Stacks 2: Analytical methods for paired‐end sequencing improve RADseq‐based population genomics
Rochette, Nicolas C., Rivera‐Colón, Angel G., Catchen, Julian M.
Published in Molecular ecology (01.11.2019)
Published in Molecular ecology (01.11.2019)
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Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
Deiner, Kristy, Bik, Holly M., Mächler, Elvira, Seymour, Mathew, Lacoursière‐Roussel, Anaïs, Altermatt, Florian, Creer, Simon, Bista, Iliana, Lodge, David M., Vere, Natasha, Pfrender, Michael E., Bernatchez, Louis
Published in Molecular ecology (01.11.2017)
Published in Molecular ecology (01.11.2017)
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Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?
Deagle, Bruce E., Thomas, Austen C., McInnes, Julie C., Clarke, Laurence J., Vesterinen, Eero J., Clare, Elizabeth L., Kartzinel, Tyler R., Eveson, J. Paige
Published in Molecular ecology (01.01.2019)
Published in Molecular ecology (01.01.2019)
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The K = 2 conundrum
Janes, Jasmine K., Miller, Joshua M., Dupuis, Julian R., Malenfant, René M., Gorrell, Jamieson C., Cullingham, Catherine I., Andrew, Rose L.
Published in Molecular ecology (01.07.2017)
Published in Molecular ecology (01.07.2017)
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DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions
Zinger, Lucie, Bonin, Aurélie, Alsos, Inger G., Bálint, Miklós, Bik, Holly, Boyer, Frédéric, Chariton, Anthony A., Creer, Simon, Coissac, Eric, Deagle, Bruce E., De Barba, Marta, Dickie, Ian A., Dumbrell, Alex J., Ficetola, Gentile Francesco, Fierer, Noah, Fumagalli, Luca, Gilbert, M. Thomas P., Jarman, Simon, Jumpponen, Ari, Kauserud, Håvard, Orlando, Ludovic, Pansu, Johan, Pawlowski, Jan, Tedersoo, Leho, Thomsen, Philip Francis, Willerslev, Eske, Taberlet, Pierre
Published in Molecular ecology (01.04.2019)
Published in Molecular ecology (01.04.2019)
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Comparing methods for detecting multilocus adaptation with multivariate genotype–environment associations
Forester, Brenna R., Lasky, Jesse R., Wagner, Helene H., Urban, Dean L.
Published in Molecular ecology (01.05.2018)
Published in Molecular ecology (01.05.2018)
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Next‐generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
Valentini, Alice, Taberlet, Pierre, Miaud, Claude, Civade, Raphaël, Herder, Jelger, Thomsen, Philip Francis, Bellemain, Eva, Besnard, Aurélien, Coissac, Eric, Boyer, Frédéric, Gaboriaud, Coline, Jean, Pauline, Poulet, Nicolas, Roset, Nicolas, Copp, Gordon H, Geniez, Philippe, Pont, Didier, Argillier, Christine, Baudoin, Jean‐Marc, Peroux, Tiphaine, Crivelli, Alain J, Olivier, Anthony, Acqueberge, Manon, Le Brun, Matthieu, Møller, Peter R, Willerslev, Eske, Dejean, Tony
Published in Molecular ecology (01.02.2016)
Published in Molecular ecology (01.02.2016)
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Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap
Cordier, Tristan, Alonso‐Sáez, Laura, Apothéloz‐Perret‐Gentil, Laure, Aylagas, Eva, Bohan, David A., Bouchez, Agnès, Chariton, Anthony, Creer, Simon, Frühe, Larissa, Keck, François, Keeley, Nigel, Laroche, Olivier, Leese, Florian, Pochon, Xavier, Stoeck, Thorsten, Pawlowski, Jan, Lanzén, Anders
Published in Molecular ecology (01.07.2021)
Published in Molecular ecology (01.07.2021)
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The long‐standing significance of genetic diversity in conservation
DeWoody, J. Andrew, Harder, Avril M., Mathur, Samarth, Willoughby, Janna R.
Published in Molecular ecology (01.09.2021)
Published in Molecular ecology (01.09.2021)
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Towards a unified paradigm for sequence-based identification of fungi
Kõljalg, Urmas, Nilsson, R. Henrik, Abarenkov, Kessy, Tedersoo, Leho, Taylor, Andy F. S., Bahram, Mohammad, Bates, Scott T., Bruns, Thomas D., Bengtsson-Palme, Johan, Callaghan, Tony M., Douglas, Brian, Drenkhan, Tiia, Eberhardt, Ursula, Dueñas, Margarita, Grebenc, Tine, Griffith, Gareth W., Hartmann, Martin, Kirk, Paul M., Kohout, Petr, Larsson, Ellen, Lindahl, Björn D., Lücking, Robert, Martín, María P., Matheny, P. Brandon, Nguyen, Nhu H., Niskanen, Tuula, Oja, Jane, Peay, Kabir G., Peintner, Ursula, Peterson, Marko, Põldmaa, Kadri, Saag, Lauri, Saar, Irja, Schüßler, Arthur, Scott, James A., Senés, Carolina, Smith, Matthew E., Suija, Ave, Taylor, D. Lee, Telleria, M. Teresa, Weiss, Michael, Larsson, Karl-Henrik
Published in Molecular ecology (01.11.2013)
Published in Molecular ecology (01.11.2013)
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Biodiversity and species competition regulate the resilience of microbial biofilm community
Feng, Kai, Zhang, Zhaojing, Cai, Weiwei, Liu, Wenzong, Xu, Meiying, Yin, Huaqun, Wang, Aijie, He, Zhili, Deng, Ye
Published in Molecular ecology (01.11.2017)
Published in Molecular ecology (01.11.2017)
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How quantitative is metabarcoding: A meta‐analytical approach
Lamb, Philip D., Hunter, Ewan, Pinnegar, John K., Creer, Simon, Davies, Richard G., Taylor, Martin I.
Published in Molecular ecology (01.01.2019)
Published in Molecular ecology (01.01.2019)
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Best practices in metabarcoding of fungi: From experimental design to results
Tedersoo, Leho, Bahram, Mohammad, Zinger, Lucie, Nilsson, R. Henrik, Kennedy, Peter G., Yang, Teng, Anslan, Sten, Mikryukov, Vladimir
Published in Molecular ecology (01.05.2022)
Published in Molecular ecology (01.05.2022)
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Journal Article
Stacks: an analysis tool set for population genomics
Catchen, Julian, Hohenlohe, Paul A., Bassham, Susan, Amores, Angel, Cresko, William A.
Published in Molecular ecology (01.06.2013)
Published in Molecular ecology (01.06.2013)
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Journal Article
A beginner's guide to low‐coverage whole genome sequencing for population genomics
Lou, Runyang Nicolas, Jacobs, Arne, Wilder, Aryn P., Therkildsen, Nina Overgaard
Published in Molecular ecology (01.12.2021)
Published in Molecular ecology (01.12.2021)
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Journal Article
Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods
Hänfling, Bernd, Lawson Handley, Lori, Read, Daniel S., Hahn, Christoph, Li, Jianlong, Nichols, Paul, Blackman, Rosetta C., Oliver, Anna, Winfield, Ian J.
Published in Molecular ecology (01.07.2016)
Published in Molecular ecology (01.07.2016)
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