Characterizing the Cell-Free Transcriptome in a Humanized Diffuse Large B-Cell Lymphoma Patient-Derived Tumor Xenograft Model for RNA-Based Liquid Biopsy in a Preclinical Setting
Decruyenaere, Philippe, Daneels, Willem, Morlion, Annelien, Verniers, Kimberly, Anckaert, Jasper, Tavernier, Jan, Offner, Fritz, Vandesompele, Jo
Published in International journal of molecular sciences (16.09.2024)
Published in International journal of molecular sciences (16.09.2024)
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Journal Article
Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome
Van Paemel, Ruben, De Koker, Andries, Caggiano, Christa, Morlion, Annelien, Mestdagh, Pieter, De Wilde, Bram, Vandesompele, Jo, De Preter, Katleen
Published in Epigenetics (03.07.2021)
Published in Epigenetics (03.07.2021)
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Journal Article
RNA biomarkers from proximal liquid biopsy for diagnosis of ovarian cancer
Hulstaert, Eva, Levanon, Keren, Morlion, Annelien, Van Aelst, Stefan, Christidis, Anthony-Alexander, Zamar, Ruben, Anckaert, Jasper, Verniers, Kimberly, Bahar-Shany, Keren, Sapoznik, Stav, Vandesompele, Jo, Mestdagh, Pieter
Published in Neoplasia (New York, N.Y.) (01.02.2022)
Published in Neoplasia (New York, N.Y.) (01.02.2022)
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Journal Article
CiLiQuant: Quantification of RNA Junction Reads Based on Their Circular or Linear Transcript Origin
Morlion, Annelien, Hulstaert, Eva, Vromman, Marieke, Anckaert, Jasper, Everaert, Celine, Vandesompele, Jo, Mestdagh, Pieter
Published in Frontiers in bioinformatics (22.02.2022)
Published in Frontiers in bioinformatics (22.02.2022)
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Journal Article
Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls
Hulstaert, Eva, Decock, Anneleen, Morlion, Annelien, Everaert, Celine, Verniers, Kimberly, Nuytens, Justine, Nijs, Nele, Schroth, Gary P., Kuersten, Scott, Gross, Stephen M., Mestdagh, Pieter, Vandesompele, Jo
Published in STAR protocols (18.06.2021)
Published in STAR protocols (18.06.2021)
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Journal Article
Candidate RNA biomarkers in biofluids for early diagnosis of ovarian cancer: A systematic review
Hulstaert, Eva, Morlion, Annelien, Levanon, Keren, Vandesompele, Jo, Mestdagh, Pieter
Published in Gynecologic oncology (01.02.2021)
Published in Gynecologic oncology (01.02.2021)
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Journal Article
Custom long non-coding RNA capture enhances detection sensitivity in different human sample types
Morlion, Annelien, Everaert, Celine, Nuytens, Justine, Hulstaert, Eva, Vandesompele, Jo, Mestdagh, Pieter
Published in RNA biology (15.10.2021)
Published in RNA biology (15.10.2021)
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Journal Article
Charting Extracellular Transcriptomes in The Human Biofluid RNA Atlas
Hulstaert, Eva, Morlion, Annelien, Avila Cobos, Francisco, Verniers, Kimberly, Nuytens, Justine, Vanden Eynde, Eveline, Yigit, Nurten, Anckaert, Jasper, Geerts, Anja, Hindryckx, Pieter, Jacques, Peggy, Brusselle, Guy, Bracke, Ken R., Maes, Tania, Malfait, Thomas, Derveaux, Thierry, Ninclaus, Virginie, Van Cauwenbergh, Caroline, Roelens, Kristien, Roets, Ellen, Hemelsoet, Dimitri, Tilleman, Kelly, Brochez, Lieve, Kuersten, Scott, Simon, Lukas M., Karg, Sebastian, Kautzky-Willers, Alexandra, Leutner, Michael, Nöhammer, Christa, Slaby, Ondrej, Prins, Roméo Willinge, Koster, Jan, Lefever, Steve, Schroth, Gary P., Vandesompele, Jo, Mestdagh, Pieter
Published in Cell reports (Cambridge) (29.12.2020)
Published in Cell reports (Cambridge) (29.12.2020)
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Journal Article
Subpar reporting of pre-analytical variables in RNA-focused blood plasma studies
Van Der Schueren, Céleste, Decruyenaere, Philippe, Avila Cobos, Francisco, Bult, Johanna, Deleu, Jill, Dipalo, Laudonia Lidia, Helsmoortel, Hetty Hilde, Hulstaert, Eva, Morlion, Annelien, Ramos Varas, Elena, Schoofs, Kathleen, Trypsteen, Wim, Vanden Eynde, Eveline, Van Droogenbroeck, Hanne, Verniers, Kimberly, Vandesompele, Jo, Decock, Anneleen
Published in Molecular oncology (02.04.2024)
Published in Molecular oncology (02.04.2024)
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Journal Article
Abstract B49: Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control study—important considerations for liquid biopsies
Decock, Anneleen, Anckaert, Jasper, Everaert, Celine, Nuytens, Justine, Kuersten, Scott, Hendrix, An, Vandesompele, Jo, Mestdagh, Pieter, Dhondt, Bert, Van Paemel, Ruben, Verniers, Kimberly, Schroth, Gary, Fierro, Carolina, Yigit, Nurten, Schoofs, Kathleen, Morlion, Annelien, Deleu, Jill, Hulstaert, Eva, Cobos, Francisco Avila, Nijs, Nele, Eynde, Eveline Vanden, Helsmoortel, Hetty Hilde, De Wever, Olivier, Philippron, Annouck
Published in Clinical cancer research (01.06.2020)
Published in Clinical cancer research (01.06.2020)
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Journal Article
Abstract PR15: Charting extracellular transcriptomes in The Human Biofluid RNA Atlas
Hulstaert, Eva, Morlion, Annelien, Cobos, Francisco Avila, Verniers, Kimberly, Nuytens, Justine, Eynde, Eveline Vanden, Yigit, Nurten, Anckaert, Jasper, Geerts, Anja, Hindryckx, Pieter, Jacques, Peggy, Brusselle, Guy, Bracke, Ken, Maes, Tania, Malfait, Thomas, Derveaux, Thierry, Ninclaus, Virginie, Van Cauwenbergh, Caroline, Roelens, Kristien, Roets, Ellen, Hemelsoet, Dimitri, Tilleman, Kelly, Brochez, Lieve, Kuersten, Scott, Simon, Lukas, Karg, Sebastian, Nöhammer, Christa, Kautzky-Willers, Alexandra, Leutner, Michael, Slaby, Ondrej, Schroth, Gary, Vandesompele, Jo, Mestdagh, Pieter
Published in Clinical cancer research (01.06.2020)
Published in Clinical cancer research (01.06.2020)
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Journal Article
Whole transcriptome profiling of liquid biopsies from tumour xenografted mouse models enables specific monitoring of tumour-derived extracellular RNA
Vermeirssen, Vanessa, Deleu, Jill, Morlion, Annelien, Everaert, Celine, De Wilde, Jilke, Anckaert, Jasper, Durinck, Kaat, Nuytens, Justine, Rishfi, Muhammad, Speleman, Frank, Van Droogenbroeck, Hanne, Verniers, Kimberly, Baietti, Maria Francesca, Albersen, Maarten, Leucci, Eleonora, Post, Edward, Best, Myron G, Van Maerken, Tom, De Wilde, Bram, Vandesompele, Jo, Decock, Anneleen
Published in NAR cancer (01.12.2022)
Published in NAR cancer (01.12.2022)
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Journal Article
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
Consortium, Exrnaqc, Anckaert, Jasper, Francisco Avila Cobos, Decock, Anneleen, Decruyenaere, Philippe, Deleu, Jill, De Preter, Katleen, De Wever, Olivier, De Wilde, Jilke, Dhondt, Bert, D'huyvetter, Thibaut, Everaert, Celine, Fierro, Carolina, Hetty Hilde Helsmoortel, Hendrix, An, Hulstaert, Eva, Koster, Jan, Kuersten, Scott, Mercer, Tim R, Mestdagh, Pieter, Morlion, Annelien, Nijs, Nele, Nuytens, Justine, Philippron, Annouck, Piofczyk, Thomas, Poma-Soto, Franco, Schoofs, Kathleen, Schroth, Gary P, Thas, Olivier, Eveline Vanden Eynde, Vandesompele, Jo, Tom Van Maerken, Ruben Van Paemel, Verniers, Kimberly, Verwilt, Jasper, Yigit, Nurten
Published in bioRxiv (27.12.2022)
Published in bioRxiv (27.12.2022)
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Paper
Charting extracellular transcriptomes in The Human Biofluid RNA Atlas
Hulstaert, Eva, Morlion, Annelien, Francisco Avila Cobos, Verniers, Kimberly, Nuytens, Justine, Eveline Vanden Eynde, Yigit, Nurten, Anckaert, Jasper, Geerts, Anja, Hindryckx, Pieter, Jacques, Peggy, Brusselle, Guy, Bracke, Ken R, Maes, Tania, Malfait, Thomas, Derveaux, Thierry, Ninclaus, Virginie, Caroline Van Cauwenbergh, Roelens, Kristien, Roets, Ellen, Hemelsoet, Dimitri, Tilleman, Kelly, Brochez, Lieve, Kuersten, Scott, Lukas, Simon, Karg, Sebastian, Kautzky-Willers, Alexandra, Leutner, Michael, Nöhammer, Christa, Slaby, Ondrej, Prins, Romeo Willinge, Koster, Jan, Lefever, Steve, Schroth, Gary P, Vandesompele, Jo, Mestdagh, Pieter
Published in bioRxiv (04.05.2020)
Published in bioRxiv (04.05.2020)
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