PyHIST: A Histological Image Segmentation Tool
Muñoz-Aguirre, Manuel, Ntasis, Vasilis F, Rojas, Santiago, Guigó, Roderic
Published in PLoS computational biology (19.10.2020)
Published in PLoS computational biology (19.10.2020)
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The effects of death and post-mortem cold ischemia on human tissue transcriptomes
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Published in Nature communications (13.02.2018)
Published in Nature communications (13.02.2018)
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Brain transcriptomic profiling reveals common alterations across neurodegenerative and psychiatric disorders
Sadeghi, Iman, Gispert, Juan D., Palumbo, Emilio, Muñoz-Aguirre, Manuel, Wucher, Valentin, D'Argenio, Valeria, Santpere, Gabriel, Navarro, Arcadi, Guigo, Roderic, Vilor-Tejedor, Natàlia
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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A limited set of transcriptional programs define major cell types
Breschi, Alessandra, Muñoz-Aguirre, Manuel, Wucher, Valentin, Davis, Carrie A, Garrido-Martín, Diego, Djebali, Sarah, Gillis, Jesse, Pervouchine, Dmitri D, Vlasova, Anna, Dobin, Alexander, Zaleski, Chris, Drenkow, Jorg, Danyko, Cassidy, Scavelli, Alexandra, Reverter, Ferran, Snyder, Michael P, Gingeras, Thomas R, Guigó, Roderic
Published in Genome research (01.07.2020)
Published in Genome research (01.07.2020)
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The effects of death and post-mortem cold ischemia on human tissue transcriptomes
Ferreira, Pedro G, Muñoz-Aguirre, Manuel, Reverter Comes, Ferran, Godinho, Caio P. Sá, Sousa, Abel, Amadoz, Alicia, Sodaei, Reza, Hidalgo, Marta R, Pervouchine, Dmitri D, Carbonell-Caballero, Jose, Nurtdinov, Ramil, Breschi, Alessandra, 1988, Amador, Raziel, Oliveira, Patrícia, Çubut, Cankut, Curado, Joao, Aguet, François, Oliveira, Carla, Dopazo, Joaquín, Sammeth, Michael, Ardlie, Kristin G, Guigó Serra, Roderic
Published in Nature communications (2018)
Published in Nature communications (2018)
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Cell type specific genetic regulation of gene expression across human tissues
Kim-Hellmuth, Sarah, Aguet, Francois, Oliva, Meritxell, Munoz-Aguirre, Manuel, Wucher, Valentin, Silva Kasela, Castel, Stephane E, Hamel, Andrew, Vinuela, Ana, Roberts, Amy L, Serghei Mangul, Wen, Xiaoquan, Wang, Gao, Barbeira, Alvaro, Garrido-Martin, Diego, Nadel, Brian, Zou, Yuxin, Bonazzola, Rodrigo, Quan, Jie, Brown, Andrew, Martinez-Perez, Angel, Soria, Jose Manuel, The Gtex Consortium, Getz, Gad, Dermitzakis, Emmanouil, Small, Kerrin S, Stephens, Matthew, Xi, Hualin S, Im, Hae Kyung, Guigo, Roderic, Segre, Ayellet, Stranger, Barbara, Ardlie, Kristin, Lappalainen, Tuuli
Published in bioRxiv (17.10.2019)
Published in bioRxiv (17.10.2019)
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Brain transcriptomic profiling reveals common alterations across neurodegenerative and psychiatric disorders
Sadeghi, Iman, Gispert, Juan D, Palumbo, Emilio, Muñoz-Aguirre, Manuel, Wucher, Valentin, Valeria D’argenio, Santpere, Gabriel, Navarro, Arcadi, Guigo, Roderic, Vilor-Tejedor, Natàlia
Published in bioRxiv (20.08.2021)
Published in bioRxiv (20.08.2021)
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The GTEx Consortium atlas of genetic regulatory effects across human tissues
Aguet, François, Barbeira, Alvaro N, Bonazzola, Rodrigo, Brown, Andrew, Castel, Stephane E, Jo, Brian, Silva Kasela, Kim-Hellmuth, Sarah, Liang, Yanyu, Oliva, Meritxell, Parsana, Princy E, Flynn, Elise, Fresard, Laure, Gaamzon, Eric R, Hamel, Andrew R, He, Yuan, Hormozdiari, Farhad, Mohammadi, Pejman, Muñoz-Aguirre, Manuel, Park, Yoson, Saha, Ashis, Segrć, Ayellet V, Strober, Benjamin J, Wen, Xiaoquan, Wucher, Valentin, Das, Sayantan, Garrido-Martín, Diego, Gay, Nicole R, Handsaker, Robert E, Hoffman, Paul J, Kashin, Seva, Kwong, Alan, Li, Xiao, Macarthur, Daniel, Rouhana, John M, Stephens, Matthew, Todres, Ellen, Viñuela, Ana, Wang, Gao, Zou, Yuxin, The Gtex Consortium, Brown, Christopher D, Cox, Nancy, Dermitzakis, Emmanouil, Engelhardt, Barbara E, Getz, Gad, Guigo, Roderic, Montgomery, Stephen B, Stranger, Barbara E, Im, Hae Kyung, Battle, Alexis, Ardlie, Kristin G, Lappalainen, Tuuli
Published in bioRxiv (03.10.2019)
Published in bioRxiv (03.10.2019)
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Paper
A limited set of transcriptional programs define major cell types
Breschi, Alessandra, Muñoz-Aguirre, Manuel, Wucher, Valentin, Davis, Carrie A, Garrido-Martín, Diego, Djebali, Sarah, Gillis, Jesse, Pervouchine, Dmitri D, Vlasova, Anna, Dobin, Alexander, Zaleski, Chris, Drenkow, Jorg, Cassidy Danyko, Scavelli, Alexandra, Reverter, Ferran, Snyder, Michael P, Gingeras, Thomas R, Guigó, Roderic
Published in bioRxiv (11.03.2020)
Published in bioRxiv (11.03.2020)
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