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Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer: A Joint Consensus Recommendation of the Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists
Li, Marilyn M, Datto, Michael, Duncavage, Eric J, Kulkarni, Shashikant, Lindeman, Neal I, Roy, Somak, Tsimberidou, Apostolia M, Vnencak-Jones, Cindy L, Wolff, Daynna J, Younes, Anas, Nikiforova, Marina N
Published in The Journal of molecular diagnostics : JMD (01.01.2017)
Published in The Journal of molecular diagnostics : JMD (01.01.2017)
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Comparative genomics and community curation further improve gene annotations in the nematode Pristionchus pacificus
Athanasouli, Marina, Witte, Hanh, Weiler, Christian, Loschko, Tobias, Eberhardt, Gabi, Sommer, Ralf J., Rödelsperger, Christian
Published in BMC genomics (12.10.2020)
Published in BMC genomics (12.10.2020)
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The immune cell landscape in kidneys of patients with lupus nephritis
Arazi, Arnon, Rao, Deepak A., Berthier, Celine C., Davidson, Anne, Liu, Yanyan, Hoover, Paul J., Chicoine, Adam, Eisenhaure, Thomas M., Jonsson, A. Helena, Li, Shuqiang, Lieb, David J., Zhang, Fan, Slowikowski, Kamil, Browne, Edward P., Noma, Akiko, Sutherby, Danielle, Steelman, Scott, Smilek, Dawn E., Tosta, Patti, Apruzzese, William, Massarotti, Elena, Dall’Era, Maria, Park, Meyeon, Kamen, Diane L., Furie, Richard A., Payan-Schober, Fernanda, Pendergraft, William F., McInnis, Elizabeth A., Buyon, Jill P., Petri, Michelle A., Putterman, Chaim, Kalunian, Kenneth C., Woodle, E. Steve, Lederer, James A., Hildeman, David A., Nusbaum, Chad, Raychaudhuri, Soumya, Kretzler, Matthias, Anolik, Jennifer H., Brenner, Michael B., Wofsy, David, Hacohen, Nir, Diamond, Betty
Published in Nature immunology (01.07.2019)
Published in Nature immunology (01.07.2019)
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Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
Li, Yun Rose, Glessner, Joseph T., Coe, Bradley P., Li, Jin, Mohebnasab, Maede, Chang, Xiao, Connolly, John, Kao, Charlly, Wei, Zhi, Bradfield, Jonathan, Kim, Cecilia, Hou, Cuiping, Khan, Munir, Mentch, Frank, Qiu, Haijun, Bakay, Marina, Cardinale, Christopher, Lemma, Maria, Abrams, Debra, Bridglall-Jhingoor, Andrew, Behr, Meckenzie, Harrison, Shanell, Otieno, George, Thomas, Alexandria, Wang, Fengxiang, Chiavacci, Rosetta, Wu, Lawrence, Hadley, Dexter, Goldmuntz, Elizabeth, Elia, Josephine, Maris, John, Grundmeier, Robert, Devoto, Marcella, Keating, Brendan, March, Michael, Pellagrino, Renata, Grant, Struan F. A., Sleiman, Patrick M. A., Li, Mingyao, Eichler, Evan E., Hakonarson, Hakon
Published in Nature communications (14.01.2020)
Published in Nature communications (14.01.2020)
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SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways
Park, Jeongsoon, Chen, Yue, Tishkoff, Daniel X., Peng, Chao, Tan, Minjia, Dai, Lunzhai, Xie, Zhongyu, Zhang, Yi, Zwaans, Bernadette M.M., Skinner, Mary E., Lombard, David B., Zhao, Yingming
Published in Molecular cell (27.06.2013)
Published in Molecular cell (27.06.2013)
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High-resolution comparative analysis of great ape genomes
Kronenberg, Zev N., Fiddes, Ian T., Gordon, David, Murali, Shwetha, Cantsilieris, Stuart, Meyerson, Olivia S., Underwood, Jason G., Nelson, Bradley J., Chaisson, Mark J. P., Dougherty, Max L., Munson, Katherine M., Hastie, Alex R., Diekhans, Mark, Hormozdiari, Fereydoun, Lorusso, Nicola, Hoekzema, Kendra, Qiu, Ruolan, Clark, Karen, Raja, Archana, Welch, AnneMarie E., Sorensen, Melanie, Baker, Carl, Fulton, Robert S., Armstrong, Joel, Graves-Lindsay, Tina A., Denli, Ahmet M., Hoppe, Emma R., Hsieh, PingHsun, Hill, Christopher M., Pang, Andy Wing Chun, Lee, Joyce, Lam, Ernest T., Dutcher, Susan K., Gage, Fred H., Warren, Wesley C., Shendure, Jay, Haussler, David, Schneider, Valerie A., Cao, Han, Ventura, Mario, Wilson, Richard K., Paten, Benedict, Pollen, Alex, Eichler, Evan E.
Published in Science (American Association for the Advancement of Science) (08.06.2018)
Published in Science (American Association for the Advancement of Science) (08.06.2018)
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Genome evolution in the allotetraploid frog Xenopus laevis
Session, Adam M., Uno, Yoshinobu, Kwon, Taejoon, Chapman, Jarrod A., Toyoda, Atsushi, Takahashi, Shuji, Fukui, Akimasa, Hikosaka, Akira, Suzuki, Atsushi, Kondo, Mariko, van Heeringen, Simon J., Quigley, Ian, Heinz, Sven, Ogino, Hajime, Ochi, Haruki, Hellsten, Uffe, Lyons, Jessica B., Simakov, Oleg, Putnam, Nicholas, Stites, Jonathan, Kuroki, Yoko, Tanaka, Toshiaki, Michiue, Tatsuo, Watanabe, Minoru, Bogdanovic, Ozren, Lister, Ryan, Georgiou, Georgios, Paranjpe, Sarita S., van Kruijsbergen, Ila, Shu, Shengquiang, Carlson, Joseph, Kinoshita, Tsutomu, Ohta, Yuko, Mawaribuchi, Shuuji, Jenkins, Jerry, Grimwood, Jane, Schmutz, Jeremy, Mitros, Therese, Mozaffari, Sahar V., Suzuki, Yutaka, Haramoto, Yoshikazu, Yamamoto, Takamasa S., Takagi, Chiyo, Heald, Rebecca, Miller, Kelly, Haudenschild, Christian, Kitzman, Jacob, Nakayama, Takuya, Izutsu, Yumi, Robert, Jacques, Fortriede, Joshua, Burns, Kevin, Lotay, Vaneet, Karimi, Kamran, Yasuoka, Yuuri, Dichmann, Darwin S., Flajnik, Martin F., Houston, Douglas W., Shendure, Jay, DuPasquier, Louis, Vize, Peter D., Zorn, Aaron M., Ito, Michihiko, Marcotte, Edward M., Wallingford, John B., Ito, Yuzuru, Asashima, Makoto, Ueno, Naoto, Matsuda, Yoichi, Veenstra, Gert Jan C., Fujiyama, Asao, Harland, Richard M., Taira, Masanori, Rokhsar, Daniel S.
Published in Nature (London) (20.10.2016)
Published in Nature (London) (20.10.2016)
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Human B-cell isotype switching origins of IgE
Looney, Timothy J., Lee, Ji-Yeun, Roskin, Krishna M., Hoh, Ramona A., King, Jasmine, Glanville, Jacob, Liu, Yi, Pham, Tho D., Dekker, Cornelia L., Davis, Mark M., Boyd, Scott D.
Published in Journal of allergy and clinical immunology (01.02.2016)
Published in Journal of allergy and clinical immunology (01.02.2016)
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Assessment of a complete and classified platelet proteome from genome-wide transcripts of human platelets and megakaryocytes covering platelet functions
Huang, Jingnan, Swieringa, Frauke, Solari, Fiorella A., Provenzale, Isabella, Grassi, Luigi, De Simone, Ilaria, Baaten, Constance C. F. M. J., Cavill, Rachel, Sickmann, Albert, Frontini, Mattia, Heemskerk, Johan W. M.
Published in Scientific reports (11.06.2021)
Published in Scientific reports (11.06.2021)
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Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms
Patowary, Ashok, Zhang, Pan, Jops, Connor, Vuong, Celine K., Ge, Xinzhou, Hou, Kangcheng, Kim, Minsoo, Gong, Naihua, Margolis, Michael, Vo, Daniel, Wang, Xusheng, Liu, Chunyu, Pasaniuc, Bogdan, Li, Jingyi Jessica, Gandal, Michael J., de la Torre-Ubieta, Luis
Published in Science (American Association for the Advancement of Science) (24.05.2024)
Published in Science (American Association for the Advancement of Science) (24.05.2024)
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PK-DB: pharmacokinetics database for individualized and stratified computational modeling
Grzegorzewski, Jan, Brandhorst, Janosch, Green, Kathleen, Eleftheriadou, Dimitra, Duport, Yannick, Barthorscht, Florian, Köller, Adrian, Ke, Danny Yu Jia, De Angelis, Sara, König, Matthias
Published in Nucleic acids research (08.01.2021)
Published in Nucleic acids research (08.01.2021)
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The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species
Papanicolaou, Alexie, Schetelig, Marc F., Arensburger, Peter, Atkinson, Peter W., Benoit, Joshua B., Bourtzis, Kostas, Castañera, Pedro, Cavanaugh, John P., Chao, Hsu, Childers, Christopher, Curril, Ingrid, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dolan, Amanda, Dugan, Shannon, Friedrich, Markus, Gasperi, Giuliano, Geib, Scott, Georgakilas, Georgios, Gibbs, Richard A., Giers, Sarah D., Gomulski, Ludvik M., González-Guzmán, Miguel, Guillem-Amat, Ana, Han, Yi, Hatzigeorgiou, Artemis G., Hernández-Crespo, Pedro, Hughes, Daniel S. T., Jones, Jeffery W., Karagkouni, Dimitra, Koskinioti, Panagiota, Lee, Sandra L., Malacrida, Anna R., Manni, Mosè, Mathiopoulos, Kostas, Meccariello, Angela, Murali, Shwetha C., Murphy, Terence D., Muzny, Donna M., Oberhofer, Georg, Ortego, Félix, Paraskevopoulou, Maria D., Poelchau, Monica, Qu, Jiaxin, Reczko, Martin, Robertson, Hugh M., Rosendale, Andrew J., Rosselot, Andrew E., Saccone, Giuseppe, Salvemini, Marco, Savini, Grazia, Schreiner, Patrick, Scolari, Francesca, Siciliano, Paolo, Sim, Sheina B., Tsiamis, George, Ureña, Enric, Vlachos, Ioannis S., Werren, John H., Wimmer, Ernst A., Worley, Kim C., Zacharopoulou, Antigone, Richards, Stephen, Handler, Alfred M.
Published in Genome Biology (22.09.2016)
Published in Genome Biology (22.09.2016)
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GWAS of serum ALT and AST reveals an association of SLC30A10 Thr95Ile with hypermanganesemia symptoms
Ward, Lucas D., Tu, Ho-Chou, Quenneville, Chelsea B., Tsour, Shira, Flynn-Carroll, Alexander O., Parker, Margaret M., Deaton, Aimee M., Haslett, Patrick A. J., Lotta, Luca A., Verweij, Niek, Ferreira, Manuel A. R., Baras, Aris, Hinkle, Gregory, Nioi, Paul
Published in Nature communications (27.07.2021)
Published in Nature communications (27.07.2021)
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The complete mitochondrial genomes of five important medicinal Ganoderma species: Features, evolution, and phylogeny
Li, Qiang, Xiang, Dabing, Wan, Yan, Wu, Qi, Wu, Xiaoyong, Ma, Chengrui, Song, Yue, Zhao, Gang, Huang, Wenli
Published in International journal of biological macromolecules (15.10.2019)
Published in International journal of biological macromolecules (15.10.2019)
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Combining independent de novo assemblies to optimize leaf transcriptome of Persian walnut
Sadat-Hosseini, Mohammad, Bakhtiarizadeh, Mohammad Reza, Boroomand, Naser, Tohidfar, Masoud, Vahdati, Kourosh
Published in PloS one (28.04.2020)
Published in PloS one (28.04.2020)
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Evolutionary history of Tibetans inferred from whole-genome sequencing
Hu, Hao, Petousi, Nayia, Glusman, Gustavo, Yu, Yao, Bohlender, Ryan, Tashi, Tsewang, Downie, Jonathan M., Roach, Jared C., Cole, Amy M., Lorenzo, Felipe R., Rogers, Alan R., Brunkow, Mary E., Cavalleri, Gianpiero, Hood, Leroy, Alpatty, Sama M., Prchal, Josef T., Jorde, Lynn B., Robbins, Peter A., Simonson, Tatum S., Huff, Chad D.
Published in PLoS genetics (27.04.2017)
Published in PLoS genetics (27.04.2017)
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Comparative Functional Genomics of the Fission Yeasts
Rhind, Nicholas, Chen, Zehua, Yassour, Moran, Thompson, Dawn A., Haas, Brian J., Habib, Naomi, Wapinski, Ilan, Roy, Sushmita, Lin, Michael F., Heiman, David I., Young, Sarah K., Furuya, Kanji, Guo, Yabin, Pidoux, Alison, Chen, Huei Mei, Robbertse, Barbara, Goldberg, Jonathan M., Aoki, Keita, Bayne, Elizabeth H., Berlin, Aaron M., Desjardins, Christopher A., Dobbs, Edward, Dukaj, Livio, Fan, Lin, FitzGerald, Michael G., French, Courtney, Gujja, Sharvari, Hansen, Klavs, Keifenheim, Dan, Levin, Joshua Z., Mosher, Rebecca A., Müller, Carolin A., Pfiffner, Jenna, Priest, Margaret, Russ, Carsten, Smialowska, Agata, Swoboda, Peter, Sykes, Sean M., Vaughn, Matthew, Vengrova, Sonya, Yoder, Ryan, Zeng, Qiandong, Allshire, Robin, Baulcombe, David, Birren, Bruce W., Brown, William, Ekwall, Karl, Kellis, Manolis, Leatherwood, Janet, Levin, Henry, Margalit, Hanah, Martienssen, Rob, Nieduszynski, Conrad A., Spatafora, Joseph W., Friedman, Nir, Dalgaard, Jacob Z., Baumann, Peter, Niki, Hironori, Regev, Aviv, Nusbaum, Chad
Published in Science (American Association for the Advancement of Science) (20.05.2011)
Published in Science (American Association for the Advancement of Science) (20.05.2011)
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