Molecular architecture of the Bardet–Biedl syndrome protein 2-7-9 subcomplex
Ludlam, W. Grant, Aoba, Takuma, Cuéllar, Jorge, Bueno-Carrasco, M. Teresa, Makaju, Aman, Moody, James D., Franklin, Sarah, Valpuesta, José M., Willardson, Barry M.
Published in The Journal of biological chemistry (01.11.2019)
Published in The Journal of biological chemistry (01.11.2019)
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Journal Article
Crystals of TELSAM-target protein fusions that exhibit minimal crystal contacts and lack direct inter-TELSAM contacts
Nawarathnage, Supeshala, Soleimani, Sara, Mathis, Moriah H, Bezzant, Braydan D, Ramírez, Diana T, Gajjar, Parag, Bunn, Derick R, Stewart, Cameron, Smith, Tobin, Pedroza Romo, Maria J, Brown, Seth, Doukov, Tzanko, Moody, James D
Published in Open biology (01.03.2022)
Published in Open biology (01.03.2022)
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Journal Article
Surrogate Wnt agonists that phenocopy canonical Wnt and β-catenin signalling
Janda, Claudia Y., Dang, Luke T., You, Changjiang, Chang, Junlei, de Lau, Wim, Zhong, Zhendong A., Yan, Kelley S., Marecic, Owen, Siepe, Dirk, Li, Xingnan, Moody, James D., Williams, Bart O., Clevers, Hans, Piehler, Jacob, Baker, David, Kuo, Calvin J., Garcia, K. Christopher
Published in Nature (London) (11.05.2017)
Published in Nature (London) (11.05.2017)
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Journal Article
Computational engineering of previously crystallized pyruvate formate-lyase activating enzyme reveals insights into SAM binding and reductive cleavage
Moody, James D., Hill, Sarah, Lundahl, Maike N., Saxton, Aubrianna J., Galambas, Amanda, Broderick, William E., Lawrence, C. Martin, Broderick, Joan B.
Published in The Journal of biological chemistry (01.06.2023)
Published in The Journal of biological chemistry (01.06.2023)
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Journal Article
The B12-independent glycerol dehydratase activating enzyme from Clostridium butyricum cleaves SAM to produce 5′-deoxyadenosine and not 5′-deoxy-5′-(methylthio)adenosine
Walls, William G., Moody, James D., McDaniel, Elizabeth C., Villanueva, Maria, Shepard, Eric M., Broderick, William E., Broderick, Joan B.
Published in Journal of inorganic biochemistry (01.02.2022)
Published in Journal of inorganic biochemistry (01.02.2022)
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Journal Article
Fusion crystallization reveals the behavior of both the 1TEL crystallization chaperone and the TNK1 UBA domain
Nawarathnage, Supeshala, Tseng, Yi Jie, Soleimani, Sara, Smith, Tobin, Pedroza Romo, Maria J, Abiodun, Wisdom O, Egbert, Christina M, Madhusanka, Deshan, Bunn, Derick, Woods, Bridger, Tsubaki, Evan, Stewart, Cameron, Brown, Seth, Doukov, Tzanko, Andersen, Joshua L, Moody, James D
Published in Structure (London) (07.12.2023)
Published in Structure (London) (07.12.2023)
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Journal Article
Micrococcin cysteine-to-thiazole conversion through transient interactions between the scaffolding protein TclI and the modification enzymes TclJ and TclN
Calvopina-Chavez, Diana G, Bursey, Devan M, Tseng, Yi-Jie, Patil, Leena M, Bewley, Kathryn D, Bennallack, Philip R, McPhie, Josh M, Wagstaff, Kimberly B, Daley, Anisha, Miller, Susan M, Moody, James D, Price, John C, Griffitts, Joel S
Published in Applied and environmental microbiology (18.06.2024)
Published in Applied and environmental microbiology (18.06.2024)
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Journal Article
Increasing the bulk of the 1TEL-target linker and retaining the 10×His tag in a 1TEL-CMG2-vWa construct improves crystal order and diffraction limits
Gajjar, Parag L, Pedroza Romo, Maria J, Litchfield, Celeste M, Callahan, Miles, Redd, Nathan, Nawarathnage, Supeshala, Soleimani, Sara, Averett, Jacob, Wilson, Elijah, Lewis, Andrew, Stewart, Cameron, Tseng, Yi Jie, Doukov, Tzanko, Lebedev, Andrey, Moody, James D
Published in Acta crystallographica. Section D, Biological crystallography. (01.10.2023)
Published in Acta crystallographica. Section D, Biological crystallography. (01.10.2023)
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Journal Article
First critical repressive H3K27me3 marks in embryonic stem cells identified using designed protein inhibitor
Moody, James D., Levy, Shiri, Mathieu, Julie, Xing, Yalan, Kim, Woojin, Dong, Cheng, Tempel, Wolfram, Robitaille, Aaron M., Dang, Luke T., Ferreccio, Amy, Detraux, Damien, Sidhu, Sonia, Zhu, Licheng, Carter, Lauren, Xu, Chao, Valensisi, Cristina, Wang, Yuliang, Hawkins, R. David, Min, Jinrong, Moon, Randall T., Orkin, Stuart H., Baker, David, Ruohola-Baker, Hannele
Published in Proceedings of the National Academy of Sciences - PNAS (19.09.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (19.09.2017)
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Journal Article
Quantifying In Situ Structural Stabilities of Human Blood Plasma Proteins Using a Novel Iodination Protein Stability Assay
Lin, Hsien-Jung L., James, Isabella, Hyer, Chad D., Haderlie, Connor T., Zackrison, Michael J., Bateman, Tyler M., Berg, Monica, Park, Ji-Sun, Daley, S. Anisha, Zuniga Pina, Nathan R., Tseng, Yi-Jie J., Moody, James D., Price, John C.
Published in Journal of proteome research (02.12.2022)
Published in Journal of proteome research (02.12.2022)
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Journal Article
Zyxin-VASP interactions alter actin regulatory activity in zyxin-VASP complexes
Grange, Jacob, Moody, James, Ascione, Marc, Hansen, Marc
Published in Cellular & molecular biology letters (01.03.2013)
Published in Cellular & molecular biology letters (01.03.2013)
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Journal Article
Structural characterization of capillary morphogenesis gene 2 inhibitors
Soleimani, Sara, Moody, James D.
Published in Acta crystallographica. Section A, Foundations and advances (20.07.2019)
Published in Acta crystallographica. Section A, Foundations and advances (20.07.2019)
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Journal Article
The B 12 -independent glycerol dehydratase activating enzyme from Clostridium butyricum cleaves SAM to produce 5'-deoxyadenosine and not 5'-deoxy-5'-(methylthio)adenosine
Walls, William G, Moody, James D, McDaniel, Elizabeth C, Villanueva, Maria, Shepard, Eric M, Broderick, William E, Broderick, Joan B
Published in Journal of inorganic biochemistry (01.02.2022)
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Published in Journal of inorganic biochemistry (01.02.2022)
Journal Article
Crystals of $\mathrm{TELSAM}$–target protein fusions that exhibit minimal crystal contacts and lack direct inter-$\mathrm{TELSAM}$ contacts
Nawarathnage, Supeshala, Soleimani, Sara, Mathis, Moriah H., Bezzant, Braydan D., Ramírez, Diana T., Gajjar, Parag, Bunn, Derick R., Stewart, Cameron, Smith, Tobin, Pedroza Romo, Maria J., Brown, Seth, Doukov, Tzanko, Moody, James D.
Published in Open biology (02.03.2022)
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Published in Open biology (02.03.2022)
Journal Article
Surrogate Wnt agonists that phenocopy canonical Wnt and -catenin signalling
Janda, Claudia Y, Dang, Luke T, You, Changjiang, Chang, Junlei, de Lau, Wim, Zhong, Zhendong A, Yan, Kelley S, Marecic, Owen, Siepe, Dirk, Li, Xingnan, Moody, James D, Williams, Bart O, Clevers, Hans, Piehler, Jacob, Baker, David, Kuo, Calvin J, Garcia, K. Christopher
Published in Nature (London) (11.05.2017)
Published in Nature (London) (11.05.2017)
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Journal Article
Micrococcin cysteine-to-thiazole conversion through transient interactions between a scaffolding protein and two modification enzymes
Calvopina-Chavez, Diana G, Bursey, Devan M, Tseng, Yi-Jie, Patil, Leena M, Bewley, Kathryn D, Bennallack, Philip R, McPhie, Josh M, Wagstaff, Kimberly B, Daley, Anisha, Miller, Susan M, Moody, James D, Price, John C, Griffitts, Joel S
Published in bioRxiv : the preprint server for biology (23.10.2023)
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Published in bioRxiv : the preprint server for biology (23.10.2023)
Journal Article
Fusion crystallization reveals the behavior of both the 1TEL crystallization chaperone and the TNK1 UBA domain
Nawarathnage, Supeshala, Tseng, Yi Jie, Soleimani, Sara, Smith, Tobin, Romo, Maria J Pedroza, Abiodun, Wisdom Oshireku, Egbert, Christina M, Madhusanka, Deshan, Bunn, Derick, Woods, Bridger, Tsubaki, Evan, Stewart, Cameron, Brown, Seth, Doukov, Tzanko, Andersen, Joshua L, Moody, James D
Published in bioRxiv : the preprint server for biology (14.06.2023)
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Published in bioRxiv : the preprint server for biology (14.06.2023)
Journal Article
Decreasing the flexibility of the TELSAM-target protein linker and omitting the cleavable fusion tag improves crystal order and diffraction limits
Gajjar, Parag L, Romo, Maria J Pedroza, Litchfield, Celeste M, Callahan, Miles, Redd, Nathan, Nawarathnage, Supeshala, Soleimani, Sara, Averett, Jacob, Wilson, Elijah, Lewis, Andrew, Stewart, Cameron, Tseng, Yi-Jie J, Doukov, Tzanko, Lebedev, Andrey, Moody, James D
Published in bioRxiv : the preprint server for biology (15.05.2023)
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Published in bioRxiv : the preprint server for biology (15.05.2023)
Journal Article