Genome evolution and the emergence of pathogenicity in avian Escherichia coli
Mageiros, Leonardos, Méric, Guillaume, Bayliss, Sion C, Pensar, Johan, Pascoe, Ben, Mourkas, Evangelos, Calland, Jessica K, Yahara, Koji, Murray, Susan, Wilkinson, Thomas S, Williams, Lisa K, Hitchings, Matthew D, Porter, Jonathan, Kemmett, Kirsty, Feil, Edward J, Jolley, Keith A, Williams, Nicola J, Corander, Jukka, Sheppard, Samuel K
Published in Nature communications (03.02.2021)
Published in Nature communications (03.02.2021)
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Journal Article
Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter
Mourkas, Evangelos, Yahara, Koji, Bayliss, Sion C, Calland, Jessica K, Johansson, Håkan, Mageiros, Leonardos, Muñoz-Ramirez, Zilia Y, Futcher, Grant, Méric, Guillaume, Hitchings, Matthew D, Sandoval-Motta, Santiago, Torres, Javier, Jolley, Keith A, Maiden, Martin C J, Ellström, Patrik, Waldenström, Jonas, Pascoe, Ben, Sheppard, Samuel K
Published in eLife (22.02.2022)
Published in eLife (22.02.2022)
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Journal Article
A high fidelity approach to assembling the complex Borrelia genome
Hepner, Sabrina, Kuleshov, Konstantin, Tooming-Kunderud, Ave, Alig, Nikolas, Gofton, Alexander, Casjens, Sherwood, Rollins, Robert E, Dangel, Alexandra, Mourkas, Evangelos, Sheppard, Samuel K, Wieser, Andreas, Hübner, Johannes, Sing, Andreas, Fingerle, Volker, Margos, Gabriele
Published in BMC genomics (17.07.2023)
Published in BMC genomics (17.07.2023)
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Journal Article
Sexual size dimorphism in mammals is associated with changes in the size of gene families related to brain development
Padilla-Morales, Benjamin, Acuña-Alonzo, Alin P, Kilili, Huseyin, Castillo-Morales, Atahualpa, Díaz-Barba, Karina, Maher, Kathryn H, Fabian, Laurie, Mourkas, Evangelos, Székely, Tamás, Serrano-Meneses, Martin-Alejandro, Cortez, Diego, Ancona, Sergio, Urrutia, Araxi O
Published in Nature communications (24.07.2024)
Published in Nature communications (24.07.2024)
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Journal Article
Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages
Calland, Jessica K, Pascoe, Ben, Bayliss, Sion C, Mourkas, Evangelos, Berthenet, Elvire, Thorpe, Harry A, Hitchings, Matthew D, Feil, Edward J, Corander, Jukka, Blaser, Martin J, Falush, Daniel, Sheppard, Samuel K
Published in PLoS genetics (28.09.2021)
Published in PLoS genetics (28.09.2021)
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Journal Article
Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli
Mageiros, Leonardos, Méric, Guillaume, Bayliss, Sion C, Pensar, Johan, Pascoe, Ben, Mourkas, Evangelos, Calland, Jessica K, Yahara, Koji, Murray, Susan, Wilkinson, Thomas S, Williams, Lisa K, Hitchings, Matthew D, Porter, Jonathan, Kemmett, Kirsty, Feil, Edward J, Jolley, Keith A, Williams, Nicola J, Corander, Jukka, Sheppard, Samuel K
Published in Nature communications (22.03.2021)
Published in Nature communications (22.03.2021)
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Journal Article
Campylobacter jejuni genotypes are associated with post-infection irritable bowel syndrome in humans
Peters, Stephanie, Pascoe, Ben, Wu, Zuowei, Bayliss, Sion C, Zeng, Ximin, Edwinson, Adam, Veerabadhran-Gurunathan, Sakteesh, Jawahir, Selina, Calland, Jessica K, Mourkas, Evangelos, Patel, Robin, Wiens, Terra, Decuir, Marijke, Boxrud, David, Smith, Kirk, Parker, Craig T, Farrugia, Gianrico, Zhang, Qijing, Sheppard, Samuel K, Grover, Madhusudan
Published in Communications biology (30.08.2021)
Published in Communications biology (30.08.2021)
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Journal Article
Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon
Pascoe, Ben, Schiaffino, Francesca, Murray, Susan, Méric, Guillaume, Bayliss, Sion C, Hitchings, Matthew D, Mourkas, Evangelos, Calland, Jessica K, Burga, Rosa, Yori, Pablo Peñataro, Jolley, Keith A, Cooper, Kerry K, Parker, Craig T, Olortegui, Maribel Paredes, Kosek, Margaret N, Sheppard, Samuel K
Published in PLoS neglected tropical diseases (01.08.2020)
Published in PLoS neglected tropical diseases (01.08.2020)
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Journal Article
Epistasis, core-genome disharmony, and adaptation in recombining bacteria
Taylor, Aidan J, Yahara, Koji, Pascoe, Ben, Ko, Seungwon, Mageiros, Leonardos, Mourkas, Evangelos, Calland, Jessica K, Puranen, Santeri, Hitchings, Matthew D, Jolley, Keith A, Kobras, Carolin M, Bayliss, Sion, Williams, Nicola J, van Vliet, Arnoud H M, Parkhill, Julian, Maiden, Martin C J, Corander, Jukka, Hurst, Laurence D, Falush, Daniel, Keim, Paul, Didelot, Xavier, Kelly, David J, Sheppard, Samuel K
Published in mBio (29.04.2024)
Published in mBio (29.04.2024)
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Journal Article
The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species
Atterby, Clara, Mourkas, Evangelos, Méric, Guillaume, Pascoe, Ben, Wang, Helen, Waldenström, Jonas, Sheppard, Samuel K, Olsen, Björn, Järhult, Josef D, Ellström, Patrik
Published in Frontiers in microbiology (29.03.2018)
Published in Frontiers in microbiology (29.03.2018)
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Journal Article
Spatiotemporal Investigation of Antibiotic Resistance in the Urban Water Cycle Influenced by Environmental and Anthropogenic Activity
Tucker, Keira, Mageiros, Leonardos, Carstens, Alno, Bröcker, Ludwig, Archer, Edward, Smith, Katrin, Mourkas, Evangelos, Pascoe, Ben, Nel, Daan, Meric, Guillaume, Sheppard, Samuel K, Kasprzyk-Hordern, Barbara, Botes, Marelize, Feil, Edward J, Wolfaardt, Gideon
Published in Microbiology spectrum (26.10.2022)
Published in Microbiology spectrum (26.10.2022)
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Journal Article
Genomic resistant determinants of multidrug-resistant Campylobacter spp. isolates in Peru
Schiaffino, Francesca, Parker, Craig T., Paredes Olortegui, Maribel, Pascoe, Ben, Manzanares Villanueva, Katia, Garcia Bardales, Paul F., Mourkas, Evangelos, Huynh, Steven, Peñataro Yori, Pablo, Romaina Cachique, Lucero, Gray, Hannah K., Salvatierra, Guillermo, Silva Delgado, Hermann, Sheppard, Samuel K., Cooper, Kerry K., Kosek, Margaret N.
Published in Journal of global antimicrobial resistance. (01.03.2024)
Published in Journal of global antimicrobial resistance. (01.03.2024)
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Journal Article
Genomic tailoring of autogenous poultry vaccines to reduce Campylobacter from farm to fork
Calland, Jessica K, Pesonen, Maiju E, Mehat, Jai, Pascoe, Ben, Haydon, David J, Lourenco, Jose, Lukasiewicz, Barbara, Mourkas, Evangelos, Hitchings, Matthew D, La Ragione, Roberto M, Hammond, Philip, Wallis, Timothy S, Corander, Jukka, Sheppard, Samuel K
Published in npj vaccines (12.06.2024)
Published in npj vaccines (12.06.2024)
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Journal Article
Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease
Mourkas, Evangelos, Florez‐Cuadrado, Diego, Pascoe, Ben, Calland, Jessica K., Bayliss, Sion C., Mageiros, Leonardos, Méric, Guillaume, Hitchings, Matthew D., Quesada, Alberto, Porrero, Concepción, Ugarte‐Ruiz, María, Gutiérrez‐Fernández, José, Domínguez, Lucas, Sheppard, Samuel K.
Published in Environmental microbiology (01.12.2019)
Published in Environmental microbiology (01.12.2019)
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Journal Article
Genome-wide identification of host-segregating SNPs for source attribution of clinical Campylobacter coli isolates
Lehours, Philippe, Jehanne, Quentin, Pascoe, Ben, Benejat, Lucie, Ducournau, Astrid, Mourkas, Evangelos, Mégraud, Francis, Bessède, Emilie, Sheppard, Samuel K
Published in Applied and environmental microbiology (09.11.2020)
Published in Applied and environmental microbiology (09.11.2020)
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Journal Article
Lineage‐specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group
Méric, Guillaume, Mageiros, Leonardos, Pascoe, Ben, Woodcock, Dan J., Mourkas, Evangelos, Lamble, Sarah, Bowden, Rory, Jolley, Keith A., Raymond, Ben, Sheppard, Samuel K.
Published in Molecular ecology (01.04.2018)
Published in Molecular ecology (01.04.2018)
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Journal Article
Genome-Wide Identification of Host-Segregating Single-Nucleotide Polymorphisms for Source Attribution of Clinical Campylobacter coli Isolates
Jehanne, Quentin, Pascoe, Ben, Bénéjat, Lucie, Ducournau, Astrid, Buissonnière, Alice, Mourkas, Evangelos, Mégraud, Francis, Bessède, Emilie, Sheppard, Samuel K, Lehours, Philippe
Published in Applied and environmental microbiology (24.11.2020)
Published in Applied and environmental microbiology (24.11.2020)
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Journal Article
Proximity to humans is associated with antimicrobial-resistant enteric pathogens in wild bird microbiomes
Mourkas, Evangelos, Valdebenito, José O., Marsh, Hannah, Hitchings, Matthew D., Cooper, Kerry K., Parker, Craig T., Székely, Tamás, Johansson, Håkan, Ellström, Patrik, Pascoe, Ben, Waldenström, Jonas, Sheppard, Samuel K.
Published in Current biology (09.09.2024)
Published in Current biology (09.09.2024)
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