Analysis, optimization and verification of Illumina-generated 16S rRNA gene amplicon surveys
Nelson, Michael C, Morrison, Hilary G, Benjamino, Jacquelynn, Grim, Sharon L, Graf, Joerg
Published in PloS one (01.04.2014)
Published in PloS one (01.04.2014)
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Journal Article
A filtering method to generate high quality short reads using illumina paired-end technology
Eren, A Murat, Vineis, Joseph H, Morrison, Hilary G, Sogin, Mitchell L
Published in PloS one (17.06.2013)
Published in PloS one (17.06.2013)
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Journal Article
Ironing out the wrinkles in the rare biosphere through improved OTU clustering
Huse, Susan M., Welch, David Mark, Morrison, Hilary G., Sogin, Mitchell L.
Published in Environmental microbiology (01.07.2010)
Published in Environmental microbiology (01.07.2010)
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Journal Article
Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
Eren, A Murat, Morrison, Hilary G, Lescault, Pamela J, Reveillaud, Julie, Vineis, Joseph H, Sogin, Mitchell L
Published in The ISME Journal (17.03.2015)
Published in The ISME Journal (17.03.2015)
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Journal Article
Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data
Eren, A. Murat, Maignien, Loïs, Sul, Woo Jun, Murphy, Leslie G., Grim, Sharon L., Morrison, Hilary G., Sogin, Mitchell L., Freckleton, Robert
Published in Methods in ecology and evolution (01.12.2013)
Published in Methods in ecology and evolution (01.12.2013)
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Journal Article
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
Shaiber, Alon, Willis, Amy D, Delmont, Tom O, Roux, Simon, Chen, Lin-Xing, Schmid, Abigail C, Yousef, Mahmoud, Watson, Andrea R, Lolans, Karen, Esen, Özcan C, Lee, Sonny T M, Downey, Nora, Morrison, Hilary G, Dewhirst, Floyd E, Mark Welch, Jessica L, Eren, A Murat
Published in Genome Biology (16.12.2020)
Published in Genome Biology (16.12.2020)
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Journal Article
Maternal diet during pregnancy is related with the infant stool microbiome in a delivery mode-dependent manner
Lundgren, Sara N, Madan, Juliette C, Emond, Jennifer A, Morrison, Hilary G, Christensen, Brock C, Karagas, Margaret R, Hoen, Anne G
Published in Microbiome (05.07.2018)
Published in Microbiome (05.07.2018)
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Journal Article
Sewage reflects the microbiomes of human populations
Newton, Ryan J, McLellan, Sandra L, Dila, Deborah K, Vineis, Joseph H, Morrison, Hilary G, Eren, A Murat, Sogin, Mitchell L
Published in mBio (24.02.2015)
Published in mBio (24.02.2015)
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Journal Article
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
Adey, Andrew, Morrison, Hilary G, Asan, Xun, Xu, Kitzman, Jacob O, Turner, Emily H, Stackhouse, Bethany, MacKenzie, Alexandra P, Caruccio, Nicholas C, Zhang, Xiuqing, Shendure, Jay
Published in Genome biology (08.12.2010)
Published in Genome biology (08.12.2010)
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Journal Article
The premature infant gut microbiome during the first 6 weeks of life differs based on gestational maturity at birth
Chernikova, Diana A., Madan, Juliette C., Housman, Molly L., Zain-ul-abideen, Muhammad, Lundgren, Sara N., Morrison, Hilary G., Sogin, Mitchell L., Williams, Scott M., Moore, Jason H., Karagas, Margaret R., Hoen, Anne G.
Published in Pediatric research (01.07.2018)
Published in Pediatric research (01.07.2018)
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Journal Article
Accuracy and quality of massively parallel DNA pyrosequencing
Huse, Susan M, Huber, Julie A, Morrison, Hilary G, Sogin, Mitchell L, Welch, David Mark
Published in Genome biology (20.07.2007)
Published in Genome biology (20.07.2007)
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Journal Article
High molecular weight DNA extraction strategies for long‐read sequencing of complex metagenomes
Trigodet, Florian, Lolans, Karen, Fogarty, Emily, Shaiber, Alon, Morrison, Hilary G., Barreiro, Luis, Jabri, Bana, Eren, A. Murat
Published in Molecular ecology resources (01.07.2022)
Published in Molecular ecology resources (01.07.2022)
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Journal Article
Microbial Diversity in the Deep Sea and the Underexplored "Rare Biosphere"
Sogin, Mitchell L., Morrison, Hilary G., Huber, Julie A., Welch, David Mark, Huse, Susan M., Neal, Phillip R., Arrieta, Jesus M., Herndl, Gerhard J.
Published in Proceedings of the National Academy of Sciences - PNAS (08.08.2006)
Published in Proceedings of the National Academy of Sciences - PNAS (08.08.2006)
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Journal Article
A single genus in the gut microbiome reflects host preference and specificity
Eren, A Murat, Sogin, Mitchell L, Morrison, Hilary G, Vineis, Joseph H, Fisher, Jenny C, Newton, Ryan J, McLellan, Sandra L
Published in The ISME Journal (01.01.2015)
Published in The ISME Journal (01.01.2015)
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Journal Article
VAMPS: a website for visualization and analysis of microbial population structures
Huse, Susan M, Mark Welch, David B, Voorhis, Andy, Shipunova, Anna, Morrison, Hilary G, Eren, A Murat, Sogin, Mitchell L
Published in BMC bioinformatics (05.02.2014)
Published in BMC bioinformatics (05.02.2014)
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Journal Article
Microbial Population Structures in the Deep Marine Biosphere
Huber, Julie A, Welch, David B. Mark, Morrison, Hilary G, Huse, Susan M, Neal, Phillip R, Butterfield, David A, Sogin, Mitchell L
Published in Science (American Association for the Advancement of Science) (05.10.2007)
Published in Science (American Association for the Advancement of Science) (05.10.2007)
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Journal Article
The infant gut resistome is associated with E. coli and early-life exposures
Lebeaux, Rebecca M, Coker, Modupe O, Dade, Erika F, Palys, Thomas J, Morrison, Hilary G, Ross, Benjamin D, Baker, Emily R, Karagas, Margaret R, Madan, Juliette C, Hoen, Anne G
Published in BMC microbiology (02.07.2021)
Published in BMC microbiology (02.07.2021)
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Journal Article
Analysis of Lung Microbiota in Bronchoalveolar Lavage, Protected Brush and Sputum Samples from Subjects with Mild-To-Moderate Cystic Fibrosis Lung Disease
Hogan, Deborah A, Willger, Sven D, Dolben, Emily L, Hampton, Thomas H, Stanton, Bruce A, Morrison, Hilary G, Sogin, Mitchell L, Czum, Julianna, Ashare, Alix
Published in PloS one (04.03.2016)
Published in PloS one (04.03.2016)
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