Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution
Khoddami, Vahid, Yerra, Archana, Mosbruger, Timothy L., Fleming, Aaron M., Burrows, Cynthia J., Cairns, Bradley R.
Published in Proceedings of the National Academy of Sciences - PNAS (02.04.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (02.04.2019)
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Journal Article
Exosome-delivered microRNAs modulate the inflammatory response to endotoxin
Alexander, Margaret, Hu, Ruozhen, Runtsch, Marah C, Kagele, Dominique A, Mosbruger, Timothy L, Tolmachova, Tanya, Seabra, Miguel C, Round, June L, Ward, Diane M, O'Connell, Ryan M
Published in Nature communications (18.06.2015)
Published in Nature communications (18.06.2015)
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Journal Article
The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment
Mollaoglu, Gurkan, Jones, Alex, Wait, Sarah J., Mukhopadhyay, Anandaroop, Jeong, Sangmin, Arya, Rahul, Camolotto, Soledad A., Mosbruger, Timothy L., Stubben, Chris J., Conley, Christopher J., Bhutkar, Arjun, Vahrenkamp, Jeffery M., Berrett, Kristofer C., Cessna, Melissa H., Lane, Thomas E., Witt, Benjamin L., Salama, Mohamed E., Gertz, Jason, Jones, Kevin B., Snyder, Eric L., Oliver, Trudy G.
Published in Immunity (Cambridge, Mass.) (16.10.2018)
Published in Immunity (Cambridge, Mass.) (16.10.2018)
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Journal Article
A Stat1 bound enhancer promotes Nampt expression and function within tumor associated macrophages
Huffaker, Thomas B, Ekiz, H Atakan, Barba, Cindy, Lee, Soh-Hyun, Runtsch, Marah C, Nelson, Morgan C, Bauer, Kaylyn M, Tang, William W, Mosbruger, Timothy L, Cox, James E, Round, June L, Voth, Warren P, O'Connell, Ryan M
Published in Nature communications (11.05.2021)
Published in Nature communications (11.05.2021)
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Journal Article
Genome-Wide CRISPR-Cas9 Screen Identifies MicroRNAs That Regulate Myeloid Leukemia Cell Growth
Wallace, Jared, Hu, Ruozhen, Mosbruger, Timothy L, Dahlem, Timothy J, Stephens, W Zac, Rao, Dinesh S, Round, June L, O'Connell, Ryan M
Published in PloS one (15.04.2016)
Published in PloS one (15.04.2016)
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Journal Article
FoxA1 and FoxA2 drive gastric differentiation and suppress squamous identity in NKX2-1-negative lung cancer
Camolotto, Soledad A, Pattabiraman, Shrivatsav, Mosbruger, Timothy L, Jones, Alex, Belova, Veronika K, Orstad, Grace, Streiff, Mitchell, Salmond, Lydia, Stubben, Chris, Kaestner, Klaus H, Snyder, Eric L
Published in eLife (26.11.2018)
Published in eLife (26.11.2018)
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Journal Article
Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile
Dehghanizadeh, Somaye, Khoddami, Vahid, Mosbruger, Timothy L, Hammoud, Sue S, Edes, Kornelia, Berry, Therese S, Done, Michelle, Samowitz, Wade S, DiSario, James A, Luba, Daniel G, Burt, Randall W, Jones, David A
Published in PloS one (28.03.2018)
Published in PloS one (28.03.2018)
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Journal Article
MEK Inhibitors Reverse Growth of Embryonal Brain Tumors Derived from Oligoneural Precursor Cells
Modzelewska, Katarzyna, Boer, Elena F., Mosbruger, Timothy L., Picard, Daniel, Anderson, Daniela, Miles, Rodney R., Kroll, Mitchell, Oslund, William, Pysher, Theodore J., Schiffman, Joshua D., Jensen, Randy, Jette, Cicely A., Huang, Annie, Stewart, Rodney A.
Published in Cell reports (Cambridge) (25.10.2016)
Published in Cell reports (Cambridge) (25.10.2016)
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Journal Article
A combination of HLA-DP α and β chain polymorphisms paired with a SNP in the DPB1 3' UTR region, denoting expression levels, are associated with atopic dermatitis
Margolis, David J, Duke, Jamie L, Mitra, Nandita, Berna, Ronald A, Hoffstad, Ole J, Wasserman, Jenna R, Dinou, Amalia, Damianos, Georgios, Kotsopoulou, Ioanna, Tairis, Nikolaos, Ferriola, Deborah A, Mosbruger, Timothy L, Hayeck, Tristan J, Yan, Albert C, Monos, Dimitri S
Published in Frontiers in genetics (2023)
Published in Frontiers in genetics (2023)
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Journal Article
Large-Scale Candidate Gene Analysis of Spontaneous Clearance of Hepatitis C Virus
Mosbruger, Timothy L., Duggal, Priya, Goedert, James J., Kirk, Gregory D., Hoots, W. Keith, Tobler, Leslie H., Busch, Michael, Peters, Marion G., Rosen, Hugo R., Thomas, David L., Thio, Chloe L.
Published in The Journal of infectious diseases (01.05.2010)
Published in The Journal of infectious diseases (01.05.2010)
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Journal Article
Cytotoxic T-Lymphocyte Antigen 4 Gene and Recovery from Hepatitis B Virus Infection
THIO, Chloe L, MOSBRUGER, Timothy L, KASLOW, Richard A, KARP, Christopher L, STRATHDEE, Steffanie A, VLAHOV, David, O'BRIEN, Stephen J, ASTEMBORSKI, Jacquie, THOMAS, David L
Published in Journal of Virology (01.10.2004)
Published in Journal of Virology (01.10.2004)
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Journal Article
MYC Drives Progression of Small Cell Lung Cancer to a Variant Neuroendocrine Subtype with Vulnerability to Aurora Kinase Inhibition
Mollaoglu, Gurkan, Guthrie, Matthew R., Böhm, Stefanie, Brägelmann, Johannes, Can, Ismail, Ballieu, Paul M., Marx, Annika, George, Julie, Heinen, Christine, Chalishazar, Milind D., Cheng, Haixia, Ireland, Abbie S., Denning, Kendall E., Mukhopadhyay, Anandaroop, Vahrenkamp, Jeffery M., Berrett, Kristofer C., Mosbruger, Timothy L., Wang, Jun, Kohan, Jessica L., Salama, Mohamed E., Witt, Benjamin L., Peifer, Martin, Thomas, Roman K., Gertz, Jason, Johnson, Jane E., Gazdar, Adi F., Wechsler-Reya, Robert J., Sos, Martin L., Oliver, Trudy G.
Published in Cancer cell (13.02.2017)
Published in Cancer cell (13.02.2017)
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Journal Article
Utilizing nanopore sequencing technology for the rapid and comprehensive characterization of eleven HLA loci; addressing the need for deceased donor expedited HLA typing
Mosbruger, Timothy L., Dinou, Amalia, Duke, Jamie L., Ferriola, Deborah, Mehler, Hilary, Pagkrati, Ioanna, Damianos, Georgios, Mbunwe, Eric, Sarmady, Mahdi, Lyratzakis, Ioannis, Tishkoff, Sarah A., Dinh, Anh, Monos, Dimitri S.
Published in Human immunology (01.08.2020)
Published in Human immunology (01.08.2020)
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Journal Article
miR-155 promotes FLT3-ITD–induced myeloproliferative disease through inhibition of the interferon response
Wallace, Jared A., Kagele, Dominique A., Eiring, Anna M., Kim, Carissa N., Hu, Ruozhen, Runtsch, Marah C., Alexander, Margaret, Huffaker, Thomas B., Lee, Soh-Hyun, Patel, Ami B., Mosbruger, Timothy L., Voth, Warren P., Rao, Dinesh S., Miles, Rodney R., Round, June L., Deininger, Michael W., O'Connell, Ryan M.
Published in Blood (08.06.2017)
Published in Blood (08.06.2017)
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Journal Article
Ancestry adjustment improves genome-wide estimates of regional intolerance
Hayeck, Tristan J, Stong, Nicholas, Baugh, Evan, Dhindsa, Ryan, Turner, Tychele N, Malakar, Ayan, Mosbruger, Timothy L, Shaw, Grace Tzun-Wen, Duan, Yuncheng, Ionita-Laza, Iuliana, Goldstein, David, Allen, Andrew S
Published in Genetics (Austin) (31.05.2022)
Published in Genetics (Austin) (31.05.2022)
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Journal Article
Genomic characterization of HLA class I and class II genes in ethnically diverse sub‐Saharan African populations: A report on novel HLA alleles
Pagkrati, Ioanna, Duke, Jamie L., Mbunwe, Eric, Mosbruger, Timothy L., Ferriola, Deborah, Wasserman, Jenna, Dinou, Amalia, Tairis, Nikolaos, Damianos, Georgios, Kotsopoulou, Ioanna, Papaioannou, Joanna, Giannopoulos, Diamantoula, Beggs, William, Nyambo, Thomas, Mpoloka, Sununguko W., Mokone, Gaonyadiwe G., Njamnshi, Alfred K., Fokunang, Charles, Woldemeskel, Dawit, Belay, Gurja, Maiers, Martin, Tishkoff, Sarah A., Monos, Dimitri S.
Published in HLA (01.08.2023)
Published in HLA (01.08.2023)
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Journal Article
Resolving MiSeq-Generated Ambiguities in HLA-DPB1 Typing by Using the Oxford Nanopore Technology
Duke, Jamie L., Mosbruger, Timothy L., Ferriola, Deborah, Chitnis, Nilesh, Hu, Taishan, Tairis, Nikolaos, Margolis, David J., Monos, Dimitri S.
Published in The Journal of molecular diagnostics : JMD (01.09.2019)
Published in The Journal of molecular diagnostics : JMD (01.09.2019)
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Journal Article
Genomic characterization of MICA gene using multiple next generation sequencing platforms: A validation study
Zou, Yizhou, Duke, Jamie L., Ferriola, Deborah, Luo, Qizhi, Wasserman, Jenna, Mosbruger, Timothy L., Luo, Weiguang, Cai, Liang, Zou, Kevin, Tairis, Nikolaos, Damianos, Georgios, Pagkrati, Ioanna, Kukuruga, Debra, Huang, Yanping, Monos, Dimitri S.
Published in HLA (01.10.2020)
Published in HLA (01.10.2020)
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Journal Article
The Impact of Patterns in Linkage Disequilibrium and Sequencing Quality on the Imprint of Balancing Selection
Hayeck, Tristan J, Li, Yang, Mosbruger, Timothy L, Bradfield, Jonathan P, Gleason, Adam G, Damianos, George, Shaw, Grace Tzun-Wen, Duke, Jamie L, Conlin, Laura K, Turner, Tychele N, Fernández-Viña, Marcelo A, Sarmady, Mahdi, Monos, Dimitri S
Published in Genome biology and evolution (01.02.2024)
Published in Genome biology and evolution (01.02.2024)
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Journal Article
A comparison of deep sequencing of TCRG rearrangements vs traditional capillary electrophoresis for assessment of clonality in T-Cell lymphoproliferative disorders
Schumacher, Jonathan A, Duncavage, Eric J, Mosbruger, Timothy L, Szankasi, Philippe M, Kelley, Todd W
Published in American journal of clinical pathology (01.03.2014)
Published in American journal of clinical pathology (01.03.2014)
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Journal Article