IRESite: the database of experimentally verified IRES structures (www.iresite.org)
Mokrejs, Martin, Vopálenský, Václav, Kolenaty, Ondrej, Masek, Tomás, Feketová, Zuzana, Sekyrová, Petra, Skaloudová, Barbora, Kríz, Vítezslav, Pospísek, Martin
Published in Nucleic acids research (01.01.2006)
Published in Nucleic acids research (01.01.2006)
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Journal Article
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation
Fallon, Timothy R, Čalounová, Tereza, Mokrejš, Martin, Weng, Jing-Ke, Pluskal, Tomáš
Published in BMC bioinformatics (04.04.2023)
Published in BMC bioinformatics (04.04.2023)
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Journal Article
Sequencing the genome of bottom brewer's yeast
Pavel DOSTÁLEK, Jan KVASNIČKA, Rudolf CEJNAR, Jaroslav VOHANKA, Martin MOKREJŠ, Jaroslava HÁJKOVÁ, Petra BOBČÍKOVÁ, Tomáš BRÁNYIK, Karel MELZOCH, Karel SEDLÁŘ
Published in Kvasný průmysl (On-line) (01.10.2013)
Published in Kvasný průmysl (On-line) (01.10.2013)
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Journal Article
Genome Fractionation and Loss of Heterozygosity in Hybrids and Polyploids: Mechanisms, Consequences for Selection, and Link to Gene Function
Janko, Karel, Bartoš, Oldřich, Kočí, Jan, Roslein, Jan, Drdová, Edita Janková, Kotusz, Jan, Eisner, Jan, Mokrejš, Martin, Štefková-Kašparová, Eva
Published in Molecular biology and evolution (09.12.2021)
Published in Molecular biology and evolution (09.12.2021)
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Journal Article
IRESite--a tool for the examination of viral and cellular internal ribosome entry sites
Mokrejš, Martin, Mašek, Tomáš, Vopálenský, Václav, Hlubuček, Petr, Delbos, Philippe, Pospíšek, Martin
Published in Nucleic acids research (01.01.2010)
Published in Nucleic acids research (01.01.2010)
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Journal Article
Parasitism as the main factor shaping peptide vocabularies in current organisms
ZEMKOVÁ, MICHAELA, ZAHRADNÍK, DANIEL, MOKREJŠ, MARTIN, FLEGR, JAROSLAV
Published in Parasitology (01.06.2017)
Published in Parasitology (01.06.2017)
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Journal Article
Heterogenous mutation spectrum and deregulated cellular pathways in aberrant plasma cells underline molecular pathology of light-chain amyloidosis
Chyra, Zuzana, Sevcikova, Tereza, Vojta, Petr, Puterova, Janka, Brozova, Lucie, Growkova, Katerina, Filipova, Jana, Zatopkova, Martina, Grosicki, Sebastian, Barchnicka, Agnieszka, Jedrzejczak, Wieslaw Wiktor, Waszczuk-Gajda, Anna, Jungova, Alexandra, Mikulasova, Aneta, Hajduch, Marian, Mokrejs, Martin, Pour, Ludek, Stork, Martin, Harvanova, Lubica, Mistrik, Martin, Mikala, Gabor, Robak, Pawel, Czyz, Anna, Debski, Jakub, Usnarska-Zubkiewicz, Lidia, Jurczyszyn, Artur, Stejskal, Lukas, Morgan, Gareth, Kryukov, Fedor, Budinska, Eva, Simicek, Michal, Jelinek, Tomas, Hrdinka, Matous, Hajek, Roman
Published in Haematologica (Roma) (01.02.2021)
Published in Haematologica (Roma) (01.02.2021)
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Journal Article
Firefly luciferase gene contains a cryptic promoter
Vopálenský, Václav, Masek, Tomás, Horváth, Ondrej, Vicenová, Blanka, Mokrejs, Martin, Pospísek, Martin
Published in RNA (Cambridge) (01.09.2008)
Published in RNA (Cambridge) (01.09.2008)
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Journal Article
Mutational landscape of plasma cell-free DNA identifies molecular features associated with therapeutic response in patients with colon cancer. A pilot study
Cervena, Klara, Pardini, Barbara, Urbanova, Marketa, Vodenkova, Sona, Eva, Pazourkova, Veskrnova, Veronika, Levy, Miroslav, Buchler, Tomas, Mokrejs, Martin, Naccarati, Alessio, Vodicka, Pavel, Vymetalkova, Veronika
Published in Mutagenesis (06.10.2021)
Published in Mutagenesis (06.10.2021)
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Journal Article
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
Martinez, Diego, Challacombe, Jean, Morgenstern, Ingo, Hibbett, David, Schmoll, Monika, Kubicek, Christian P, Ferreira, Patricia, Ruiz-Duenas, Francisco J, Martinez, Angel T, Kersten, Phil, Hammel, Kenneth E, Vanden Wymelenberg, Amber, Gaskell, Jill, Lindquist, Erika, Sabat, Grzegorz, Splinter BonDurant, Sandra, Larrondo, Luis F, Canessa, Paulo, Vicuna, Rafael, Yadav, Jagjit, Doddapaneni, Harshavardhan, Subramanian, Venkataramanan, Pisabarro, Antonio G, Lavín, José L, Oguiza, José A, Master, Emma, Henrissat, Bernard, Coutinho, Pedro M, Harris, Paul, Magnuson, Jon Karl, Baker, Scott E, Bruno, Kenneth, Kenealy, William, Hoegger, Patrik J, Kües, Ursula, Ramaiya, Preethi, Lucas, Susan, Salamov, Asaf, Shapiro, Harris, Tu, Hank, Chee, Christine L, Misra, Monica, Xie, Gary, Teter, Sarah, Yaver, Debbie, James, Tim, Mokrejs, Martin, Pospisek, Martin, Grigoriev, Igor V, Brettin, Thomas, Rokhsar, Dan, Berka, Randy, Cullen, Dan
Published in Proceedings of the National Academy of Sciences - PNAS (10.02.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (10.02.2009)
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Journal Article
The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
Ruepp, Andreas, Zollner, Alfred, Maier, Dieter, Albermann, Kaj, Hani, Jean, Mokrejs, Martin, Tetko, Igor, Güldener, Ulrich, Mannhaupt, Gertrud, Münsterkötter, Martin, Mewes, H. Werner
Published in Nucleic acids research (01.01.2004)
Published in Nucleic acids research (01.01.2004)
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Journal Article
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
Martinez, Diego, Challacombe, Jean, Morgenstern, Ingo, Hibbett, David, Schmoll, Monika, Kubicek, Christian P., Ferreira, Patricia, Ruiz-Duenas, Francisco J., Martinez, Angel T., Kersten, Phil, Hammel, Kenneth E., Vanden Wymelenberg, Amber, Gaskell, Jill, Lindquist, Erika, Sabat, Grzegorz, Splinter BonDurant, Sandra, Larrondo, Luis F., Canessa, Paulo, Vicuna, Rafael, Yadav, Jagjit, Doddapaneni, Harshavardhan, Subramanian, Venkataramanan, Pisabarro, Antonio G., Lavín, José L., Oguiza, José A., Master, Emma, Henrissat, Bernard, Coutinho, Pedro M., Harris, Paul, Magnuson, Jon Karl, Baker, Scott E., Bruno, Kenneth, Kenealy, William, Hoegger, Patrik J., Kües, Ursula, Ramaiya, Preethi, Lucas, Susan, Salamov, Asaf, Shapiro, Harris, Tu, Hank, Chee, Christine L., Misra, Monica, Xie, Gary, Teter, Sarah, Yaver, Debbie, James, Tim, Mokrejs, Martin, Pospisek, Martin, Grigoriev, Igor V., Brettin, Thomas, Rokhsar, Dan, Berka, Randy, Cullen, Dan
Published in Proceedings of the National Academy of Sciences - PNAS (04.02.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (04.02.2009)
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Journal Article
Genome, transcriptome, and secretome analysis of wood decay fungus postia placenta supports unique mechanisms of lignocellulose conversion
Martinez, Diego, Challacombe, Jean F, Misra, Monica, Xie, Gary, Brettin, Thomas, Morgenstern, Ingo, Hibbett, David, Schmoll, Monika, Kubicek, Christian P, Ferreira, Patricia, Ruiz - Duenase, Francisco J, Martinez, Angel T, Kersten, Phil, Hammel, Kenneth E, Vanden Wymelenberg, Amber, Gaskell, Jill, Lindquist, Erika, Sabati, Grzegorz, Bondurant, Sandra S, Larrondo, Luis F, Canessa, Paulo, Vicunna, Rafael, Yadavk, Jagiit, Doddapaneni, Harshavardhan, Subramaniank, Venkataramanan, Pisabarro, Antonio G, Lavin, Jose L, Oguiza, Jose A, Master, Emma, Henrissat, Bernard, Coutinho, Pedro M, Harris, Paul, Magnuson, Jon K, Baker, Scott, Bruno, Kenneth, Kenealy, William, Hoegger, Patrik J, Kues, Ursula, Ramaiva, Preethi, Lucas, Susan, Salamov, Asaf, Shapiro, Harris, Tuh, Hank, Chee, Christine L, Teter, Sarah, Yaver, Debbie, James, Tim, Mokrejs, Martin, Pospisek, Martin, Grigoriev, Igor, Rokhsar, Dan, Berka, Randy, Cullen, Dan
Published in Proceedings of the National Academy of Sciences - PNAS (01.01.2008)
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Published in Proceedings of the National Academy of Sciences - PNAS (01.01.2008)
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