Babette, Verstrepen, Babs E, GeurtsvanKessel, Corine, Corsten, Maarten F, Russcher, Anne, Koopmans, Marion
Published in Emerging infectious diseases (01.09.2022)
Published in Emerging infectious diseases (01.09.2022)
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Reinfection of Severe Acute Respiratory Syndrome Coronavirus 2 in an Immunocompromised Patient: A Case Report
Mulder, Marlies, van der Vegt, Dewi S J M, Oude Munnink, Bas B, GeurtsvanKessel, Corine H, van de Bovenkamp, Jeroen, Sikkema, Reina S, Jacobs, Esther M G, Koopmans, Marion P G, Wegdam-Blans, Marjolijn C A
Published in Clinical infectious diseases (01.11.2021)
Published in Clinical infectious diseases (01.11.2021)
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