Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs
Zhou, Chan, Molinie, Benoit, Daneshvar, Kaveh, Pondick, Joshua V., Wang, Jinkai, Van Wittenberghe, Nicholas, Xing, Yi, Giallourakis, Cosmas C., Mullen, Alan C.
Published in Cell reports (Cambridge) (29.08.2017)
Published in Cell reports (Cambridge) (29.08.2017)
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Transcription factor trapping by RNA in gene regulatory elements
Sigova, Alla A., Abraham, Brian J., Ji, Xiong, Molinie, Benoit, Hannett, Nancy M., Guo, Yang Eric, Jangi, Mohini, Giallourakis, Cosmas C., Sharp, Phillip A., Young, Richard A.
Published in Science (American Association for the Advancement of Science) (20.11.2015)
Published in Science (American Association for the Advancement of Science) (20.11.2015)
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Genetic drivers of m6A methylation in human brain, lung, heart and muscle
Xiong, Xushen, Hou, Lei, Park, Yongjin P., Molinie, Benoit, Gregory, Richard I., Kellis, Manolis
Published in Nature genetics (01.08.2021)
Published in Nature genetics (01.08.2021)
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Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells
Sigova, Alla A., Mullen, Alan C., Molinie, Benoit, Gupta, Sumeet, Orlando, David A., Guenther, Matthew G., Almada, Albert E., Lin, Charles, Sharp, Phillip A., Giallourakis, Cosmas C., Young, Richard A.
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (19.02.2013)
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m6A RNA Modification Controls Cell Fate Transition in Mammalian Embryonic Stem Cells
Batista, Pedro J., Molinie, Benoit, Wang, Jinkai, Qu, Kun, Zhang, Jiajing, Li, Lingjie, Bouley, Donna M., Lujan, Ernesto, Haddad, Bahareh, Daneshvar, Kaveh, Carter, Ava C., Flynn, Ryan A., Zhou, Chan, Lim, Kok-Seong, Dedon, Peter, Wernig, Marius, Mullen, Alan C., Xing, Yi, Giallourakis, Cosmas C., Chang, Howard Y.
Published in Cell stem cell (01.12.2014)
Published in Cell stem cell (01.12.2014)
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Chromatin Stability at Low Concentration Depends on Histone Octamer Saturation Levels
Hagerman, Thomas A., Fu, Qiang, Molinié, Benoit, Denvir, James, Lindsay, Stuart, Georgel, Philippe T.
Published in Biophysical journal (04.03.2009)
Published in Biophysical journal (04.03.2009)
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m(6)A-LAIC-seq reveals the census and complexity of the m(6)A epitranscriptome
Molinie, Benoit, Wang, Jinkai, Lim, Kok Seong, Hillebrand, Roman, Lu, Zhi-Xiang, Van Wittenberghe, Nicholas, Howard, Benjamin D, Daneshvar, Kaveh, Mullen, Alan C, Dedon, Peter, Xing, Yi, Giallourakis, Cosmas C
Published in Nature methods (01.08.2016)
Published in Nature methods (01.08.2016)
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m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells
Batista, Pedro J, Molinie, Benoit, Wang, Jinkai, Qu, Kun, Zhang, Jiajing, Li, Lingjie, Bouley, Donna M, Lujan, Ernesto, Haddad, Bahareh, Daneshvar, Kaveh, Carter, Ava C, Flynn, Ryan A, Zhou, Chan, Lim, Kok-Seong, Dedon, Peter, Wernig, Marius, Mullen, Alan C, Xing, Yi, Giallourakis, Cosmas C, Chang, Howard Y
Published in Cell stem cell (04.12.2014)
Published in Cell stem cell (04.12.2014)
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Genetic drivers of m.sup.6A methylation in human brain, lung, heart and muscle
Xiong, Xushen, Hou, Lei, Park, Yongjin P, Molinie, Benoit, Ardlie, Kristin G, Aguet, François
Published in Nature genetics (01.08.2021)
Published in Nature genetics (01.08.2021)
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Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease
Hou, Lei, Xiong, Xushen, Park, Yongjin, Boix, Carles, James, Benjamin, Sun, Na, He, Liang, Patel, Aman, Zhang, Zhizhuo, Molinie, Benoit, Van Wittenberghe, Nicholas, Steelman, Scott, Nusbaum, Chad, Aguet, François, Ardlie, Kristin G., Kellis, Manolis
Published in Nature genetics (01.10.2023)
Published in Nature genetics (01.10.2023)
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Genome-wide Translocation Sequencing Reveals Mechanisms of Chromosome Breaks and Rearrangements in B Cells
Chiarle, Roberto, Zhang, Yu, Frock, Richard L., Lewis, Susanna M., Molinie, Benoit, Ho, Yu-Jui, Myers, Darienne R., Choi, Vivian W., Compagno, Mara, Malkin, Daniel J., Neuberg, Donna, Monti, Stefano, Giallourakis, Cosmas C., Gostissa, Monica, Alt, Frederick W.
Published in Cell (30.09.2011)
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Co-expression networks reveal the tissue-specific regulation of transcription and splicing
Saha, Ashis, Kim, Yungil, Gewirtz, Ariel D H, Jo, Brian, Gao, Chuan, McDowell, Ian C, Engelhardt, Barbara E, Battle, Alexis
Published in Genome research (01.11.2017)
Published in Genome research (01.11.2017)
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Enhancing GTEx by bridging the gaps between genotype, gene expression, and disease
Stranger, Barbara E, Brigham, Lori E, Hasz, Richard, Hunter, Marcus, Johns, Christopher, Johnson, Mark, Kopen, Gene, Leinweber, William F, Lonsdale, John T, McDonald, Alisa, Mestichelli, Bernadette, Myer, Kevin, Roe, Brian, Salvatore, Michael, Shad, Saboor, Thomas, Jeffrey A, Walters, Gary, Washington, Michael, Wheeler, Joseph, Bridge, Jason, Foster, Barbara A, Gillard, Bryan M, Karasik, Ellen, Kumar, Rachna, Miklos, Mark, Moser, Michael T, Jewell, Scott D, Montroy, Robert G, Rohrer, Daniel C, Valley, Dana R, Davis, David A, Mash, Deborah C, Gould, Sarah E, Guan, Ping, Koester, Susan, Little, A Roger, Martin, Casey, Moore, Helen M, Rao, Abhi, Struewing, Jeffery P, Volpi, Simona, Hansen, Kasper D, Hickey, Peter F, Rizzardi, Lindsay F, Hou, Lei, Liu, Yaping, Molinie, Benoit, Park, Yongjin, Rinaldi, Nicola, Wang, Li, Van Wittenberghe, Nicholas, Claussnitzer, Melina, Gelfand, Ellen T, Li, Qin, Linder, Sandra, Zhang, Rui, Smith, Kevin S, Tsang, Emily K, Chen, Lin S, Demanelis, Kathryn, Doherty, Jennifer A, Jasmine, Farzana, Kibriya, Muhammad G, Jiang, Lihua, Lin, Shin, Wang, Meng, Jian, Ruiqi, Li, Xiao, Chan, Joanne, Bates, Daniel, Diegel, Morgan, Halow, Jessica, Haugen, Eric, Johnson, Audra, Kaul, Rajinder, Lee, Kristen, Maurano, Matthew T, Nelson, Jemma, Neri, Fidencio J, Sandstrom, Richard, Fernando, Marian S, Linke, Caroline, Oliva, Meritxell, Skol, Andrew, Wu, Fan, Akey, Joshua M, Feinberg, Andrew P, Li, Jin Billy, Pierce, Brandon L, Stamatoyannopoulos, John A, Tang, Hua, Ardlie, Kristin G, Kellis, Manolis, Snyder, Michael P, Montgomery, Stephen B
Published in Nature genetics (01.12.2017)
Published in Nature genetics (01.12.2017)
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Genetic drivers of m 6 A methylation in human brain, lung, heart and muscle
Xiong, Xushen, Hou, Lei, Park, Yongjin P, Molinie, Benoit, Gregory, Richard I, Kellis, Manolis
Published in Nature genetics (01.08.2021)
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Published in Nature genetics (01.08.2021)
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Su2093 - The TLR4/MyD88 Pathway Mediates Colitis-Induced Early Enteric Neurogenesis
Belkind-Gerson, Jaime, Hotta, Ryo, Jones, Kenneth l., Molinie, Benoit, Stanford, Bridget, Graham, Hannah K., Reynolds, Justin, Joncher, Raleigh, Woods, Crystal, Goldstein, Allan M.
Published in Gastroenterology (New York, N.Y. 1943) (01.04.2017)
Published in Gastroenterology (New York, N.Y. 1943) (01.04.2017)
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The TLR4/MyD88 Pathway Mediates Colitis-Induced Early Enteric Neurogenesis
Belkind-Gerson, Jaime, Hotta, Ryo, Jones, Kenneth l, Molinie, Benoit, Stanford, Bridget, Graham, Hannah K, Reynolds, Justin, Joncher, Raleigh, Woods, Crystal, Goldstein, Allan M
Published in Gastroenterology (New York, N.Y. 1943) (01.04.2017)
Published in Gastroenterology (New York, N.Y. 1943) (01.04.2017)
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